Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq243 383 2e-101
seq38 378 8e-100
seq2 275 7e-69
seq31 250 3e-61
>seq243
Length=19219
Score = 383 bits (424), Expect = 2e-101
Identities = 626/896 (70%), Gaps = 7/896 (1%)
Strand=Plus/Plus
Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728
|||||| || || | ||||||||||||||||||||| || || || | || || ||
Sbjct 8833 TTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAAGAAATGTT 8892
Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788
|||||| |||||||||||||| | ||||| |||| ||| ||| ||||| | || |
Sbjct 8893 TTCCATGAAATCAAATGGATTAGTAACATTGTATACTTTCTTGTTACCTAAGGCCAACAA 8952
Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848
| |||||| || || |||| ||| ||| ||||| | ||| ||||| || | ||
Sbjct 8953 CAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTTCATACCCAACAA 9012
Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
|| || || ||||| |||| | |||| || | || || || || | |||||
Sbjct 9013 GGACACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACATCAACAGCTTCAGTAATAAT 9072
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| |||| | ||| | || || | | | ||| ||||| ||||| |||||
Sbjct 9073 TTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCAAACAATAAACAAGCAAA 9132
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
||| |||| || || ||||| | ||||| || || || || || || || |||||
Sbjct 9133 GTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAAGTCAACCCTGGCAT 9192
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
| ||||| ||||| |||||||| |||||||||||||| ||| |||||| ||||||||
Sbjct 9193 TAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTAAAGAAAATACCTTC 9252
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148
||||| ||||| ||||||| |||||| ||||| || |||| || |||||||||||
Sbjct 9253 AACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCATCATCTTGAATCCATTT 9312
Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208
| ||||| ||||| ||||||| | |||||| || | | || | |||||||| ||
Sbjct 9313 GATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCAATGGCATTAAATAAGTA 9372
Query 19209 CATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267
|| || || | | |||||| | || | || || |||||| ||| |||||||||
Sbjct 9373 -ATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAAGAGTAGGTTTCTGAAT 9431
Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327
|||| ||||| || || || || ||||| || || | ||||| | | || ||||
Sbjct 9432 GAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCTTCGGGAAGTTGAACTT 9491
Query 19328 CACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATG 19387
|| | | || |||| | || |||||| ||| || |||||| ||| || |||||||
Sbjct 9492 CAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCAGAAGCAGCGAAAAATG 9551
Query 19388 CTAATACATGTTTA-ATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAATCATTA 19443
| ||||| | | | | ||||| | |||||| | | ||| ||||||| ||||
Sbjct 9552 CCAATAC-TCTAGAGACAAAATATCTTTCATTTTCATTCAATTTGTTATTCCAGTCATCC 9610
Query 19444 ATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATAC 19503
| ||||||| ||||| | |||||| | ||||| |||||||| || ||||| |||||
Sbjct 9611 AAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTTCTTATAA 9670
Query 19504 ATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559
| |||||| || ||| | ||| || || || || ||| | | | ||| |||||
Sbjct 9671 AAGTTCCAAATTTCATGGTATCTGATTGGGAACATCACATAACGACGTTTGTTTTC 9726
>seq38
Length=58422
Score = 378 bits (418), Expect = 8e-100
Identities = 1454/2276 (64%), Gaps = 72/2276 (3%)
Strand=Plus/Plus
Query 46983 GTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAA 47042
||||| | ||| | | ||| || | || ||||| || ||||||||||||||||| |||
Sbjct 21161 GTAAATTGAATAGCAGCACTGGCAGCTTGTGTTCTCAAGTAATACATACCAGTCTTCAAA 21220
Query 47043 CCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATA 47102
||| |||| ||||||||||||||||| || || ||| | || ||| ||
Sbjct 21221 CCTTTCTTCCAACCATAGAAATGCATACTGGTCAACTTACCCATTGTTGGGTCTTTGATG 21280
Query 47103 TGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAA 47162
||||| || | |||||| ||||||||||||||| |||||||||| ||||| || | |
Sbjct 21281 TGAATGTTTAATGATTGAGATTGATCAATAAATGCAGCTCTATCAGCAGCCATGTCGATA 21340
Query 47163 ATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGA 47222
||| | |||||| || ||||| || || || || | | ||||| || || || |
Sbjct 21341 ATATGCTTTTGTGAGATTTCCCAGACAGTCTTGTACAATGCCTTAATTTCATCAGGAATG 21400
Query 47223 TTAGT---ATTTTGAATAGATCCTCCgttttctataattttgttttttaattcatttgac 47279
|| | | ||||||||| || ||| | ||||| | |||| | ||| |
Sbjct 21401 TTTGGCAAAGCTTGAATAGAACCGTTGTTAGCAATAATACTACTTTTCATAGCATCATTC 21460
Query 47280 caaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCA 47339
|| | ||| || || || | || ||||| |||||||||||||||||
Sbjct 21461 CAGACACCCAAATCAACCAAATCCTTCAACAAATATGGATTGACAATTTGAAATTCTCCT 21520
Query 47340 GATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCA 47399
| || ||||| | | || || ||| || |||||||| | | | ||||| || ||
Sbjct 21521 GCTAACACTCTTCTGGAGTAAATGTTAGAAGTGTATGGTTCGAAACACTCATTGTTACCC 21580
Query 47400 AAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCA 47459
|||||||| | || || || |||||||| | |||||||||||| ||||| | |||
Sbjct 21581 AAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCAACTAATAAGGAGTTTCTCATACCA 21640
Query 47460 TATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTC 47519
| || | | | ||||||||| | || | ||| |||
Sbjct 21641 TGCTTAGCCAAATTTTGTTTTAATGTATCCCAATCCCATAATTCAGTTGGTTTTCTGTTC 21700
Query 47520 CAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGA 47579
|| |||||| | || | | |||| | || || || ||| |||| || | |
Sbjct 21701 CATAAATCAAACTGTAATAAACCTTGAGAGGCAGGGGAGCCTGGATAAGTTTCGTAGGCA 21760
Query 47580 CCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAAT 47639
|| | | |||||| | |||| | ||||| | ||| || || || || || ||
Sbjct 21761 CCTTCTTCTTTAGCCAATTCAACAGAAGCTTCAACAGCAGCATGGTAAATAGTCTCGAAA 21820
Query 47640 ATTTTTATGTTTAGATTC-CTTGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAA 47698
|||| ||||||| |||| || |||||| || ||||| || | ||
Sbjct 21821 ATTTGAATGTTTA-ATTCTCTGGCTTCTTGGGAGTCAAATGGTAATCTCAATTCCATAAA 21879
Query 47699 TGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTC 47758
| ||| ||||| ||||||||||| | | |||||||||| || | |||| || ||
Sbjct 21880 GGCATCAGCCAAACCTTGAACACCCAAAGCAATTGGTCTGTGTCTCATATTTGATCTTTC 21939
Query 47759 AGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAG---ANNNNNNNNNNN 47815
|||||||| | ||| || | ||| || |||| | | || | |
Sbjct 21940 GGCTTCTGGAACTGGGTAATGGTTGCGGTCAATAACTCTGTTCAAGTTACGGGTGACTAC 21999
Query 47816 NNNNNNNACAATTTCTCTTAATTTATTAAAAT-----CAA-----ACTTGTTAT---TTA 47862
