Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq57 102 1e-16 >seq57 Length=48952 Score = 102 bits (112), Expect = 1e-16 Identities = 245/360 (68%), Gaps = 8/360 (2%) Strand=Plus/Minus Query 104858 ATTCTTAAAGAATTATTATGGGT-GATGAAAGGTTTAACAAATTCTAACTTGTTAAATGA 104916 ||| || | |||||||||||| | | || ||| || | || |||| | |||| || Sbjct 17572 ATTATTCATGAATTATTATGGTTTGTTGCTGGGTCTA-CTGATGCTAAAATATTAAGCGA 17514 Query 104917 AATTGGTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATT 104976 || || || ||| | ||| | | ||||| || ||| |||||||||| | ||||| Sbjct 17513 AAAGGGAGTGAAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATT 17454 Query 104977 TCACTT-TCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTG 105035 ||| ||| ||||| ||||| |||||| ||||||| || |||||||||||| || Sbjct 17453 G-ACTCATCGTCGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTG 17395 Query 105036 GAGCTCAATATATCGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTC 105095 | || |||||| || |||||| | || |||| |||||||| | || || ||| Sbjct 17394 GTGCAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAG 17335 Query 105096 AAGTTATAGAAACTATAAAAAATAACCCCGGGTG-TCGAAGAATAATTATAGATAGTTGG 105154 | ||||| ||| || |||| || || || | ||||||| || || | |||| Sbjct 17334 ATGTTAT-TAAAAAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGG 17276 Query 105155 AATGTGTCACAATTATCAGATATGGCTCTTCCACCGTGTCAT-TGTTTGGTACAATTTTA 105213 ||| || | || | | ||||| | || || |||||| | ||| || |||||||| Sbjct 17275 AATCCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGT-CAATTTTA 17217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658395858804320