Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq57 98.7 1e-15
>seq57
Length=48952
Score = 98.7 bits (108), Expect = 1e-15
Identities = 242/363 (67%), Gaps = 8/363 (2%)
Strand=Plus/Minus
Query 180419 ATTCTTAAAGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGAT 180478
||| || | |||||||||||| | | || | || || |||| | |||| ||
Sbjct 17572 ATTATTCATGAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAA 17513
Query 180479 ATTGGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATT- 180537
| || || ||| | ||| | | ||||| || ||| |||||||||| | |||||
Sbjct 17512 AAGGGAGTGAAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATTG 17453
Query 180538 --TCATTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCA 180595
|||| ||| ||||| ||||| |||||| ||||||| || ||||||||||||
Sbjct 17452 ACTCATCGTCGT---GAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTT 17396
Query 180596 GGAGCTCAATATATTGACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGC 180655
|| || |||||| || |||||| | | |||| || ||||| | || || |||
Sbjct 17395 GGTGCAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAA 17336
Query 180656 CAAGTTATAGAAACTATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGG 180715
| ||||| ||| | |||| ||||| | ||||||| ||||| | ||||
Sbjct 17335 GATGTTATTAAAAAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGG 17276
Query 180716 AATGTATCACAATTACCAGATATGGCTCTTCCACCATGTCAC-TGTTTGGTACAATTTTA 180774
||| | || | || | | ||||| | || |||||||| | ||| || ||||||||
Sbjct 17275 AATCCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGT-CAATTTTA 17217
Query 180775 TGT 180777
|||
Sbjct 17216 TGT 17214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655272693628000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |