Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2 165 6e-36 seq103 159 3e-34 >seq2 Length=135431 Score = 165 bits (182), Expect = 6e-36 Identities = 565/863 (65%), Gaps = 37/863 (4%) Strand=Plus/Minus Query 43711 TCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGAC 43770 ||| ||| | |||| || |||||||| | |||||||| | ||| || |||||||| Sbjct 60227 TCCTATTAAGTATCCGGAGTTATGGCAATTCTACAAAAAGTCGTTGGCCTCGTTTTGGAC 60168 Query 43771 AGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCA-CAAG 43829 ||| ||||| |||| || | |||||| || || | |||| || ||||| | | | Sbjct 60167 AGCTGAAGAGCTTGACTTAAGTAAAGATTTGGCCGACTGGAA--CAATAAAATGAACGAA 60110 Query 43830 AA--AAACATTTTATATCTTTGG--TTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTC 43885 || ||| ||||| |||| | | ||||| || |||||||| || || || ||| Sbjct 60109 AATGAAAGATTTTTCATCTCCCGAGTGTTGGCATTCTTTGCTGCCTCGGATGGTATTGTC 60050 Query 43886 AATGAAAATTTGGTTAGTCGGTT-TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944 ||||| || ||||| || || || ||||| ||| ||||||| || | | | Sbjct 60049 AATGAGAACTTGGTGGAAAATTTCTGTGCT-GAAGTACAAATACCAGAGGCTCAACTGGT 59991 Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004 || |||||| || || ||||| || ||||| || | || | | || || Sbjct 59990 ATACAAGTTTCAGATCATGATGGAAAACATCCATTCAGAGACTTATTCGTTGTTAATCGA 59931 Query 44005 TACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGATAGAAACAGTA 44062 || ||| |||| || || |||||| | ||||||||||| || |||| | Sbjct 59930 AACATACTTCAAGGACC--CAGAAGAAGCGGACTTTTTGTTTAATGCTATTGAAAATATC 59873 Query 44063 CCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA----ATGATTC 44118 || || | | | ||||| || |||||| | | ||||| |||| | ||| | Sbjct 59872 CCATTCATCAGAGAAAAAGCCGATTGGGCCATCAGGTGGAT----TCAAGACGAGGATGC 59817 Query 44119 TTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAG--GA 44173 ||| || || || | || |||||||| | || ||||| || || |||||| | Sbjct 59816 TTTGTATGCTGAGAGATTGGTTGCGTTTGCTGCCGTTGAAGGTATATT--TTTCAGTGGT 59759 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 |||||||| || || || |||||||||||| | || |||||||| || ||||| ||||| Sbjct 59758 TCGTTTGCAGCAATTTTCTGGTTAAAGAAAAGGGGGTTGATGCCAGGATTGACATTTTCG 59699 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 ||||| || || | || || ||||| | || |||| ||| || |||||| | Sbjct 59698 AATGAATTGATTTGCCGAGACGAAGGGATTCACACGGATTATGCCTGTTTGTTATTCTCG 59639 Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353 ||| || ||| |||| ||||| | | ||| | || || ||||| || Sbjct 59638 TATTTA-AAGA--ATAAACCTTCTCCAGAAATCATTGAGAAAATCATTACCGAGGCTGTG 59582 Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAA 44413 | || || || ||| | | | || | || ||| |||| | ||||||||| Sbjct 59581 ACTATTGAGAAAAAATATTTCAGCGATGCGCTTCCAGTATCTTTATTGGGAATGAATTGT 59522 Query 44414 CTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGC 44473 |||||| ||| ||| |||||| |||| ||||| ||| | ||| || | | Sbjct 59521 GACTTGATGTGCCAGTATGTTGAATTTGTTGCTGATCGATTATTAGTGG-CCT--TTGGA 59465 Query 44474 GATAAACACTAT---ATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAA 44530 ||||| | ||| | ||| || || |||||||| ||||||||||| || |||| Sbjct 59464 AATAAAAAGTATTACAATGTTACTAATCCATTTGATTTCATGGAAAATATCTCCTTGGCT 59405 Query 44531 GGCAAAACAAACTTTTTTGAAAA 44553 || ||||| || || |||||||| Sbjct 59404 GGTAAAACTAATTTCTTTGAAAA 59382 >seq103 Length=35786 Score = 159 bits (176), Expect = 3e-34 Identities = 254/363 (70%), Gaps = 15/363 (4%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || |||||||| |||||||| ||||| || | ||||||||| ||| ||| ||||||||| Sbjct 33438 CCAAAAATTGTCAATGGTCCAGAAATGTTGAGTAAATATGTTGGTGCATCTGAAGAAAAT 33379 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC- 19547 | || ||| ||| || ||||||| |||| | ||| | | || | | | ||| Sbjct 33378 ATTCGTAATTTATTTAAAGATGCTGAAGCAGAATATAAAT-TAAAAGGTGAAGA--TTCA 33322 Query 19548 --TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG- 19604 ||| || |||| ||| | ||||||||||| | | | || |||||||| || || Sbjct 33321 GATTTACATGTTATTATATTTGATGAATTGGATTCTGTTTTCAAACAAAGAGGATCAGGG 33262 Query 19605 --------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGAC 19656 || | ||| || ||| | ||||||||||||| | | || ||| | || Sbjct 33261 AAATCAGATGGCACTGGTGTTGGTGATAATGTTGTCAATCAATTATTATCGAAAATGGAT 33202 Query 19657 GGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATA 19716 || ||| ||||| ||||||||||||| |||||||| ||||| ||| | | || || || Sbjct 33201 GGGGTTGACCAATTGAATAATATTTTGGTTATTGGTATGACAAATCGTTTAGATTTGATT 33142 Query 19717 GACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGAT 19776 || | || |||||| |||| ||| | || ||||| | || ||||| ||||| ||| Sbjct 33141 GATACTGCTTTATTAAGACCAGGTAGATTTGAAATTCAAATTGAAATATCTTTACCTGAT 33082 Query 19777 GAA 19779 ||| Sbjct 33081 GAA 33079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397451679156460