Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq31 197 7e-46 seq38 179 2e-40 >seq31 Length=62326 Score = 197 bits (218), Expect = 7e-46 Identities = 213/282 (76%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| || || || ||||| | | ||||||| |||||||| | |||||||||||| || Sbjct 1410 CATAAACAAGTCGGGTATCCATAATCCATAAAACAAATCTCTAGTTCTCATTTCTTCATT 1351 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 |||||||| ||| | | ||||||| |||||||||||| ||||||||||||| ||| Sbjct 1350 CCCGTGATTTTTTCTCATTTCTAAGATATCAAAAATATCACCATGCCATGGTTCTATATA 1291 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || ||||| ||| | ||| || ||||||||||| || ||||||||||| | ||| Sbjct 1290 TATGGCAAATGCTCCTGGACGTTTACCCCCACCTTGATCGACATATCTTGCAGTATTATT 1231 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 | |||| |||||| || ||||| || ||||| || || |||| | ||| | | Sbjct 1230 GTAAACACGCAACATGGGTACTAACCCGTTTGAACTACCATTGGTGCCAGCAATATACGC 1171 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACC 26214 || | |||||||||| ||| |||||||||| ||||| || Sbjct 1170 ACCATTGGATCTAATATTGTGCACATGAATACCTATTCCTCC 1129 >seq38 Length=58422 Score = 179 bits (198), Expect = 2e-40 Identities = 298/426 (70%), Gaps = 6/426 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 |||||| |||| ||| ||||||| | ||||| || ||| | | ||| || || ||||| Sbjct 22360 ATTTGGTGAGAACAAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAACAAGTCTGG 22419 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||| | || || |||||||| ||||| ||||||||||| || ||||||||| | Sbjct 22420 AATCCATAAAGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTACCATGATTCTTTCT 22479 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | || | ||||||||| || || ||||||||||||||| || | ||||| ||| Sbjct 22480 GATGTCAATGAAATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGCAAAGGCACC 22539 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 |||||| ||||||||||| || || | |||||| | |||||| ||| | | ||| Sbjct 22540 AGGTCTTTTGTTACCACCTTGATCAACATAACGTGCAGTGTTATTGAACACTCTTACCAT 22599 Query 26128 TGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 ||||| |||| ||| | ||| || || || | | ||| | | || || || | || Sbjct 22600 TGGAA-TAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCAGTAGAACGAA 22658 Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA--ATCTGA 26244 | | ||| ||| | ||| || || || || | ||||||||| ||||| || | | Sbjct 22659 TGTTGTGGATATGTAAACCAATCCCTCCTGCACTTTTTGAAATCAAAGCACACGATTTTA 22718 Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304 || ||||| | || |||| || |||| | ||||| | | || || || ||||| Sbjct 22719 AA--GTATCATATATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAGCATGAAGA 22776 Query 26305 TAATTG 26310 | ||| Sbjct 22777 CATTTG 22782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253037249138900