Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq214 96.9 4e-15 >seq214 Length=21991 Score = 96.9 bits (106), Expect = 4e-15 Identities = 263/393 (67%), Gaps = 20/393 (5%) Strand=Plus/Plus Query 154704 GATAAAAGAAATGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAGTG 154761 ||| ||||||| | || ||||| |||| ||| || |||||||| || || || | Sbjct 18334 GATCAAAGAAACATTTGCTTGATTCCAGTTAGT--GCTCATGGAACCAACCCAGCATCAG 18391 Query 154762 CTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACA 154821 | | |||| || |||||||||| ||||| ||| | |||| ||| || Sbjct 18392 CCGCCATGTGTGGATTGAAAGTTGTTCCCGTCAAATGTTTATCTAATGGATCCATTGATT 18451 Query 154822 TCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTG---AACTGTCATGT---ATTA 154875 | ||||| |||| |||||| || |||| || ||| || ||| || | Sbjct 18452 TAGAAGATTTAGAAGCAAAAGCAGCCA--AATA----TGCCAAACAGTTGTGTTCAATAA 18505 Query 154876 TGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATT-AGACAGATATGTAAG 154934 ||||||| ||||||||||| | ||| ||||||| | | || ||| || ||| | | Sbjct 18506 TGATTACTTACCCATCTACGTACGGTTTATTTGAGCCAGGCGTTAAGAAAGCTAT-TGAT 18564 Query 154935 ATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTA 154994 || ||||||| |||||| ||| ||| || | || || ||||| | ||||| || || Sbjct 18565 ATTGTTCATGCCAATGGCGGTTTGGTTTACTTGGACGGTGCAAACATGAATGCCCAAGTC 18624 Query 154995 GGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACA 155054 || || | || |||| | ||||| ||||| |||||| | || | || |||||| Sbjct 18625 GGTTTAACTTCTCCGGGTGATTTGGGTGCCGATGTTTGTCATTTGAATATTCACAAAACA 18684 Query 155055 TTCTGTATT-CCACATGGAGGTGGAGGTCCTGG 155086 || || ||| ||||| ||||| ||||| || Sbjct 18685 TT-TGCATTAAGTCATGGTGGTGGTGGTCCAGG 18716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579206341777280