Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq57 98.7 1e-15 >seq57 Length=48952 Score = 98.7 bits (108), Expect = 1e-15 Identities = 242/363 (67%), Gaps = 8/363 (2%) Strand=Plus/Minus Query 180419 ATTCTTAAAGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGAT 180478 ||| || | |||||||||||| | | || | || || |||| | |||| || Sbjct 17572 ATTATTCATGAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAA 17513 Query 180479 ATTGGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATT- 180537 | || || ||| | ||| | | ||||| || ||| |||||||||| | ||||| Sbjct 17512 AAGGGAGTGAAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATTG 17453 Query 180538 --TCATTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCA 180595 |||| ||| ||||| ||||| |||||| ||||||| || |||||||||||| Sbjct 17452 ACTCATCGTCGT---GAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTT 17396 Query 180596 GGAGCTCAATATATTGACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGC 180655 || || |||||| || |||||| | | |||| || ||||| | || || ||| Sbjct 17395 GGTGCAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAA 17336 Query 180656 CAAGTTATAGAAACTATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGG 180715 | ||||| ||| | |||| ||||| | ||||||| ||||| | |||| Sbjct 17335 GATGTTATTAAAAAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGG 17276 Query 180716 AATGTATCACAATTACCAGATATGGCTCTTCCACCATGTCAC-TGTTTGGTACAATTTTA 180774 ||| | || | || | | ||||| | || |||||||| | ||| || |||||||| Sbjct 17275 AATCCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGT-CAATTTTA 17217 Query 180775 TGT 180777 ||| Sbjct 17216 TGT 17214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655272693628000