Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq38 199 5e-46
seq243 114 2e-20
seq209 111 2e-19
seq90 89.7 6e-13
>seq38
Length=58422
Score = 199 bits (220), Expect = 5e-46
Identities = 853/1324 (64%), Gaps = 43/1324 (3%)
Strand=Plus/Plus
Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728
|||||||| ||| || ||||| | |||||| ||| ||||| | |||||||||
Sbjct 21500 TTGACAATTTGAAATTCTCCTGCTAACACTCTTCTGGAGTAAATGTTAGAAGTGTATGGT 21559
Query 110729 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 110788
|| || || ||||| |||||||| ||||||| || || || || |||||||| || |
Sbjct 21560 TCGAAACACTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCAACT 21619
Query 110789 AAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG--T 110846
|| | ||| | | ||| | || | || || | |||||| || |
Sbjct 21620 AATAAGGAGTTTCTCATACCATGCTTAGCCAAATTTTGTTTTAATGTATCCCAATCCCAT 21679
Query 110847 AGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAG 110906
| || || ||||||| |||| | | |||||||| | | ||||| || || || |
Sbjct 21680 AATTCAG-TTGGTTTTCTGTTCC-ATAAATCAAACTGTAATAAACCTTGAGAGGCAGGGG 21737
Query 110907 AACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCA-CAGCTCGCCTCCAGG 110965
| || | | ||||| |||| ||||| ||| |||||||||| ||| || || |
Sbjct 21738 AGCCTGGATAAGTTTCGTAGGCACCTTCTTCTTTAGCCAATTCAACAGAA-GCTTCAACA 21796
Query 110966 GATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCA 111025
| || || || || || || || || || || | || ||||||| | || |||
Sbjct 21797 GCAGCATGGTAAATAGTCTCGAAAATTTGAATGTTTAATTCTCTGGCTTCTTGGGAGTCA 21856
Query 111026 AATGCGTAGCGGCACAAA---ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 111082
|||| ||| | ||| ||||| |||| || | |||||||||||||||| ||||
Sbjct 21857 AATG-GTAAT--CTCAATTCCATAAAGGCATCAGCCAAACCTTGAACACCCAAAGCAATT 21913
Query 111083 GGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTGTCAA 111140
|||||||||| |||||| || |||||| || ||| ||| || ||| || | |||||
Sbjct 21914 GGTCTGTGTCTCATATTTGATCTTTCG-GC-TTCTGGAACTGGGTAATGGTTGCGGTCAA 21971
Query 111141 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA----- 111195
| |||| ||| | || ||| || | ||| |||| ||||| | || ||| |
Sbjct 21972 TAACTCTGTTCAAGTTACGGGTGACTACCTTGGTGACATCATGTAACTTATCAAAGTTGT 22031
Query 111196 ATCAA----AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 111251
| ||| | | || || ||| | ||| | ||| | || || || ||||| |
Sbjct 22032 ACCAAGTATTACTTTGA-TCGCTT--TCAACAAATGATGGTAAAGCAATGGAGGCCAAGT 22088
Query 111252 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAAC 111311
| |||||||| ||||| | | | || || | |||||| |||||||||||||
Sbjct 22089 TACAAACAGCGACTTCATCTGGAGCAGAATATTCAACAATTTCACAACATAAGTTGGAAG 22148
Query 111312 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCA 111371
||||| | ||||| ||||||||||| || ||||| || | ||| ||||| | ||
Sbjct 22149 ATTTAATAATACCCAAGTTCTTTTGGTTGGATTTGTTGTTACATGAATCTTTGTACAACA 22208
Query 111372 TGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCT 111430
| | || || ||||| || || || | | | ||||| | ||| || | | | ||
Sbjct 22209 TAAATGGAGTACCCGTTTCTGTTTGGGCTCCCAAGATAGCGTACCACAATTTTTGGGCCT 22268
Query 111431 GGTACAATGGCGT---TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487
| |||| | || | || || ||||| | || || | |||| ||
Sbjct 22269 TG----ATGGTCTGTCTGCCACGGTTTTCTTTTTCGTATCTGGTATATAATTCTTCGAAT 22324
Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 111547
|| ||||| | || | | |||||| |||| | ||| |||| | || ||| | |
Sbjct 22325 TCGTCACCGTAAACATCAGCCAAACCTGGGGCCTCATTTGGTGAGAACAAAGTCCAATCA 22384
Query 111548 CCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607
|| || || || | |||||||| | |||||||||||| | | || || | ||||
Sbjct 22385 CCGTTTTGTTCGACTCTTTTCATGAACAAGTCTGGAATCCATAAAGCTGGGAACAAATCT 22444
Query 111608 CT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 111666
|| | | || ||||| | ||| || || || | |||| ||| || | ||| ||
Sbjct 22445 CTGGCTCTGA-TTTCTTCTTTACCATGATTCTTTCTGATGTCAATGAAATCAAAGATGTC 22503
Query 111667 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGAT 111722
||||||||| || | || | || | | || |||| | ||| ||||||
Sbjct 22504 ACTGTGCCATGGTTCTAAGTACAAGGCAAAGGCACCAGGTCTTTTG-TTACCACCTTGAT 22562
Query 111723 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 111782
||||| || || ||| || || || | | ||||||||||||||||| || ||
Sbjct 22563 CAACATAACGTGCAGTGTTATTGAACACTCTTACCATTGGAATAATACCATTAGAAGTAC 22622
Query 111783 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 111842
|||| || || ||| || | | | | | | ||||| || | ||||| |
Sbjct 22623 CATTGGTACCAGCAATGTAAGCACCAGTAGAACGAATGTTGTGGATATGTAAACCAATCC 22682
Query 111843 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 111902
