Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq214 96.9 4e-15
>seq214
Length=21991
Score = 96.9 bits (106), Expect = 4e-15
Identities = 263/393 (67%), Gaps = 20/393 (5%)
Strand=Plus/Plus
Query 154704 GATAAAAGAAATGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAGTG 154761
||| ||||||| | || ||||| |||| ||| || |||||||| || || || |
Sbjct 18334 GATCAAAGAAACATTTGCTTGATTCCAGTTAGT--GCTCATGGAACCAACCCAGCATCAG 18391
Query 154762 CTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACA 154821
| | |||| || |||||||||| ||||| ||| | |||| ||| ||
Sbjct 18392 CCGCCATGTGTGGATTGAAAGTTGTTCCCGTCAAATGTTTATCTAATGGATCCATTGATT 18451
Query 154822 TCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTG---AACTGTCATGT---ATTA 154875
| ||||| |||| |||||| || |||| || ||| || ||| || |
Sbjct 18452 TAGAAGATTTAGAAGCAAAAGCAGCCA--AATA----TGCCAAACAGTTGTGTTCAATAA 18505
Query 154876 TGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATT-AGACAGATATGTAAG 154934
||||||| ||||||||||| | ||| ||||||| | | || ||| || ||| | |
Sbjct 18506 TGATTACTTACCCATCTACGTACGGTTTATTTGAGCCAGGCGTTAAGAAAGCTAT-TGAT 18564
Query 154935 ATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTA 154994
|| ||||||| |||||| ||| ||| || | || || ||||| | ||||| || ||
Sbjct 18565 ATTGTTCATGCCAATGGCGGTTTGGTTTACTTGGACGGTGCAAACATGAATGCCCAAGTC 18624
Query 154995 GGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACA 155054
|| || | || |||| | ||||| ||||| |||||| | || | || ||||||
Sbjct 18625 GGTTTAACTTCTCCGGGTGATTTGGGTGCCGATGTTTGTCATTTGAATATTCACAAAACA 18684
Query 155055 TTCTGTATT-CCACATGGAGGTGGAGGTCCTGG 155086
|| || ||| ||||| ||||| ||||| ||
Sbjct 18685 TT-TGCATTAAGTCATGGTGGTGGTGGTCCAGG 18716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579206341777280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |