Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq57 109 7e-19 seq4 89.7 7e-13 >seq57 Length=48952 Score = 109 bits (120), Expect = 7e-19 Identities = 234/350 (67%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460 ||| | |||||| || || || || |||||| | ||| ||||| || | || || Sbjct 17563 GAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAAAAGGGAGTG 17504 Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520 ||| | ||| | | ||||| |||||||| |||||||| || || || ||| | | Sbjct 17503 AAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATTGACTCATCGT 17444 Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580 ||||| ||||| || ||| ||||||| || |||||||||||| || || ||||| Sbjct 17443 CGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCAGAATAT 17384 Query 172581 ATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTAAT 172640 | || |||||| | ||||| | || |||||| | || || ||| | |||||| Sbjct 17383 AAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATGTTATTAAA 17324 Query 172641 ACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTCAA 172700 | || ||| || || | |||||| || | || | ||||||| ||| | Sbjct 17323 AAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAATCCACCAGAT 17264 Query 172701 CTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGT 172750 ||| |||||||| | ||||| || ||| || ||||||||||| Sbjct 17263 TTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTATGT 17214 >seq4 Length=109863 Score = 89.7 bits (98), Expect = 7e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 194246 AAATAGGGGATAAATTTTGTTCGGGAATGGCTCAAAAAGGAACTTGTGGTATGATTTATT 194305 |||| |||||||| ||| ||| || | ||||||||| ||| |||| ||| ||| Sbjct 39635 AAATTGGGGATAAGTTTGCCTCGAGACACGGTCAAAAAGGTACTATTGGTGTGACATATA 39576 Query 194306 CACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAATCCAA 194365 ||| ||||||||||| |||||| | |||||| || |||||| | |||||||| || Sbjct 39575 GACATGAAGATATGCCTTTTACAGCCGAAGGTATTGTTCCAGATTTAATTATCAACCCTC 39516 Query 194366 ATTGTATTCCGTCCAGAATGAC 194387 || |||||| || | ||||| Sbjct 39515 ATGCTATTCCATCTCGTATGAC 39494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632482547740960