Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2 165 6e-36
seq103 159 3e-34
>seq2
Length=135431
Score = 165 bits (182), Expect = 6e-36
Identities = 565/863 (65%), Gaps = 37/863 (4%)
Strand=Plus/Minus
Query 43711 TCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGAC 43770
||| ||| | |||| || |||||||| | |||||||| | ||| || ||||||||
Sbjct 60227 TCCTATTAAGTATCCGGAGTTATGGCAATTCTACAAAAAGTCGTTGGCCTCGTTTTGGAC 60168
Query 43771 AGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCA-CAAG 43829
||| ||||| |||| || | |||||| || || | |||| || ||||| | | |
Sbjct 60167 AGCTGAAGAGCTTGACTTAAGTAAAGATTTGGCCGACTGGAA--CAATAAAATGAACGAA 60110
Query 43830 AA--AAACATTTTATATCTTTGG--TTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTC 43885
|| ||| ||||| |||| | | ||||| || |||||||| || || || |||
Sbjct 60109 AATGAAAGATTTTTCATCTCCCGAGTGTTGGCATTCTTTGCTGCCTCGGATGGTATTGTC 60050
Query 43886 AATGAAAATTTGGTTAGTCGGTT-TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944
||||| || ||||| || || || ||||| ||| ||||||| || | | |
Sbjct 60049 AATGAGAACTTGGTGGAAAATTTCTGTGCT-GAAGTACAAATACCAGAGGCTCAACTGGT 59991
Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004
|| |||||| || || ||||| || ||||| || | || | | || ||
Sbjct 59990 ATACAAGTTTCAGATCATGATGGAAAACATCCATTCAGAGACTTATTCGTTGTTAATCGA 59931
Query 44005 TACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGATAGAAACAGTA 44062
|| ||| |||| || || |||||| | ||||||||||| || |||| |
Sbjct 59930 AACATACTTCAAGGACC--CAGAAGAAGCGGACTTTTTGTTTAATGCTATTGAAAATATC 59873
Query 44063 CCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA----ATGATTC 44118
|| || | | | ||||| || |||||| | | ||||| |||| | ||| |
Sbjct 59872 CCATTCATCAGAGAAAAAGCCGATTGGGCCATCAGGTGGAT----TCAAGACGAGGATGC 59817
Query 44119 TTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAG--GA 44173
||| || || || | || |||||||| | || ||||| || || |||||| |
Sbjct 59816 TTTGTATGCTGAGAGATTGGTTGCGTTTGCTGCCGTTGAAGGTATATT--TTTCAGTGGT 59759
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|||||||| || || || |||||||||||| | || |||||||| || ||||| |||||
Sbjct 59758 TCGTTTGCAGCAATTTTCTGGTTAAAGAAAAGGGGGTTGATGCCAGGATTGACATTTTCG 59699
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
||||| || || | || || ||||| | || |||| ||| || |||||| |
Sbjct 59698 AATGAATTGATTTGCCGAGACGAAGGGATTCACACGGATTATGCCTGTTTGTTATTCTCG 59639
Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353
||| || ||| |||| ||||| | | ||| | || || ||||| ||
Sbjct 59638 TATTTA-AAGA--ATAAACCTTCTCCAGAAATCATTGAGAAAATCATTACCGAGGCTGTG 59582
Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAA 44413
| || || || ||| | | | || | || ||| |||| | |||||||||
Sbjct 59581 ACTATTGAGAAAAAATATTTCAGCGATGCGCTTCCAGTATCTTTATTGGGAATGAATTGT 59522
Query 44414 CTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGC 44473
|||||| ||| ||| |||||| |||| ||||| ||| | ||| || | |
Sbjct 59521 GACTTGATGTGCCAGTATGTTGAATTTGTTGCTGATCGATTATTAGTGG-CCT--TTGGA 59465
Query 44474 GATAAACACTAT---ATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAA 44530
||||| | ||| | ||| || || |||||||| ||||||||||| || ||||
Sbjct 59464 AATAAAAAGTATTACAATGTTACTAATCCATTTGATTTCATGGAAAATATCTCCTTGGCT 59405
Query 44531 GGCAAAACAAACTTTTTTGAAAA 44553
|| ||||| || || ||||||||
Sbjct 59404 GGTAAAACTAATTTCTTTGAAAA 59382
>seq103
Length=35786
Score = 159 bits (176), Expect = 3e-34
Identities = 254/363 (70%), Gaps = 15/363 (4%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|| |||||||| |||||||| ||||| || | ||||||||| ||| ||| |||||||||
Sbjct 33438 CCAAAAATTGTCAATGGTCCAGAAATGTTGAGTAAATATGTTGGTGCATCTGAAGAAAAT 33379
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC- 19547
| || ||| ||| || ||||||| |||| | ||| | | || | | | |||
Sbjct 33378 ATTCGTAATTTATTTAAAGATGCTGAAGCAGAATATAAAT-TAAAAGGTGAAGA--TTCA 33322
Query 19548 --TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG- 19604
||| || |||| ||| | ||||||||||| | | | || |||||||| || ||
Sbjct 33321 GATTTACATGTTATTATATTTGATGAATTGGATTCTGTTTTCAAACAAAGAGGATCAGGG 33262
Query 19605 --------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGAC 19656
|| | ||| || ||| | ||||||||||||| | | || ||| | ||
Sbjct 33261 AAATCAGATGGCACTGGTGTTGGTGATAATGTTGTCAATCAATTATTATCGAAAATGGAT 33202
Query 19657 GGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATA 19716
|| ||| ||||| ||||||||||||| |||||||| ||||| ||| | | || || ||
Sbjct 33201 GGGGTTGACCAATTGAATAATATTTTGGTTATTGGTATGACAAATCGTTTAGATTTGATT 33142
Query 19717 GACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGAT 19776
|| | || |||||| |||| ||| | || ||||| | || ||||| ||||| |||
Sbjct 33141 GATACTGCTTTATTAAGACCAGGTAGATTTGAAATTCAAATTGAAATATCTTTACCTGAT 33082
Query 19777 GAA 19779
|||
Sbjct 33081 GAA 33079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397451679156460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |