Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq57 105 8e-18 seq4 86.0 8e-12 >seq57 Length=48952 Score = 105 bits (116), Expect = 8e-18 Identities = 241/360 (67%), Gaps = 2/360 (1%) Strand=Plus/Minus Query 168519 ATTCTTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGAT 168578 ||| || | ||| | |||||| || | || || |||||| | ||| ||||| || Sbjct 17572 ATTATTCATGAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAA 17513 Query 168579 ATAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTT 168638 | || || ||| | ||| | | ||||| |||||||| |||||||| || || || Sbjct 17512 AAGGGAGTGAAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATTG 17453 Query 168639 ACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGA 168698 || | | ||||| ||||| || ||| ||||||| || |||||||||||| || Sbjct 17452 ACTCATCGTCGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGT 17393 Query 168699 GCTCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAA 168758 || |||||| || |||||| | ||||| | || |||||| | || || ||| | Sbjct 17392 GCAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGAT 17333 Query 168759 ACTATAAATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGAT 168818 ||| || | || | | ||||| | |||||||||| | || | |||| || Sbjct 17332 GTTATTAAAAAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAAT 17273 Query 168819 GTACCACAACTTGATAAAATGGTTCTTCCCCCTTGTCA-CACTTTAGTGCAATTTTATGT 168877 |||| | ||| |||||||| | || || ||||| ||| || ||||||||||| Sbjct 17272 CCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGT-CAATTTTATGT 17214 >seq4 Length=109863 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 193450 AAATAGGGGATAAATTTTGTTCAGGAATGGCCCAAAAAGGAACTTGTGGTATGATTTATT 193509 |||| |||||||| ||| || || | |||||||| ||| |||| ||| ||| Sbjct 39635 AAATTGGGGATAAGTTTGCCTCGAGACACGGTCAAAAAGGTACTATTGGTGTGACATATA 39576 Query 193510 CACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAATCCAA 193569 ||| ||||||||||| |||||||| |||||| || |||||| | ||||| || || Sbjct 39575 GACATGAAGATATGCCTTTTACAGCCGAAGGTATTGTTCCAGATTTAATTATCAACCCTC 39516 Query 193570 ATTGTATTCCATCCAGAATGAC 193591 || ||||||||| | ||||| Sbjct 39515 ATGCTATTCCATCTCGTATGAC 39494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635170517769760