||| || ||| |||| ||| | ||| |||| | || ||
Sbjct 22000 CTTGGTGACA---TCATGTAACTTATCAAAGTTGTACCAAGTATTACTT-TGATCGCTTT 22055
Query 47863 TAACAAACC-TATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTA 47921
|||||| | ||| || || || || | ||||| ||||| || |||| |||| |
Sbjct 22056 CAACAAATGATGGTAAA-GCAATGGAGGCCAAGTTACAAACAGCGACTTCATCTGGAGCA 22114
Query 47922 GTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGA 47981
| ||||| | |||||| ||||| || | |||| ||| ||||||| || | ||
Sbjct 22115 GAATATTCAACAATTTCACAACATAAGTTGGAAGATTTAATAATACCCAAGTTCTTTTGG 22174
Query 47982 TT--ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCT 48039
|| ||| |||||||||| || ||||| | |||||| || || || |||||| | |
Sbjct 22175 TTGGATTTG--TTGTTACATGAATCTTTGTACAACATAAATGGAGTACCCGTTTCTGTTT 22232
Query 48040 GAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTAT 48099
| | | | | ||||| | ||| | | ||||| || ||| | || |
Sbjct 22233 GGGCTCCCAAGATAGCGTACCACAATTTTTGGGCCTTGATGGTCTGTCTGCCACGGTTTT 22292
Query 48100 CATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAG 48159
| | ||||||| | |||||||| | || ||||| || || || |||| | | || || |
Sbjct 22293 CTTTTTCGTATCTGGTATATAATTCTTCGAATTCGTCACCGTAAACATCAGCCAAACCTG 22352
Query 48160 GACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATA 48219
| ||||| || | | ||| | |||||| | | | || ||||| |||| || |
Sbjct 22353 GGGCCTCATTTGGTGAGAACAAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAACA 22412
Query 48220 TATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTAT 48279
||||| ||||| | |||| || ||||| || | ||| | |||||| || ||| ||
Sbjct 22413 AGTCTGGAATCCATAAAGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTACCATGAT 22472
Query 48280 TCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCA 48339
|| || | | |||| || || | || ||| |||||||||||||| || | || |
Sbjct 22473 TCTTTCTGATGTCAATGAAATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGCAA 22532
Query 48340 TTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTC 48399
|||| |||| ||| ||||| |||||||| | ||| | ||||| || || | ||||
Sbjct 22533 AGGCACCAGGTCTTTTGTTACCACCTTGATCAACATAACGTGCAGTGTTATTGAACACTC 22592
Query 48400 TTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAG 48459
||| |||||| | ||||||||| || |||||||||| || | ||| ||| ||| |||
Sbjct 22593 TTACCATTGGAATAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCAGTAG 22652
Query 48460 CTCTTATATTACTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACAC 48518
| || || || || || ||| || || ||||| |||| || || | |||||||
Sbjct 22653 AACGAATGTTGTGGATATGTAA-ACCAATCCCTCCTGCACTTTTTGAAATCAAAGCACAC 22711
Query 48519 CGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAA 48578
||| | |||||||| || ||||| ||| |||||| ||||| | | || ||
Sbjct 22712 GATTTTAAAGTATCATATATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAGCAT 22771
Query 48579 CTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAAC 48638
||||||||| || || || | ||| || || ||||| |||| ||||
Sbjct 22772 GAAGACATTTGGGGTCTTGGTGTACCAGCATTGAACAAGCAAGGAGAACCATGGGTAAAG 22831
Query 48639 CATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATT--GATGTA 48696
|| | | || | ||| ||||| |||||||| || ||||| |||| || |
Sbjct 22832 AATCTTTGAGACATCAAGTTATAGGTTTCAATGACTCTTGGTATAT--CATTACCGTGGA 22889
Query 48697 TACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTT 48756