| || || | ||||| || |||||| | | ||| |||| ||||| | || |
Sbjct 22683 CTCCTGCACTTTTTGAAATCAAAGCACACGATTTTAAAGTATCATATATACCTTCAATAG 22742
Query 111903 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 111962
| || ||||| | || | | |||||| ||||| || |||||||||||||||||||
Sbjct 22743 AATCATCCTTCATAGCAAGCAAGAAGCATGAAGACATTTGGGGTCTTGGTGTACCAGCAT 22802
Query 111963 TGAA 111966
||||
Sbjct 22803 TGAA 22806
>seq243
Length=19219
Score = 114 bits (126), Expect = 2e-20
Identities = 355/536 (66%), Gaps = 39/536 (7%)
Strand=Plus/Plus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| | ||| ||||||| | |||| | || |||||||| | |||
Sbjct 9128 GCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAAGTCAACCCT 9187
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777
||||| | ||| | ||| |||||||| | |||| ||| ||||| || ||||| ||
Sbjct 9188 GGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCA-AATGAACCACTAAAGAAAAT 9246
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATC-- 122834
||| || || ||||| |||| | | ||| | | | || ||| ||||
Sbjct 9247 ACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATA----CAAGGCTTCATCATCTT 9302
Query 122835 -AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGG--ATGGC 122891
|| |||||| || ||||| | || ||||| | ||||||||| | | |||| |||||
Sbjct 9303 GAATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATA--TTGGCAATGGC 9360
Query 122892 TTCAAATAACT-----GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTT 122946
| |||||| | ||||||| || ||| || ||||| | ||||| |||
Sbjct 9361 ATTAAATAAGTAATCGGCTTCTTG--AGG---ATCTTTTATGTAAGTTTCAATTAATAAA 9415
Query 122947 GAATATGTTTCGCCATGAACCATTTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGC 123005
|| || ||||| ||||| |||| || ||| | || | |||||||||| ||
Sbjct 9416 GAGTAGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAAC-CGTAGAATGATTTGGC 9474
Query 123006 TTCGCTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATC 123065
|||| | ||||| ||| || || || | | | | || ||| |||||| |||||
Sbjct 9475 TTCGGGAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATC 9534
Query 123066 GGACCCAGCAAAGAATGCCAGGATGTACTTTATG-----AATTTCTTTTCATTTTCATTC 123120
|| |||| || ||||||| |||| || ||| ||||| |||||||||||
Sbjct 9535 AGAAGCAGCGAAAAATGCCAA----TACTCTAGAGACAAAATATCTTT-CATTTTCATTC 9589
Query 123121 A---GGGTCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
| | | |||||||| || | |||||| |||||| | |||||| || |||||
Sbjct 9590 AATTTGTTATTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCA 9645
>seq209
Length=22522
Score = 111 bits (122), Expect = 2e-19
Identities = 110/141 (78%), Gaps = 1/141 (1%)
Strand=Plus/Minus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
||||| |||||||||||||| || || | |||||||||||||||||| | ||||||
Sbjct 9044 TATGGCCGTGTTGCACCACGTTCAGGATTGGCTGTGAAGCATGGTATTTCAACTGGTGCT 8985
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
||||||||||| |||| ||| |||||||| ||||| || | || |||||| | ||
Sbjct 8984 GGTGTTATTGACGCCGATTATCGTGGTGAAGTGAAAGTAGTCTTATTTAATCACAGTGAT 8925
Query 164724 AAAGACTTTG-AGGTAAAGAA 164743
||||| || | | |||||||
Sbjct 8924 AAAGATTTCGAAATTAAAGAA 8904
>seq90
Length=39169
Score = 89.7 bits (98), Expect = 6e-13
Identities = 217/325 (67%), Gaps = 9/325 (3%)
Strand=Plus/Minus
Query 11535 TGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTG 11594
||||||| |||||||| || | |||||||| | |||| ||| | |||||||| |
Sbjct 37923 TGTCAAACCCATCCATTTCTACCAACAATTGATTCAATGTTGTTTCACGTTCATCATTGG 37864
Query 11595 C-----TGGCATACCACCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAA 11649
| |||||| || | | | ||||| || || | ||||| || ||||||| ||
Sbjct 37863 CACCAGTGGCATTCCCCTTGGAA--CGTTGTTTACCAATAGCATCGATTTCATCAACAAA 37806
Query 11650 GACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACC 11709
||||| | || |||||| || || | | ||| | ||| ||||| || || ||
Sbjct 37805 CACAATCGAAGGGGCATTTTCACGTGCAGTCTTAAATAAATCACGAACTCTAGATGCTCC 37746
Query 11710 CACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTG 11768
|||||||||||||| || ||||| | || |||| || | | |||||| || ||
Sbjct 37745 AACACCAACAAACATTTCTACAAATTCTGACCCAGA-AACAGAGTAGAATGGAACTCCTG 37687
Query 11769 ATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAA 11828
|||||| || | || ||| || | || || || || ||||| ||| | | ||
Sbjct 37686 CTTCACCAGCAGTTGCCTTGGCAAGTAAAGTTTTACCTGTCCCTGGAGGACCAGATAAAA 37627
Query 11829 GGGCGCCTCGGGGGATCTTGGCACC 11853
|| || || ||||| || |||||
Sbjct 37626 TAGCCCCACGAGGGATTTTTGCACC 37602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628024997443200
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