Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq38 116 5e-21 seq31 114 2e-20 seq90 82.4 9e-11 >seq38 Length=58422 Score = 116 bits (128), Expect = 5e-21 Identities = 882/1402 (63%), Gaps = 55/1402 (4%) Strand=Plus/Plus Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 |||||||| || || ||||||||||||||||| ||||| | ||| || || || ||||| Sbjct 21551 GTGTATGGTTCGAAACACTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATT 21610 Query 118254 GGTGCCA-TGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTTCCTTGAGAGCG 118310 || || | | | |||| ||| | | ||| | || || ||| || || | | Sbjct 21611 GGAGCAACTAATAAGGA-GTTTCTCATACCATGCTTAGCCAAATT--TTGTTTTAATGTA 21667 Query 118311 TCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 118368 ||||| || || || || ||| | | | ||| | ||||||||| | | ||||| Sbjct 21668 TCCCAATCCCATAATTCAG--TTGGTTTTCTGTTCCATAAATCAAACTGTAATAAACCTT 21725 Query 118369 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC----G 118424 | || || || || || | | || || || | || || | | |||||||| | Sbjct 21726 GAGAGGCAGGGGAGCCTGGATAAGTTTCGTAGGCACCTTCTTCTTTAGCCAATTCAACAG 21785 Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484 |||| || | || || || || || || || ||||| || || | | | || Sbjct 21786 AAGCT----TCAACAGCAGCATGGTAAATAGTCTCGAAAATTTGAATGTTTAATTCTCTG 21841 Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 118544 || || | ||| ||||| | | || | ||||| |||| || | |||||| ||| Sbjct 21842 GCTTCTTGGGAGTCAAATGGTAATCTCAATTCCATAAAGGCATCAGCCAAACCTTGAACA 21901 Query 118545 CCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCTCCA-CGGGATAAA 118602 || | ||||||| | ||||||||||| || ||| || || ||| | | || ||| Sbjct 21902 CCCAAAGCAATTGGTCTGTGTCTCATATTTGATCTTTCG-GCT-TCTGGAACTGGGTAAT 21959 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 || | || ||||| || || | || |||||| ||||| |||| ||||| | || Sbjct 21960 GGTTGCGGTCAATAACTCTGTTCAAGTTACGGGTGACTACCTTGGTGACATCATGTAACT 22019 Query 118663 TTTCGTAATCAAAACTG---CGAGTCTCTTCATTGA---CAT---ACTTAGGAAGG---- 118709 | |||||| || | ||| | | | |||| | | || | || || Sbjct 22020 T------ATCAAAGTTGTACCAAGTAT-TACTTTGATCGCTTTCAACAAATGATGGTAAA 22072 Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769 || || || |||| ||||| |||| | ||||| | ||| || || | |||||| Sbjct 22073 GCAATGGAGGCCAAGTTACAAACAGCGACTTCATCTGGAGCAGAATATTCAACAATTTCA 22132 Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 || ||||| ||| ||||| | |||||||||||||| || || || ||||||| Sbjct 22133 CAACATAAGTTGGAAGATTTAATAATACCCAAGTTCTTTTGGTTGGATTTGTTGTTACAT 22192 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 | ||| ||||| | ||| |||| || ||||| || ||||||| | ||||| | | Sbjct 22193 GAATCTTTGTACAACATAAATGGAGTACCCGTTTCTGTTTGGGCTCCCAAGATAGCGTAC 22252 Query 118890 CAGA---CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTG 118946 || | | ||| || | | || || | || |||| ||||| | || Sbjct 22253 CACAATTTTTGGGC--CTTG-ATGGTCTGTCTGCCACGGTTTTCTTTTTCGTATCTGGTA 22309 Query 118947 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 119006 || | |||| || || ||||| | || | | ||||| |||| || ||| || Sbjct 22310 TATAATTCTTCGAATTCGTCACCGTAAACATCAGCCAAACCTGGGGCCTCATTTGGTGAG 22369 Query 119007 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066 || | || ||| | ||| | || || | |||||||| | |||||| ||||| | Sbjct 22370 AACAAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAACAAGTCTGGAATCCATAAA 22429 Query 119067 GCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 119125 || | ||| | ||| | | | || |||||| | || ||||| | | || | Sbjct 22430 GCTGGGAACAAATCTCTGGCTCTGA-TTTCTTCTTTACCATGATTCTTTCTGATGTCAAT 22488 Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTAC 119181 || || | ||| || |||||| ||||| | ||||| || | | ||| ||| Sbjct 22489 GAAATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGCAAAGGCACCAGGTCTTTT 22548 Query 119182 GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241 | |||| | || | ||||| | |||||| || || || | | ||||||||| | Sbjct 22549 G-TTACCACCTTGATCAACATAACGTGCAGTGTTATTGAACACTCTTACCATTGGAATAA 22607 Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGA 119301 |||||| || ||||| || || ||| || | | | | | | ||||| Sbjct 22608 TACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCAGTAGAACGAATGTTGTGGA 22667 Query 119302 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 119361 | || | |||||| || ||||| | ||||| || || ||| | | | | | | Sbjct 22668 TATGTAAACCAATCCCTCCTGCACTTTTTGAAATCAAAGCACACGATTTTAAAGTATCAT 22727 Query 119362 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCC 119421 | || || || || || ||| |||| | || | | |||||| |||||||| || | Sbjct 22728 ATATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAGCATGAAGACATTTGGGGTC 22787 Query 119422 TGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCT 119481 | ||||||||||| ||||| | || | | ||| | || | | ||| |||||| Sbjct 22788 TTGGTGTACCAGCATTGAACAAGCAAGGAGAACCATGGGTAAAGAATCTTTGAGACATCA 22847 Query 119482 TGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 119541 || ||||| || | ||| || || || | ||||| ||||| | | ||| | || Sbjct 22848 AGTTATAGGTTTCAATGACTCTTGGTATATCATTACCGTGGATACCAACAGCGACTCTCA 22907 Query 119542 TAAACATGTATTGGGGTGTTTC 119563 | | || | ||||||| |||| Sbjct 22908 TGATCAAATGTTGGGGTCTTTC 22929 >seq31 Length=62326 Score = 114 bits (126), Expect = 2e-20 Identities = 353/540 (65%), Gaps = 12/540 (2%) Strand=Plus/Minus Query 118343 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 118402 ||||||||||||||| | || || | || || ||||| |||| ||||| |||||||| Sbjct 2112 CCACATATCAAACTGTAATATCCCATTTGATGCCGGCGAGCCCTGGAATGTTTCATATGG 2053 Query 118403 GCCCTCAACCTCCGCCAATTCGGAGCT--CGCCTCGAGGGCTGCGTGATACATTGTTTCA 118460 |||||| | |||||||| | || ||||| || || || || || || |||||| Sbjct 2052 GCCCTCTTTCATTGCCAATTC--AACTGAGGCCTCAAGTGCAGCATGGTATATAGTTTCA 1995 Query 118461 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATA 118520 || || || ||| | || || ||| | |||||||| | | ||| | | | Sbjct 1994 AATATCTGAATATTTAATGTTTTAGCCATTGCAGAATCAAAAGGTAATCGAAGCTCAGCA 1935 Query 118521 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTC 118580 || | ||| || | ||||| ||||| | ||||||| || |||||| |||| || | Sbjct 1934 AACAAATCTGCCAAGCCTTGTACACCCAAAGCAATTGGACGGTGTCTCTTATTTGAATAT 1875 Query 118581 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 118640 || || | || ||||| | ||| || || | || | ||| | || | Sbjct 1874 TCTGCCGTTTTAACAGGATATTTTGTTACATCAATCACTTTGTTCAAATTCCTTGTCAAG 1815 Query 118641 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCT---TCATTG 118694 || || |||| || | ||||| ||||||| | || | |||| || Sbjct 1814 ACTTTGGTGACAGAGTGCAATTTTTCAAAATCAAATGCAATGGCATCCTCTGTGGTTTTC 1755 Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA-GT 118753 | ||| |||| | || | ||||| | ||| ||||||| || || | || | | | Sbjct 1754 AAATATGTAGGCAATGCAAGAGACGCTAAATTGCACACAGCAGTTTC-TTCTGGTGATGA 1696 Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813 || || | |||||| ||||| |||||| ||| || || || | ||| ||||| || Sbjct 1695 ATATTCAACAATTTCGCAACACAAATTTGAAGACTTTATTGTCCCGATGTTTTTTTGGTT 1636 Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 ||| ||||||||||| || || ||||| ||||| || || || || || ||||| || Sbjct 1635 TGATTTTGTGTTACAGGCGTCTTTGTATAGCATATAAGGACCACCTGTTTCAGTTTGAGA 1576 >seq90 Length=39169 Score = 82.4 bits (90), Expect = 9e-11 Identities = 140/202 (69%), Gaps = 7/202 (3%) Strand=Plus/Minus Query 14150 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA 14209 ||||| |||||||| || ||| | |||||| | ||| ||| ||||||||||| ||| Sbjct 37921 TCAAACCCATCCATTTCTACCAACAATTGATTCAATGTTGTTTCACGTTCATCATTGGCA 37862 Query 14210 -----GGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAA 14264 ||||| || | | | ||||| ||||| | || || |||||||| | || | Sbjct 37861 CCAGTGGCATTCCCCTTGGA--ACGTTGTTTACCAATAGCATCGATTTCATCAACAAACA 37804 Query 14265 CGATACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGA 14324 | || | || ||||||||| ||| | ||| | ||| || ||||| || || | Sbjct 37803 CAATCGAAGGGGCATTTTCACGTGCAGTCTTAAATAAATCACGAACTCTAGATGCTCCAA 37744 Query 14325 CACCCACAAACATCTCCACAAA 14346 |||| |||||||| || ||||| Sbjct 37743 CACCAACAAACATTTCTACAAA 37722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618428304447520