Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq31 118 1e-21 seq209 84.2 3e-11 >seq31 Length=62326 Score = 118 bits (130), Expect = 1e-21 Identities = 366/561 (65%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 112276 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAG 112335 ||||| ||| ||| | | |||||||| || || ||| || |||||||| ||||||| Sbjct 1556 TGTGGCTAGCCATTTTGCAATCTCAAACTGAAACAGGTGGTCCTTATATGCTATACAAAG 1615 Query 112336 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCT 112395 ||||||||||| ||| || ||||| || | || || ||| ||| || | | Sbjct 1616 ACGCCTGTAACACAAAATCAAACCAAAAAAACATCGGGACAATAAAGTCTTCAAATTTGT 1675 Query 112396 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAA 112455 || ||||| | |||| | || ||| || || |||||||| || | || || Sbjct 1676 GTTGCGAAATTGTTGAATATTCATCACCAGAAGAAACTGCTGTGTGCAATTTAGCGTCTC 1735 Query 112456 TCGCTCTCCCCAAGTATGTG-GATCCAGAGA-----CAAAGACATTTGATTATGAAAAAC 112509 | || | || | ||| || | ||| ||| | | ||||||||| ||||||| Sbjct 1736 TTGCATTGCCTACATATTTGAAAACCACAGAGGATGCCATTGCATTTGATTTTGAAAAAT 1795 Query 112510 TCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTT 112569 | ||| || || ||| | |||| || | |||| ||| |||||| || | Sbjct 1796 TGCACTCTGTCACCAAAGTCTTGACAAGGAATTTGAACAAAGTGATTGATGTAACAAAAT 1855 Query 112570 ACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCC 112629 | || ||| | || || | || |||| ||||||||||||||||| | | ||||| | Sbjct 1856 ATCCTGTTAAAACGGCAGAATATTCAAATAAGAGACACCGTCCAATTGCTTTGGGTGTAC 1915 Query 112630 AAGGTCTCGCGGATGTATTCATTCTTTG--TCGCCACGCATTTGATTCCGACGAAGCGAA 112687 |||| | || ||| | || | || | ||| | |||||||| | || || Sbjct 1916 AAGGCTTGGCAGATTTGTT--TGCTGAGCTTCGATTACCTTTTGATTCTGCAATGGCTAA 1973 Query 112688 GGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGC--GAGTTCG 112745 | | ||| | |||||||| || || || || || || |||||||| |||| Sbjct 1974 AACATTAAATATTCAGATATTTGAAACTATATACCATGCTGCACTTGAGGCCTCAGTT-- 2031 Query 112746 GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG 112805 || |||||| | || || ||||||||||| || |||| || || || ||| | ||| Sbjct 2032 GAATTGGCAATGAAAGAGGGCCCATATGAAACATTCCAGGGCTCGCCGGCATCAAATGGG 2091 Query 112806 GTGCTTCAATTTGATATGTGG 112826 | | || |||||||||||| Sbjct 2092 ATATTACAGTTTGATATGTGG 2112 >seq209 Length=22522 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 163547 TATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCG 163606 ||||| |||||||| ||||| || || | |||||||| || ||||| | |||||| Sbjct 9044 TATGGCCGTGTTGCACCACGTTCAGGATTGGCTGTGAAGCATGGTATTTCAACTGGTGCT 8985 Query 163607 GGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGAC 163666 ||||||||||| |||| || |||||||| ||||| || | || ||||| | || Sbjct 8984 GGTGTTATTGACGCCGATTATCGTGGTGAAGTGAAAGTAGTCTTATTTAATCACAGTGAT 8925 Query 163667 AAAGACTTTGA 163677 ||||| || || Sbjct 8924 AAAGATTTCGA 8914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620735478722240