|||| | || || | ||| | || || ||| |||||||| ||| || || ||
Sbjct 22890 TACCAACAGCGACTCTCATGATCAAATGTTGGGGTCTTTCGGCAACCTTACCGTTGATAC 22949
Query 48757 TCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTAT 48816
|| | ||| ||| ||||||| ||||| || |||||||| ||||| ||| || | |
Sbjct 22950 GTAACAAATAAGATCTTTCCAAAGTTTTGAACCCAAAATAATTGTAGCTAAAATCTCTGT 23009
Query 48817 CATTAATAATTGATGAATTTATTCTTTCCTTATGTTTATATACTACATCCATTACATTT- 48875
| | || ||| | || |||| | || | || || ||| || || || |||
Sbjct 23010 CGTAAACAATGGCCGAGTTTAATTCATCTTCGTG-TTCCATAATA-ATGTCATAGGTTTC 23067
Query 48876 -TTTGATATAATTG-------------ATTCCTTG--TAAAGAT-CTTCTACAACATCAC 48918
|| || || || | | || | | | || || || || || |||
Sbjct 23068 CTTGGAAATCATAGGAGAGTGCAACCCAGTCTTAGGATTAATATACTCATATAA-ATCCT 23126
Query 48919 TAAATAtttt---------tt---ttGTTTCTTTATGAAGATTAGATATAGATATTCTAG 48966
|| ||| ||| || | |||| || || | ||| |||| | |||||||
Sbjct 23127 TAGATACTTTGGAATACTGTTTGGTGGTTTGCTTGTGTAAATTTGATACGGCAATTCTAG 23186
Query 48967 CAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTA 49026
| ||||| | ||||||||| |||||||||||||| |||| || |||||||| || |
Sbjct 23187 CGGCTAACACAGCATAATCAGGATGAATTGTTGTCATTGTAGCAGCAATTTCTGCAGCCA 23246
Query 49027 ATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATTGCTA 49086
| |||| || || ||||||| || || || | ||| |||||||| | |
Sbjct 23247 AGTTATCCAACTCGATAGTAGTAACCCCCTGGTAAACACCTGATATAACTTTTTGGGTAA 23306
Query 49087 TATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGATG 49146
|| ||||| || | |||| || | || ||||||||| ||| | ||||| |
Sbjct 23307 TAGCAACTGGTTCAACGTGATTTGGATTTAAACCGTAACATAATCTTTGAACTCTAGCGG 23366
Query 49147 TAATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTTTAT-AACAAACAT 49201
| ||||| ||||| || ||||||||| || || | | |||| |||| ||||
Sbjct 23367 TGATTTTGTCAAAACGTACTGGCTCTTTACGGCCATCTC-TCTTATAAACATACAT 23421
>seq2
Length=135431
Score = 275 bits (304), Expect = 7e-69
Identities = 598/889 (67%), Gaps = 11/889 (1%)
Strand=Plus/Plus
Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716
|||||| || ||||| || || | |||||| |||||||||||||||||||| || |
Sbjct 59348 CATTACACCGGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGC 59407
Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCC 18776
|| || ||| |||||| |||||||||||||| | ||||| || ||||| |||
Sbjct 59408 CAAGGAGATATTTTCCATGAAATCAAATGGATTAGTAACATTGTAATACTTTTTATTTCC 59467
Query 18777 TAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATT 18836
|| | | || || || ||| || ||||||| || ||| | ||||| ||||||||
Sbjct 59468 AAAGGCCACTAATAATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATT 59527
Query 18837 CATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGC 18896
|||||| | ||| || || || ||||| | | | ||| || || ||| | || ||
Sbjct 59528 CATTCCCAATAAAGATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGC 59587
Query 18897 CTCTGATATAATAGATACAACTCTATCTTCATTAGG---AGGGTATAGAAGATGTTTAAA 18953
||| | || || ||| | ||| | ||| | | || || | | ||
Sbjct 59588 CTCGGTAATGATTTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTA-AATACGAG--AA 59644
Query 18954 CATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAA 19013
| |||||| ||| |||| || | || ||||||| | ||||||||||| |||||
Sbjct 59645 TAACAAACAGGCATAATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAA 59704
