Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq38 185 1e-41 seq209 111 2e-19 seq243 105 8e-18 >seq38 Length=58422 Score = 185 bits (204), Expect = 1e-41 Identities = 847/1320 (64%), Gaps = 35/1320 (3%) Strand=Plus/Minus Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||||||||||||||||||||||| || ||||| |||||| | | || | ||||| Sbjct 22806 TTCAATGCTGGTACACCAAGACCCCAAATGTCTTCATGCTTCTTGCTTGCTATGAAGGAT 22747 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 || || || | ||||| |||| ||| | | |||||| || ||||| | || Sbjct 22746 GATTCTATTGAAGGTATATATGATACTTTAAAATCGTGTGCTTTGATTTCAAAAAGTGCA 22687 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || || ||||| | || ||||| | | | | | | || ||| || || Sbjct 22686 GGAGGGATTGGTTTACATATCCACAACATTCGTTCTACTGGTGCTTACATTGCTGGTACC 22627 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 |||||| || ||||||||||||||||| | | || || || ||| || || ||| Sbjct 22626 AATGGTACTTCTAATGGTATTATTCCAATGGTAAGAGTGTTCAATAACACTGCACGTTAT 22567 Query 75569 GTAAATCAAGCGGGGCGTCGCAAGG---GGT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 || |||||| | || | ||| ||| || | || | ||||| ||||||||||| Sbjct 22566 GTTGATCAAG-GTGGTAACAAAAGACCTGGTGCCTTTGCCTTGTACTTAGAACCATGGCA 22508 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || ||| | || ||| |||| | || || || ||| | ||||| || | | Sbjct 22507 CAGTGACATCTTTGATTTCATTGACATCAGAAAGAATCATGGTAAAGAAGAAA-TCAGAG 22449 Query 75685 T-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 |||||| | || || | | |||||||||||| | |||||||| | || || | Sbjct 22448 CCAGAGATTTGTTCCCAGCTTTATGGATTCCAGACTTGTTCATGAAAAGAGTCGAACAAA 22389 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 ||| | ||| || | |||| ||| | |||| |||||| | | || | |||| Sbjct 22388 ACGGTGATTGGACTTTGTTCTCACCAAATGAGGCCCCAGGTTTGGCTGATGTTTACGGTG 22329 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | || || |||| | || || | || ||| | || | | || ||| | | Sbjct 22328 ACGAATTCGAAGAATTATATACCAGATACGAAAAAGAAAACCGTGGCAGACAGACCAT-C 22270 Query 75864 CAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 || | | | || ||| | ||||| | | | || || || || || || |||| | Sbjct 22269 AAGGCCCAAAAATTGTGGTACGCTATCTTGGGAGCCCAAACAGAAACGGGTACTCCATTT 22210 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||| | ||||| ||| | |||||||| || ||||||||||| ||||| | || || Sbjct 22209 ATGTTGTACAAAGATTCATGTAACAACAAATCCAACCAAAAGAACTTGGGTATTATTAAA 22150 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 || || | || |||||| | || || | | | ||||| |||||||| Sbjct 22149 TCTTCCAACTTATGTTGTGAAATTGTTGAATATTCTGCTCCAGATGAAGTCGCTGTTTGT 22090 Query 76043 AATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTT----TTGA 76098 || ||||| || || || | ||| | ||| | ||| || || | | ||| Sbjct 22089 AACTTGGCCTCCATTGCTTTACCATCATTTGTTGA--AAGCGA-TCAAAGTAATACTTGG 22033 Query 76099 T-----TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 | | ||| || | ||||| |||| ||| | || ||| || | ||| |||| Sbjct 22032 TACAACTTTGATAAGTTACATGATGTCACCAAGGTAGTCACCCGTAACTTGAACAGAGTT 21973 Query 76154 ATTGACAGAAATTTTTATCCCGTTG-AGACTGCGCGAAAG-TCTAATATGCGACACAGAC 76211 |||||| | || ||| || ||| ||| || |||||| || |||||| ||||||||| Sbjct 21972 ATTGACCGCAACCATTACCCAGTTCCAGAA-GC-CGAAAGATCAAATATGAGACACAGAC 21915 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT---TTTGTGCCGCTACGCAT 76268 | |||| |||||||||||||||| | || |||| ||||| ||| | ||| ||| Sbjct 21914 CAATTGCTTTGGGTGTTCAAGGTTTGGCTGATGCCTTTATGGAATTGAG--ATTAC-CAT 21858 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 |||| || | ||||||| || | || || || || || || || || || || Sbjct 21857 TTGACTCCCAAGAAGCCAGAGAATTAAACATTCAAATTTTCGAGACTATTTACCATGCTG 21798 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 | | || || | |||||||||| ||| ||||| |||| || || | | || | Sbjct 21797 CTGTTGAAGCTTCTGTTGAATTGGCTAAAGAAGAAGGTGCCTACGAAACTTATCCAGGCT 21738 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACT 76448 | || || || ||||| | | ||||||||| | | |||| ||||||| || || | Sbjct 21737 CCCCTGCCTCTCAAGGTTTATTACAGTTTGATTTAT-GGAACAGAAAACCAA-CTGAATT 21680 Query 76449 A--CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 | || |||||| | || || | || | ||| | | ||| | || Sbjct 21679 ATGGGATTGGGATACATTAAAACAAAATTTGGCTAAGCATGGTATGAGAAACTCCTTATT 21620 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 | || |||||||| || || || || ||||||| |||||||| ||||| || || || Sbjct 21619 AGTTGCTCCAATGCCTACTGCTTCTACATCACAAATTTTGGGTAACAATGAGTGTTTCGA 21560 Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 ||||||||| | ||||| ||| |||||| | ||||| || ||| |||||||| Sbjct 21559 ACCATACACTTCTAACATTTACTCCAGAAGAGTGTTAGCAGGAGAATTTCAAATTGTCAA 21500 >seq209 Length=22522 Score = 111 bits (122), Expect = 2e-19 Identities = 110/141 (78%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 27892 TTCTTTACCT-CAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGT 27950 ||||||| | | || ||||| || | |||||| || | || ||||| |||||||| Sbjct 8904 TTCTTTAATTTCGAAATCTTTATCACTGTGATTAAATAAGACTACTTTCACTTCACCACG 8963 Query 27951 ATAGTCGGGATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGA 28010 ||| |||| ||||||||||| |||||| | |||||||||||||||||| | || || Sbjct 8964 ATAATCGGCGTCAATAACACCAGCACCAGTTGAAATACCATGCTTCACAGCCAATCCTGA 9023 Query 28011 TCGTGGTGCAACACGACCATA 28031 |||||||||||||| ||||| Sbjct 9024 ACGTGGTGCAACACGGCCATA 9044 >seq243 Length=19219 Score = 105 bits (116), Expect = 8e-18 Identities = 352/536 (66%), Gaps = 39/536 (7%) Strand=Plus/Minus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 ||||| || |||||| | |||||| |||||| | || |||||||| | | ||||| Sbjct 9645 TGGACCGCCGAAGAAATCGATTTGAGTAAAGATTTGGATGACTGGAATAACAAATTGAAT 9586 Query 64771 GAAAATGAAAAGAAATT-----CATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATG 64825 ||||||| ||||| ||| || |||| ||||||| || |||| || |||| Sbjct 9585 GAAAATG-AAAGATATTTTGTCTCTAGAGTA----TTGGCATTTTTCGCTGCTTCTGATG 9531 Query 64826 GAATTGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGC 64885 | |||||| ||| || | | | | || || || |||||| || | |||||| Sbjct 9530 GTATTGTTGGTGAAAACTTAATTGAAAACTTCTCGACTGAAGTTCAACTTCCCGAAGCCA 9471 Query 64886 GCTCATTCTACGCATATCAATGCCATAAT-GAAATGGTTCATGGCGAAACATATTCAAAA 64944 |||||||||| | || | ||| || |||| ||||| ||||| || || | Sbjct 9470 AATCATTCTACG-GTTTCCAAATCATGATGGAAAACATTCATTCAGAAACCTACTCTTTA 9412 Query 64945 TTGATTGACAAATACATTAAGGATGGATCTGAAAAGAAGC-----AGTTATTTGAAGCCA 64999 || ||||| | ||||| || ||| || ||||||| | |||||| | |||| Sbjct 9411 TTAATTGAAACTTACATAAAAGAT---CCT--CAAGAAGCCGATTACTTATTTAATGCCA 9357 Query 65000 T--CCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGA--- 65054 | |||| | | ||||||||| | ||||| || | ||||| || |||||| || | Sbjct 9356 TTGCCAA--TATTCCATGTATTCAAAAGAAAGCTGACTGGGCTATCAAATGGATTCAAGA 9299 Query 65055 -CACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCT 65113 | ||| || | | | || | | |||| ||||| || || ||||| | Sbjct 9298 TGATGAAGCCTTG----TATGGTGAAAGATTAGTTGCCTTTGCTGCAGTTGAAGGTATTT 9243 Query 65114 TCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGC 65172 |||| || ||||| ||| |||| | |||||||| ||| | ||| | |||||||| Sbjct 9242 TCTTTAGTGGTTCATT-TGCTTCTATCTTCTGGTTGAAAAAGAGAGGTTTAATGCCAGGG 9184 Query 65173 CTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | |||||||| || | |||| | ||||||| ||| | ||| || ||||| Sbjct 9183 TTGACTTTCTCAAACGAGTTGATTTGCAGAGATGAAGGTTTACACACTGACTTTGC 9128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562948248960