Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq57 102 1e-16
>seq57
Length=48952
Score = 102 bits (112), Expect = 1e-16
Identities = 245/360 (68%), Gaps = 8/360 (2%)
Strand=Plus/Minus
Query 104858 ATTCTTAAAGAATTATTATGGGT-GATGAAAGGTTTAACAAATTCTAACTTGTTAAATGA 104916
||| || | |||||||||||| | | || ||| || | || |||| | |||| ||
Sbjct 17572 ATTATTCATGAATTATTATGGTTTGTTGCTGGGTCTA-CTGATGCTAAAATATTAAGCGA 17514
Query 104917 AATTGGTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATT 104976
|| || || ||| | ||| | | ||||| || ||| |||||||||| | |||||
Sbjct 17513 AAAGGGAGTGAAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATT 17454
Query 104977 TCACTT-TCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTG 105035
||| ||| ||||| ||||| |||||| ||||||| || |||||||||||| ||
Sbjct 17453 G-ACTCATCGTCGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTG 17395
Query 105036 GAGCTCAATATATCGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTC 105095
| || |||||| || |||||| | || |||| |||||||| | || || |||
Sbjct 17394 GTGCAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAG 17335
Query 105096 AAGTTATAGAAACTATAAAAAATAACCCCGGGTG-TCGAAGAATAATTATAGATAGTTGG 105154
| ||||| ||| || |||| || || || | ||||||| || || | ||||
Sbjct 17334 ATGTTAT-TAAAAAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGG 17276
Query 105155 AATGTGTCACAATTATCAGATATGGCTCTTCCACCGTGTCAT-TGTTTGGTACAATTTTA 105213
||| || | || | | ||||| | || || |||||| | ||| || ||||||||
Sbjct 17275 AATCCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGT-CAATTTTA 17217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658395858804320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |