Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq243 250 3e-61
seq2 161 1e-34
>seq243
Length=19219
Score = 250 bits (276), Expect = 3e-61
Identities = 562/838 (67%), Gaps = 21/838 (3%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
|||||| || |||||| || ||| ||||| | |||| || ||||| ||||| || |
Sbjct 8821 CATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGC 8880
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA---TAGTACTACA 36988
| || || |||||||| |||||||||||||||| ||| |||| | | |||
Sbjct 8881 CAAAGAAATGTTTTCCATGAAATCAAATGGATTAGTAACATTGTATACTTTCTTGTTACC 8940
Query 36989 TGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATA 37048
| || || || | ||||| || || ||||| ||||||| |||||| | | | |
Sbjct 8941 T---AAGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACA 8997
Query 37049 GTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCT-ATTATTA 37107
||| ||||| | | ||||||| ||||| || | || | ||||| | || |
Sbjct 8998 GTTCATACCCAACAAGGACACTGGAAGAGCATCGGTAA--AGTACTCTTTCTCAACATCA 9055
Query 37108 -CAGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTA 37166
|||| || ||| || || ||| || ||| || ||| | || |||| |
Sbjct 9056 ACAGCTTCAGTAATAATTTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCA 9115
Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226
||||||||||| ||||| ||| ||||||||||||||||| | ||||| || || ||
Sbjct 9116 AACAATAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAG 9175
Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286
|| || || ||||||||||||||||| ||||| | ||| || || | ||||| || |||
Sbjct 9176 AAAGTCAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCA 9235
Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346
||||||||||||||||||||| ||||| || || | | | ||| | | |
Sbjct 9236 CTAAAGAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCA 9295
Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406
| ||| ||||||||| | | ||| || || || || || |||| ||| | ||
Sbjct 9296 TCATCTTGAATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCA 9355
Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466
|| || || || | | | ||||| | |||| |||| ||||| ||||||| ||||
Sbjct 9356 ATGGCATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAA 9415
Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526
|| |||| || ||||| ||||| || || || ||||| || || | | |||
Sbjct 9416 GAGTAGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCT 9475
Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586
|| | | |||||| || | | || | | | |||||||||| ||| || ||||||
Sbjct 9476 TCGGGAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCA 9535
Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTT----ATAAAATGTCTTTCA---TCATTTGA 37639
||| || || || || | ||| | | | ||||| ||||||| ||||| |
Sbjct 9536 GAAGCAGCGAAAAATGCCA----ATACTCTAGAGACAAAATATCTTTCATTTTCATTCAA 9591
Query 37640 TAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697
| || ||||| |||| | |||||| ||||| | ||| || ||||||| |||
Sbjct 9592 TTTGTTATTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAA 9649
>seq2
Length=135431
Score = 161 bits (178), Expect = 1e-34
Identities = 306/447 (68%), Gaps = 20/447 (4%)
Strand=Plus/Plus
Query 36885 TTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTT 36944
||||| || || ||||| |||| || ||||| || || || | | || ||||||
Sbjct 59361 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAGATATTT 59420
Query 36945 TCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCT----- 36999
||||| |||||||||||||||| || | || ||| ||| | || ||||
Sbjct 59421 TCCATGAAATCAAATGGATTAG------TA-ACATTGTAATACTTTTTATTTCCAAAGGC 59473
Query 37000 ---TCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATAC 37056
| | || | ||| ||||||||||| | || | ||||| | ||| | || || |
Sbjct 59474 CACTAATAATCG-ATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTC 59532
Query 37057 CAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCT--ATTATTACAGCATC 37114
| | || |||||||| ||||| | |||||| ||||||| || | ||||| ||
Sbjct 59533 CCAATAAAGATACTGGAAGCGCATC--GCTGAAATATTTTTTCTCAATAGTCACAGCCTC 59590
Query 37115 TTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAA 37174
||| || || |||| | |||| || || || |||||||| || || ||
Sbjct 59591 GGTAATGATTTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAA 59650
Query 37175 ACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAA 37234
||| ||| |||| || | ||||| |||| | ||||||||||| ||||| || ||
Sbjct 59651 ACAGGCATAATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAA 59710
Query 37235 TCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAA 37294
||||||||| || || ||||| || | ||| || ||||||||||| || ||| || ||
Sbjct 59711 TCCTGGCATCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAA 59770
Query 37295 AATACCTTCAACTGCTGCAAATGCTAC 37321
||||||||||| || ||||| || ||
Sbjct 59771 TATACCTTCAACGGCAGCAAACGCAAC 59797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592310195667680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |