Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq31 197 7e-46
seq38 179 2e-40
>seq31
Length=62326
Score = 197 bits (218), Expect = 7e-46
Identities = 213/282 (76%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||| || || || ||||| | | ||||||| |||||||| | |||||||||||| ||
Sbjct 1410 CATAAACAAGTCGGGTATCCATAATCCATAAAACAAATCTCTAGTTCTCATTTCTTCATT 1351
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|||||||| ||| | | ||||||| |||||||||||| ||||||||||||| |||
Sbjct 1350 CCCGTGATTTTTTCTCATTTCTAAGATATCAAAAATATCACCATGCCATGGTTCTATATA 1291
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
|| ||||| ||| | ||| || ||||||||||| || ||||||||||| | |||
Sbjct 1290 TATGGCAAATGCTCCTGGACGTTTACCCCCACCTTGATCGACATATCTTGCAGTATTATT 1231
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172
| |||| |||||| || ||||| || ||||| || || |||| | ||| | |
Sbjct 1230 GTAAACACGCAACATGGGTACTAACCCGTTTGAACTACCATTGGTGCCAGCAATATACGC 1171
Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACC 26214
|| | |||||||||| ||| |||||||||| ||||| ||
Sbjct 1170 ACCATTGGATCTAATATTGTGCACATGAATACCTATTCCTCC 1129
>seq38
Length=58422
Score = 179 bits (198), Expect = 2e-40
Identities = 298/426 (70%), Gaps = 6/426 (1%)
Strand=Plus/Plus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
|||||| |||| ||| ||||||| | ||||| || ||| | | ||| || || |||||
Sbjct 22360 ATTTGGTGAGAACAAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAACAAGTCTGG 22419
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||| | || || |||||||| ||||| ||||||||||| || ||||||||| |
Sbjct 22420 AATCCATAAAGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTACCATGATTCTTTCT 22479
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
| || | ||||||||| || || ||||||||||||||| || | ||||| |||
Sbjct 22480 GATGTCAATGAAATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGCAAAGGCACC 22539
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
|||||| ||||||||||| || || | |||||| | |||||| ||| | | |||
Sbjct 22540 AGGTCTTTTGTTACCACCTTGATCAACATAACGTGCAGTGTTATTGAACACTCTTACCAT 22599
Query 26128 TGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
||||| |||| ||| | ||| || || || | | ||| | | || || || | ||
Sbjct 22600 TGGAA-TAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCAGTAGAACGAA 22658
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA--ATCTGA 26244
| | ||| ||| | ||| || || || || | ||||||||| ||||| || | |
Sbjct 22659 TGTTGTGGATATGTAAACCAATCCCTCCTGCACTTTTTGAAATCAAAGCACACGATTTTA 22718
Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304
|| ||||| | || |||| || |||| | ||||| | | || || || |||||
Sbjct 22719 AA--GTATCATATATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAGCATGAAGA 22776
Query 26305 TAATTG 26310
| |||
Sbjct 22777 CATTTG 22782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253037249138900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |