Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq38 116 5e-21
seq31 114 2e-20
seq90 82.4 9e-11
>seq38
Length=58422
Score = 116 bits (128), Expect = 5e-21
Identities = 882/1402 (63%), Gaps = 55/1402 (4%)
Strand=Plus/Plus
Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253
|||||||| || || ||||||||||||||||| ||||| | ||| || || || |||||
Sbjct 21551 GTGTATGGTTCGAAACACTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATT 21610
Query 118254 GGTGCCA-TGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTTCCTTGAGAGCG 118310
|| || | | | |||| ||| | | ||| | || || ||| || || | |
Sbjct 21611 GGAGCAACTAATAAGGA-GTTTCTCATACCATGCTTAGCCAAATT--TTGTTTTAATGTA 21667
Query 118311 TCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 118368
||||| || || || || ||| | | | ||| | ||||||||| | | |||||
Sbjct 21668 TCCCAATCCCATAATTCAG--TTGGTTTTCTGTTCCATAAATCAAACTGTAATAAACCTT 21725
Query 118369 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC----G 118424
| || || || || || | | || || || | || || | | |||||||| |
Sbjct 21726 GAGAGGCAGGGGAGCCTGGATAAGTTTCGTAGGCACCTTCTTCTTTAGCCAATTCAACAG 21785
Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484
|||| || | || || || || || || || ||||| || || | | | ||
Sbjct 21786 AAGCT----TCAACAGCAGCATGGTAAATAGTCTCGAAAATTTGAATGTTTAATTCTCTG 21841
Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 118544
|| || | ||| ||||| | | || | ||||| |||| || | |||||| |||
Sbjct 21842 GCTTCTTGGGAGTCAAATGGTAATCTCAATTCCATAAAGGCATCAGCCAAACCTTGAACA 21901
Query 118545 CCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCTCCA-CGGGATAAA 118602
|| | ||||||| | ||||||||||| || ||| || || ||| | | || |||
Sbjct 21902 CCCAAAGCAATTGGTCTGTGTCTCATATTTGATCTTTCG-GCT-TCTGGAACTGGGTAAT 21959
Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662
|| | || ||||| || || | || |||||| ||||| |||| ||||| | ||
Sbjct 21960 GGTTGCGGTCAATAACTCTGTTCAAGTTACGGGTGACTACCTTGGTGACATCATGTAACT 22019
Query 118663 TTTCGTAATCAAAACTG---CGAGTCTCTTCATTGA---CAT---ACTTAGGAAGG---- 118709
| |||||| || | ||| | | | |||| | | || | || ||
Sbjct 22020 T------ATCAAAGTTGTACCAAGTAT-TACTTTGATCGCTTTCAACAAATGATGGTAAA 22072
Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769
|| || || |||| ||||| |||| | ||||| | ||| || || | ||||||
Sbjct 22073 GCAATGGAGGCCAAGTTACAAACAGCGACTTCATCTGGAGCAGAATATTCAACAATTTCA 22132
Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829
|| ||||| ||| ||||| | |||||||||||||| || || || |||||||
Sbjct 22133 CAACATAAGTTGGAAGATTTAATAATACCCAAGTTCTTTTGGTTGGATTTGTTGTTACAT 22192
Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889
| ||| ||||| | ||| |||| || ||||| || ||||||| | ||||| | |
Sbjct 22193 GAATCTTTGTACAACATAAATGGAGTACCCGTTTCTGTTTGGGCTCCCAAGATAGCGTAC 22252
Query 118890 CAGA---CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTG 118946
|| | | ||| || | | || || | || |||| ||||| | ||
Sbjct 22253 CACAATTTTTGGGC--CTTG-ATGGTCTGTCTGCCACGGTTTTCTTTTTCGTATCTGGTA 22309
Query 118947 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 119006
|| | |||| || || ||||| | || | | ||||| |||| || ||| ||
Sbjct 22310 TATAATTCTTCGAATTCGTCACCGTAAACATCAGCCAAACCTGGGGCCTCATTTGGTGAG 22369
Query 119007 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066
|| | || ||| | ||| | || || | |||||||| | |||||| ||||| |
Sbjct 22370 AACAAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAACAAGTCTGGAATCCATAAA 22429
Query 119067 GCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 119125
|| | ||| | ||| | | | || |||||| | || ||||| | | || |
Sbjct 22430 GCTGGGAACAAATCTCTGGCTCTGA-TTTCTTCTTTACCATGATTCTTTCTGATGTCAAT 22488
Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTAC 119181
|| || | ||| || |||||| ||||| | ||||| || | | ||| |||
Sbjct 22489 GAAATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGCAAAGGCACCAGGTCTTTT 22548
Query 119182 GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241
| |||| | || | ||||| | |||||| || || || | | ||||||||| |
Sbjct 22549 G-TTACCACCTTGATCAACATAACGTGCAGTGTTATTGAACACTCTTACCATTGGAATAA 22607
Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGA 119301
|||||| || ||||| || || ||| || | | | | | | |||||
Sbjct 22608 TACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCAGTAGAACGAATGTTGTGGA 22667
Query 119302 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 119361
| || | |||||| || ||||| | ||||| || || ||| | | | | | |
Sbjct 22668 TATGTAAACCAATCCCTCCTGCACTTTTTGAAATCAAAGCACACGATTTTAAAGTATCAT 22727
Query 119362 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCC 119421
| || || || || || ||| |||| | || | | |||||| |||||||| || |
Sbjct 22728 ATATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAGCATGAAGACATTTGGGGTC 22787
Query 119422 TGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCT 119481
| ||||||||||| ||||| | || | | ||| | || | | ||| ||||||
Sbjct 22788 TTGGTGTACCAGCATTGAACAAGCAAGGAGAACCATGGGTAAAGAATCTTTGAGACATCA 22847
Query 119482 TGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 119541
|| ||||| || | ||| || || || | ||||| ||||| | | ||| | ||
Sbjct 22848 AGTTATAGGTTTCAATGACTCTTGGTATATCATTACCGTGGATACCAACAGCGACTCTCA 22907
Query 119542 TAAACATGTATTGGGGTGTTTC 119563
| | || | ||||||| ||||
Sbjct 22908 TGATCAAATGTTGGGGTCTTTC 22929
>seq31
Length=62326
Score = 114 bits (126), Expect = 2e-20
Identities = 353/540 (65%), Gaps = 12/540 (2%)
Strand=Plus/Minus
Query 118343 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 118402
||||||||||||||| | || || | || || ||||| |||| ||||| ||||||||
Sbjct 2112 CCACATATCAAACTGTAATATCCCATTTGATGCCGGCGAGCCCTGGAATGTTTCATATGG 2053
Query 118403 GCCCTCAACCTCCGCCAATTCGGAGCT--CGCCTCGAGGGCTGCGTGATACATTGTTTCA 118460
|||||| | |||||||| | || ||||| || || || || || || ||||||
Sbjct 2052 GCCCTCTTTCATTGCCAATTC--AACTGAGGCCTCAAGTGCAGCATGGTATATAGTTTCA 1995
Query 118461 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATA 118520
|| || || ||| | || || ||| | |||||||| | | ||| | | |
Sbjct 1994 AATATCTGAATATTTAATGTTTTAGCCATTGCAGAATCAAAAGGTAATCGAAGCTCAGCA 1935
Query 118521 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTC 118580
|| | ||| || | ||||| ||||| | ||||||| || |||||| |||| || |
Sbjct 1934 AACAAATCTGCCAAGCCTTGTACACCCAAAGCAATTGGACGGTGTCTCTTATTTGAATAT 1875
Query 118581 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 118640
|| || | || ||||| | ||| || || | || | ||| | || |
Sbjct 1874 TCTGCCGTTTTAACAGGATATTTTGTTACATCAATCACTTTGTTCAAATTCCTTGTCAAG 1815
Query 118641 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCT---TCATTG 118694
|| || |||| || | ||||| ||||||| | || | |||| ||
Sbjct 1814 ACTTTGGTGACAGAGTGCAATTTTTCAAAATCAAATGCAATGGCATCCTCTGTGGTTTTC 1755
Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA-GT 118753
| ||| |||| | || | ||||| | ||| ||||||| || || | || | | |
Sbjct 1754 AAATATGTAGGCAATGCAAGAGACGCTAAATTGCACACAGCAGTTTC-TTCTGGTGATGA 1696
Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813
|| || | |||||| ||||| |||||| ||| || || || | ||| ||||| ||
Sbjct 1695 ATATTCAACAATTTCGCAACACAAATTTGAAGACTTTATTGTCCCGATGTTTTTTTGGTT 1636
Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873
||| ||||||||||| || || ||||| ||||| || || || || || ||||| ||
Sbjct 1635 TGATTTTGTGTTACAGGCGTCTTTGTATAGCATATAAGGACCACCTGTTTCAGTTTGAGA 1576
>seq90
Length=39169
Score = 82.4 bits (90), Expect = 9e-11
Identities = 140/202 (69%), Gaps = 7/202 (3%)
Strand=Plus/Minus
Query 14150 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA 14209
||||| |||||||| || ||| | |||||| | ||| ||| ||||||||||| |||
Sbjct 37921 TCAAACCCATCCATTTCTACCAACAATTGATTCAATGTTGTTTCACGTTCATCATTGGCA 37862
Query 14210 -----GGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAA 14264
||||| || | | | ||||| ||||| | || || |||||||| | || |
Sbjct 37861 CCAGTGGCATTCCCCTTGGA--ACGTTGTTTACCAATAGCATCGATTTCATCAACAAACA 37804
Query 14265 CGATACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGA 14324
| || | || ||||||||| ||| | ||| | ||| || ||||| || || |
Sbjct 37803 CAATCGAAGGGGCATTTTCACGTGCAGTCTTAAATAAATCACGAACTCTAGATGCTCCAA 37744
Query 14325 CACCCACAAACATCTCCACAAA 14346
|||| |||||||| || |||||
Sbjct 37743 CACCAACAAACATTTCTACAAA 37722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618428304447520
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