Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq57 105 8e-18
seq4 86.0 8e-12
>seq57
Length=48952
Score = 105 bits (116), Expect = 8e-18
Identities = 241/360 (67%), Gaps = 2/360 (1%)
Strand=Plus/Minus
Query 168519 ATTCTTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGAT 168578
||| || | ||| | |||||| || | || || |||||| | ||| ||||| ||
Sbjct 17572 ATTATTCATGAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAA 17513
Query 168579 ATAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTT 168638
| || || ||| | ||| | | ||||| |||||||| |||||||| || || ||
Sbjct 17512 AAGGGAGTGAAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATTG 17453
Query 168639 ACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGA 168698
|| | | ||||| ||||| || ||| ||||||| || |||||||||||| ||
Sbjct 17452 ACTCATCGTCGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGT 17393
Query 168699 GCTCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAA 168758
|| |||||| || |||||| | ||||| | || |||||| | || || ||| |
Sbjct 17392 GCAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGAT 17333
Query 168759 ACTATAAATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGAT 168818
||| || | || | | ||||| | |||||||||| | || | |||| ||
Sbjct 17332 GTTATTAAAAAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAAT 17273
Query 168819 GTACCACAACTTGATAAAATGGTTCTTCCCCCTTGTCA-CACTTTAGTGCAATTTTATGT 168877
|||| | ||| |||||||| | || || ||||| ||| || |||||||||||
Sbjct 17272 CCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGT-CAATTTTATGT 17214
>seq4
Length=109863
Score = 86.0 bits (94), Expect = 8e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 193450 AAATAGGGGATAAATTTTGTTCAGGAATGGCCCAAAAAGGAACTTGTGGTATGATTTATT 193509
|||| |||||||| ||| || || | |||||||| ||| |||| ||| |||
Sbjct 39635 AAATTGGGGATAAGTTTGCCTCGAGACACGGTCAAAAAGGTACTATTGGTGTGACATATA 39576
Query 193510 CACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAATCCAA 193569
||| ||||||||||| |||||||| |||||| || |||||| | ||||| || ||
Sbjct 39575 GACATGAAGATATGCCTTTTACAGCCGAAGGTATTGTTCCAGATTTAATTATCAACCCTC 39516
Query 193570 ATTGTATTCCATCCAGAATGAC 193591
|| ||||||||| | |||||
Sbjct 39515 ATGCTATTCCATCTCGTATGAC 39494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635170517769760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |