Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq65 114 1e-20 seq31 82.4 7e-11 >seq65 Length=44577 Score = 114 bits (126), Expect = 1e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||||| || || | || || |||| |||||||| ||||| | ||||| ||| | Sbjct 11574 ACGATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATTACTTTAGAAGTTGAATCT 11515 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || || || |||||||||||||| || || || || Sbjct 11514 TCTGACACTATTGACAATGTCAAGTCCAAAATTCAAGACAAAGAAGGTATTCCACCAGAC 11455 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 |||||| | || || ||||| || ||||| |||| || |||| | || || || Sbjct 11454 CAACAAAGATTAATTTTTGCTGGTAAACAATTGGAAGACGGTAGAACTTTATCTGACTAC 11395 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||||| ||||||||||| || | |||||||| ||| |||| Sbjct 11394 AACATCCAAAAGGAATCTACTTTGCACTTGGTCTTGAGATT 11354 >seq31 Length=62326 Score = 82.4 bits (90), Expect = 7e-11 Identities = 87/114 (76%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 139494 GAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT 139553 || |||||||| ||| | ||||||||||| | ||| ||||| | ||| ||| ||||| Sbjct 1326 GATATCAAAAATATCACCATGCCATGGTTCTATATATATGGCAAATGCTCCTGGACGTTT 1267 Query 139554 GCC---ACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCgg 139604 || |||||||||||| | || | ||| ||||||| | || |||||||| || Sbjct 1266 ACCCCCACCTTGATCGACATATCTTGCAGTATTATTGTAAACACGCAACATGGG 1213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892583641760