Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq65 114 1e-20
seq31 82.4 7e-11
>seq65
Length=44577
Score = 114 bits (126), Expect = 1e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|||||||| || || | || || |||| |||||||| ||||| | ||||| ||| |
Sbjct 11574 ACGATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATTACTTTAGAAGTTGAATCT 11515
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || || || |||||||||||||| || || || ||
Sbjct 11514 TCTGACACTATTGACAATGTCAAGTCCAAAATTCAAGACAAAGAAGGTATTCCACCAGAC 11455
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|||||| | || || ||||| || ||||| |||| || |||| | || || ||
Sbjct 11454 CAACAAAGATTAATTTTTGCTGGTAAACAATTGGAAGACGGTAGAACTTTATCTGACTAC 11395
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||| ||||||||||| || | |||||||| ||| ||||
Sbjct 11394 AACATCCAAAAGGAATCTACTTTGCACTTGGTCTTGAGATT 11354
>seq31
Length=62326
Score = 82.4 bits (90), Expect = 7e-11
Identities = 87/114 (76%), Gaps = 3/114 (3%)
Strand=Plus/Minus
Query 139494 GAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT 139553
|| |||||||| ||| | ||||||||||| | ||| ||||| | ||| ||| |||||
Sbjct 1326 GATATCAAAAATATCACCATGCCATGGTTCTATATATATGGCAAATGCTCCTGGACGTTT 1267
Query 139554 GCC---ACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCgg 139604
|| |||||||||||| | || | ||| ||||||| | || |||||||| ||
Sbjct 1266 ACCCCCACCTTGATCGACATATCTTGCAGTATTATTGTAAACACGCAACATGGG 1213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449892583641760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |