Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq243 250 3e-61 seq2 161 1e-34 >seq243 Length=19219 Score = 250 bits (276), Expect = 3e-61 Identities = 562/838 (67%), Gaps = 21/838 (3%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||||| || ||| ||||| | |||| || ||||| ||||| || | Sbjct 8821 CATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGC 8880 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA---TAGTACTACA 36988 | || || |||||||| |||||||||||||||| ||| |||| | | ||| Sbjct 8881 CAAAGAAATGTTTTCCATGAAATCAAATGGATTAGTAACATTGTATACTTTCTTGTTACC 8940 Query 36989 TGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATA 37048 | || || || | ||||| || || ||||| ||||||| |||||| | | | | Sbjct 8941 T---AAGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACA 8997 Query 37049 GTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCT-ATTATTA 37107 ||| ||||| | | ||||||| ||||| || | || | ||||| | || | Sbjct 8998 GTTCATACCCAACAAGGACACTGGAAGAGCATCGGTAA--AGTACTCTTTCTCAACATCA 9055 Query 37108 -CAGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTA 37166 |||| || ||| || || ||| || ||| || ||| | || |||| | Sbjct 9056 ACAGCTTCAGTAATAATTTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCA 9115 Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 ||||||||||| ||||| ||| ||||||||||||||||| | ||||| || || || Sbjct 9116 AACAATAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAG 9175 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 || || || ||||||||||||||||| ||||| | ||| || || | ||||| || ||| Sbjct 9176 AAAGTCAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCA 9235 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 ||||||||||||||||||||| ||||| || || | | | ||| | | | Sbjct 9236 CTAAAGAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCA 9295 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 | ||| ||||||||| | | ||| || || || || || |||| ||| | || Sbjct 9296 TCATCTTGAATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCA 9355 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 || || || || | | | ||||| | |||| |||| ||||| ||||||| |||| Sbjct 9356 ATGGCATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAA 9415 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 || |||| || ||||| ||||| || || || ||||| || || | | ||| Sbjct 9416 GAGTAGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCT 9475 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 || | | |||||| || | | || | | | |||||||||| ||| || |||||| Sbjct 9476 TCGGGAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCA 9535 Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTT----ATAAAATGTCTTTCA---TCATTTGA 37639 ||| || || || || | ||| | | | ||||| ||||||| ||||| | Sbjct 9536 GAAGCAGCGAAAAATGCCA----ATACTCTAGAGACAAAATATCTTTCATTTTCATTCAA 9591 Query 37640 TAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 | || ||||| |||| | |||||| ||||| | ||| || ||||||| ||| Sbjct 9592 TTTGTTATTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAA 9649 >seq2 Length=135431 Score = 161 bits (178), Expect = 1e-34 Identities = 306/447 (68%), Gaps = 20/447 (4%) Strand=Plus/Plus Query 36885 TTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTT 36944 ||||| || || ||||| |||| || ||||| || || || | | || |||||| Sbjct 59361 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAGATATTT 59420 Query 36945 TCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCT----- 36999 ||||| |||||||||||||||| || | || ||| ||| | || |||| Sbjct 59421 TCCATGAAATCAAATGGATTAG------TA-ACATTGTAATACTTTTTATTTCCAAAGGC 59473 Query 37000 ---TCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATAC 37056 | | || | ||| ||||||||||| | || | ||||| | ||| | || || | Sbjct 59474 CACTAATAATCG-ATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTC 59532 Query 37057 CAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCT--ATTATTACAGCATC 37114 | | || |||||||| ||||| | |||||| ||||||| || | ||||| || Sbjct 59533 CCAATAAAGATACTGGAAGCGCATC--GCTGAAATATTTTTTCTCAATAGTCACAGCCTC 59590 Query 37115 TTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAA 37174 ||| || || |||| | |||| || || || |||||||| || || || Sbjct 59591 GGTAATGATTTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAA 59650 Query 37175 ACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAA 37234 ||| ||| |||| || | ||||| |||| | ||||||||||| ||||| || || Sbjct 59651 ACAGGCATAATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAA 59710 Query 37235 TCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAA 37294 ||||||||| || || ||||| || | ||| || ||||||||||| || ||| || || Sbjct 59711 TCCTGGCATCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAA 59770 Query 37295 AATACCTTCAACTGCTGCAAATGCTAC 37321 ||||||||||| || ||||| || || Sbjct 59771 TATACCTTCAACGGCAGCAAACGCAAC 59797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592310195667680