Query 19014 TGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGA 19073
||| || || ||||||| || ||||| ||||||||||| || | ||||| || |||
Sbjct 59705 TGTCAATCCTGGCATCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACT 59764
Query 19074 AAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATT 19133
|| ||||||||||| || || ||||| ||||| | ||| || |||| |||||| |
Sbjct 59765 GAAAAATATACCTTCAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTC 59824
Query 19134 ATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTAT 19193
| |||||||| | | |||||||| || || | | | | |||| || | || ||
Sbjct 59825 GTCTTGAATCCACCTGATGGCCCAATCGGCTTTTTCTCTGATGAATGGGATATTTTCAAT 59884
Query 19194 AGAATTAAATAGATACATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAAC 19252
|| |||||| | | | | ||| || |||| || || | |||| || || || ||
Sbjct 59885 AGCATTAAACA-AAAAGTCCGCTTCTTCTGGGTCCTTGAAGTATGTTTCGATTAACAACG 59943
Query 19253 TGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 19312
|| | |||||||| || ||||| || |||||||| ||| | | || |
Sbjct 59944 AATAAGTCTCTGAATGGATGTTTTCCATCATGATCTGAAACTTGTATACCAGTTGAGCCT 60003
Query 19313 CTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCAC 19372
||| ||| ||||||||| ||| || |||| ||||| || ||||| || || |||||
Sbjct 60004 CTGGTATTTGTACTTCAGCACAGAAATTTTCCACCAAGTTCTCATTGACAATACCATCCG 60063
Query 19373 TAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTA- 19431
|| ||||| ||||| || || | || ||| | |||||| | | | | | ||
Sbjct 60064 AGGCAGCAAAGAATGCCAACACTCGGGAGATGAAAAATCTTTCATTTTCGTTCATTTTAT 60123
Query 19432 --TTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCT 19489
||||| || | ||||||| ||| || | |||||| |||||||||| || |||
Sbjct 60124 TGTTCCAGTCGGCCAAATCTTTACTTAAGTCAAGCTCTTCAGCTGTCCAAAACGAGGCCA 60183
Query 19490 CTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATAT 19538
| ||||| || | | ||||| || |||| | |||||| ||||
Sbjct 60184 ACGACTTTTTGTAGAATTGCCATAACTCCGGATACTTAATAGGATATAT 60232
>seq31
Length=62326
Score = 250 bits (276), Expect = 3e-61
Identities = 480/697 (69%), Gaps = 8/697 (1%)
Strand=Plus/Minus
Query 48104 TTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACA 48163
||| ||||| |||||| || |||||||| || |||||||| | | || ||| ||
Sbjct 1518 TTCATATTTGCAATATAATTTTTCAAATTCCTCACCATACACGTCACTTAGACCAAGAGC 1459
Query 48164 TTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATC 48223
|||||| || | | ||| | ||| || || | ||| || | ||||||| | ||
Sbjct 1458 TTCATTGGGCGAAAACAAAGTCCAGTCAGAATTGTCTTTCACACGTTTCATAAACAAGTC 1399
Query 48224 TGGTATCCAAAGAGCTATAAAT-AAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCC 48282
|||||||| | | | ||||| ||||| |||||||| | ||||||||| || |||
Sbjct 1398 GGGTATCCATA-ATCCATAAAACAAATCTCTAGTTCTCATTTCTTCATTCCCGTGATTTT 1340
Query 48283 TTTTAAGTTC-AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATT 48341
|| | | ||| |||| | || | |||||| ||||||||||||||| |||||| || | |
Sbjct 1339 TTCTCATTTCTAAGATA-TCAAAAATATCACCATGCCATGGTTCTATATATATGGCAAAT 1281
Query 48342 ACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTT 48401
| ||||| |||||| || |||||||| | |||||| |||||||| || ||||| |
Sbjct 1280 GCTCCTGGACGTTTACCCCCACCTTGATCGACATATCTTGCAGTATTATTGTAAACACGC 1221
Query 48402 AACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCT 48461
||||| || || | || ||||| |||||||||| || | |||||| ||| | | |
Sbjct 1220 AACATGGGTACTAACCCGTTTGAACTACCATTGGTGCCAGCAATATACGCACCATTGGAT 1161
Query 48462 CTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGT 48521
|| ||||| | ||||||||| || |||| || || |||||||| |
Sbjct 1160 CTAATATTGTGCACATGAATACCTATTCCTCCTGATGCCTTGGAAATTAGAGCCGCCTCA 1101
Query 48522 TTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581
||||| || | | || || || || ||| ||| |||| || ||| |||||
Sbjct 1100 TTAAGAGTCTTGAATATCCCATCGATTGAATCTTCTTTCATGGCTACTAGGAAACATGAT 1041
Query 48582 GA-CATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGG-AGATGCATGAATAAACC 48639
|| | | | || | | | || | |||| ||||||| || ||| |||||||||||
Sbjct 1040 GATAAATAGTTGAATTC-ACTACCAGCATTATATAATGTAGGCAGA-GCATGAATAAAGT 983
Query 48640 ATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATAC 48699
| |||| || | || | ||||||||| | || | || | ||| || || || |
Sbjct 982 ACTTCTGGGACATTAAGTCATATGTTTCCACAATGGCATTCAAATCGTTCTGGTGAATTC 923
Query 48700 CTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCA 48759
|||| | ||||||||| || | ||| || || |||| ||| || | ||||| |
Sbjct 922 CTATGGCTACACGCATGAATAAATACTGGGGCAATTCAGCAACTTCACCACCCATTTTTA 863
Query 48760 AAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796
|||| ||||| ||||||||||||||| ||||||||
Sbjct 862 AAAGGTATGAGCTTTCCAATGTTTTAATCCCAAAATA 826
Score = 138 bits (152), Expect = 1e-27
Identities = 325/480 (68%), Gaps = 23/480 (5%)
Strand=Plus/Minus
Query 47004 GCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAA 47063
|||| || |||||||| ||||||||||||||| || || || ||| |||| ||
Sbjct 2630 GCTGCTTGTGTTCGTAGATAATACATACCAGTTTTCAACCCCTTTTCCCAAGCATAAAAG 2571
Query 47064 TGCATACTAGTTAATTTAGAATAACTAGG-TTCTGAAATATGAATATTAAGAGATTGACT 47122
|| ||||||||| || | |||| || | || || ||||| | | |||
Sbjct 2570 TGACAACTAGTTAACTTGCCAATTGTAGGATTACGCAA-GTGTATATTCATACTTTGCAG 2512
Query 47123 CTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTC 47182
||||||| |||| |||||||| || |||||||| | || || |||||| | ||
Sbjct 2511 TTGATCAACAAATTTTCCTCTATCTGCAGCCATATCAATGATCACTTTTTGTGACAATTC 2452
Query 47183 CCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAG---TATTTTGAATAGA 47239
||| || |||||||| | |||||| || || || || | ||| | | |||||||| ||
Sbjct 2451 CCACACGGTTTTATATAATTGTTTGATTTCGTCAGGTATATTGGGTATTTTTTGAATTGA 2392
Query 47240 TCCTCCgttttctataattttgttttttaattcat--ttga---ccaaagttttcg-ttc 47293
||| ||||| ||||| | || ||| |||| ||| ||||| | | | |
Sbjct 2391 ---TCCATTTTCCATAATAATCTTATTT--CTCATAGCTGAATCCCAAATTCCAAGATCC 2337
Query 47294 agttaatgttt--ttaaA-AGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCT 47350
| | ||| ||| ||||| | || || ||||||||| ||||||| | || ||||
Sbjct 2336 ATTAAATCTTTAATTAAATACTTG----TTGACAATTTGATATTCTCCCGCTAACACTCG 2281
Query 47351 ACGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGC 47410
||| |||| | || ||||| || || | ||||||| ||||| |||||| |
Sbjct 2280 ACGATTATACAAGTTTGAAGTATAAGGCTCAAAGCATTCATTGAATCCAAGAATTTGGGA 2221
Query 47411 AGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTAT 47470
||||||||| || ||||| | || |||| ||| ||||||| ||| | ||||| ||
Sbjct 2220 AGTTGATGCCGTCGGCATCGGAGCTACTAGTAATGAGTTTCTTAAACCAAAATTTTGAAT 2161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562102532486880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |