Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq38 513 2e-140 seq243 232 9e-56 seq31 187 3e-42 seq2 178 2e-39 >seq38 Length=58422 Score = 513 bits (568), Expect = 2e-140 Identities = 1463/2234 (65%), Gaps = 36/2234 (2%) Strand=Plus/Plus Query 76778 CAATG-TAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 ||||| |||| ||||| | || | || | || ||| | | || ||||||||||| | Sbjct 21156 CAATGGTAAATTGAATAGCAGCACTGGCAGCTTGTGTTCTCAAGTAATACATACCAGTCT 21215 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGG 76896 | | ||| |||| || ||||||||||| || |||| || | || || Sbjct 21216 TCAAACCTTTCTTCCAACCATAGAAATGCATACTGGTCAACTTACCCATTGTTGGGTCTT 21275 Query 76897 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 76956 || ||||| || | || ||| |||||| || || || |||||||||| ||||| | Sbjct 21276 TGATGTGAATGTTTAATGATTGAGATTGATCAATAAATGCAGCTCTATCAGCAGCCATGT 21335 Query 76957 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 77016 ||||| |||||| | |||||||| | ||| ||| | | | || || ||||| | Sbjct 21336 CGATAATATGCTTTTGTGAGATTTCCCAGACAGTCTTGTACAATGCCTTAATTTCATCAG 21395 Query 77017 GAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCAT 77073 ||| ||||| | |||||| ||||| | | ||||| || | || ||| ||| Sbjct 21396 GAATGTTTGGCAAAGCTTGAATAGAACCGTTGTTAGCAATAATACTACTTTTCATAGCAT 21455 Query 77074 CATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATT 77133 ||||||| | | || ||| | | | | || ||||| || |||||||||| Sbjct 21456 CATTCCAGACACCCAAATCAACCAAATCCTTCAACAAATATGGATTGACAATTTGAAATT 21515 Query 77134 CTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 77193 |||| | || ||||| | | |||||| ||| || |||||||| | | | ||||||| Sbjct 21516 CTCCTGCTAACACTCTTCTGGAGTAAATGTTAGAAGTGTATGGTTCGAAACACTCATTGT 21575 Query 77194 TTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGA 77253 | ||||||||||| | ||||||||||| ||||| || || || ||||| ||||| | Sbjct 21576 TACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCAACTAATAAGGAGTTTCTCA 21635 Query 77254 GACCATGTGTTCTGATTTTATCTTTTAGATATTTCC-AATCCCAAAGATCTGAAGGTACA 77312 |||||| | | || | ||||| || | ||| ||||||| | || | ||| Sbjct 21636 TACCATGCTTAGCCAAATTTTGTTTTA-ATGTATCCCAATCCCATAATTCAGTTGGTTTT 21694 Query 77313 ACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCA 77372 | ||| | ||| | |||| | || | | ||| || || ||| ||||| Sbjct 21695 CTGTTCCATAAATCAAACTGTAATAAACCTTGAGAGGCAGGGGAGCCTGGATAAGTTTCG 21754 Query 77373 TAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTT 77432 || | |||||| || ||| | |||| | ||||| | || | | ||||| || Sbjct 21755 TAGGCACCTTCTTCTTTAGCCAATTCAACAGAAGCTTCAACAGCAGCATGGTAAATAGTC 21814 Query 77433 TCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGA 77492 |||||||| | | || | ||| ||||| ||||| || |||| | || Sbjct 21815 TCGAAAATTTGAATGTTTAATTCTCTGGCTTCTTGGGAGTCAAATGG-TAATCTCAATTC 21873 Query 77493 -ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 77551 ||||||||||| || || || ||||| || | | |||| ||||| |||||| |||| || Sbjct 21874 CATAAAGGCATCAGCCAAACCTTGAACACCCAAAGCAATTGGTCTGTGTCTCATATTTGA 21933 Query 77552 AATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAAC 77611 ||| |||||||||| || |||| || ||| |||| | | || | || | Sbjct 21934 TCTTTCGGCTTCTGGAACTGGGTAATGGTTGCGGTCAATAACTCTGTTCAAGTTACGGGT 21993 Query 77612 AACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT-----CAAATCTTCCATCTAT---- 77662 ||||| || || || | || ||| ||| | ||| | || | | || Sbjct 21994 GACTACCTTGGTGACATCATGTAACTTATCAAAGTTGTACCAAGTATTACTTTGATCGCT 22053 Query 77663 ---AACAAAC-ATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGT 77718 |||||| ||| | ||||| || || || | |||||||| || || |||| | Sbjct 22054 TTCAACAAATGATGGT-AAAGCAATGGAGGCCAAGTTACAAACAGCGACTTCATCTGGAG 22112 Query 77719 TGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTT 77778 | ||||| | || || ||||| || | |||| ||| | |||| || | || Sbjct 22113 CAGAATATTCAACAATTTCACAACATAAGTTGGAAGATTTAATAATACCCAAGTTCTTTT 22172 Query 77779 GGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCT 77838 ||||| || || || ||||| || || || | ||||| ||||| || ||||| | | Sbjct 22173 GGTTGGATTTGTTGTTACATGAATCTTTGTACAACATAAATGGAGTACCCGTTTCTGTTT 22232 Query 77839 GTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTCT 77898 | | | | | |||| | ||| | | || || || | | || || | | Sbjct 22233 GGGCTCCCAAGATAGCGTACCACAATTTTTGGGCCTTGATGGTCTGTCTGCCACGGTTTT 22292 Query 77899 CTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAG 77958 || |||| ||| ||||||| ||| ||||| || || |||||||| |||| || | Sbjct 22293 CTTTTTCGTATCTGGTATATAATTCTTCGAATTCGTCACCGTAAACATCAGCCAAACCTG 22352 Query 77959 GGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGA 78018 || |||||||| | | ||| | ||| ||||| | || | |||| |||||| || | Sbjct 22353 GGGCCTCATTTGGTGAGAACAAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAACA 22412 Query 78019 GATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTAT 78078 || || ||||||| ||| || | ||||| || ||| |||||| || || || Sbjct 22413 AGTCTGGAATCCATAAAGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTACCATGAT 22472 Query 78079 TCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCA 78138 ||||| | | || | || || | || ||| ||||||||||||| || | || | Sbjct 22473 TCTTTCTGATGTCAATGAAATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGCAA 22532 Query 78139 TAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTC 78198 | ||||||| ||| ||||| || ||||| | ||| | || |||||||| | |||| Sbjct 22533 AGGCACCAGGTCTTTTGTTACCACCTTGATCAACATAACGTGCAGTGTTATTGAACACTC 22592 Query 78199 TCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTG 78258 | | ||||||||||||||| ||||| || ||||| || |||| ||| ||| ||| | | Sbjct 22593 TTACCATTGGAATAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCAGTAG 22652 Query 78259 CGCGAATATTACTAATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 ||||| || ||||||| || || |||||||| | || || || | ||| Sbjct 22653 AACGAATGTT----GTGGATATGTAAACCAATCCCTCCTGCACTTTTTGAAATCAAAGCA 22708 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 || ||| || ||||| || ||||| || ||| |||||| |||| ||| | || Sbjct 22709 CACGATTTTAAAGTATCATATATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAG 22768 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || ||||||||| | || || ||||| || || ||||| |||| ||| Sbjct 22769 CATGAAGACATTTGGGGTCTTGGTGTACCAGCATTGAACAAGCAAGGAGAACCATGGGTA 22828 Query 78435 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATT--GAT 78492 || || ||| ||| | | || || |||||||| || | ||| | |||| | Sbjct 22829 AAGAATCTTTGAGACATCAAGTTATAGGTTTCAATGACTCTTGGTATAT--CATTACCGT 22886 Query 78493 GAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTA 78552 | || || || || || | ||| | || ||| || |||||||| | |||| || | Sbjct 22887 GGATACCAACAGCGACTCTCATGATCAAATGTTGGGGTCTTTCGGCAACCTTACCGTTGA 22946 Query 78553 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 78612 | ||||| || ||| ||||||||||||| || |||||||| ||||| ||| |||| Sbjct 22947 TACGTAACAAATAAGATCTTTCCAAAGTTTTGAACCCAAAATAATTGTAGCTAAAATCTC 23006 Query 78613 TCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAG 78672 | ||||||| ||| | || |||| || ||||| || || ||| ||| | ||| Sbjct 23007 TGTCGTAAACAATGGCCGAGTTTAATTCATCTTCGTGTTCCATAATAATGT-CATAGGTT 23065 Query 78673 TAGTT-GAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCT 78731 | || ||||| |||||||| | | ||| | |||||||||| ||| | | ||||||| Sbjct 23066 TCCTTGGAAATCATAGGAGAGTGCAACCCAGTCTTAGGATTAATATACTCATATAAATCC 23125 Query 78732 TCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTT 78791 | ||| | | | |||| | |||| |||||||| ||| ||||| || ||||| Sbjct 23126 TTAGATACTTTGGAATACTGTTTGGTGGTTTGCTTGTGTAAATTTGATACGGCAATTCTA 23185 Query 78792 GCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCT 78851 || |||| | ||||||||||||||| ||| || || || || |||||||| || Sbjct 23186 GCGGCTAACACAGCATAATCAGGATGAATTGTTGTCATTGTAGCAGCAATTTCTGCAGCC 23245 Query 78852 AAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCG 78911 || |||| ||||| ||||| || ||||| | || | ||| |||||||| || Sbjct 23246 AAGTTATCCAACTCGATAGTAGTAACCCCCTGGTAAACACCTGATATAACTTTTTGGGTA 23305 Query 78912 ATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAATACGAGAT 78971 || || || || || | | || || || ||||||||| || || | || Sbjct 23306 ATAGCAACTGGTTCAACGTGATTTGGATTTAAACCGTAACATAATCTTTGAACTCTAGCG 23365 Query 78972 GTGATTTTATCAAA 78985 |||||||| ||||| Sbjct 23366 GTGATTTTGTCAAA 23379 >seq243 Length=19219 Score = 232 bits (256), Expect = 9e-56 Identities = 594/896 (66%), Gaps = 20/896 (2%) Strand=Plus/Plus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 |||||| || |||||| || || || | ||| || || ||||| || || || | Sbjct 8821 CATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGC 8880 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956 ||| || || |||||||| ||||||||||||||| |||| || | ||| || || Sbjct 8881 CAAAGAAATGTTTTCCATGAAATCAAATGGATTAGTAACATTGTATACTTTCTTGTTACC 8940 Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016 ||| | | | || |||||| || |||||||| || ||| ||||| | ||| || Sbjct 8941 TAAGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTT 9000 Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076 ||| || | | ||||| ||||| || |||| |||||| || | | ||||| Sbjct 9001 CATACCCAACAAGGACACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACATCAACAGC 9060 Query 48077 ATCCACTATTATCGATGTT----ACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAA 48132 || | || || || || || | || | |||| | |||||| || Sbjct 9061 TTC-AGTAATA---ATTTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCAA 9116 Query 48133 ACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAA 48192 ||| |||||| ||||| ||| || | |||||||||||| | ||| || ||||| || | Sbjct 9117 ACAATAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGA 9176 Query 48193 ATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAG 48252 | || | || ||||||| || | ||||| | ||| || || | || || || ||| Sbjct 9177 AAGTCAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCAC 9236 Query 48253 AAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCT---T 48309 |||||| || ||||| || || ||||| || | ||| || || || |||| | Sbjct 9237 TAAAGAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCAT 9296 Query 48310 CGTTGTGTATCCACCGTTG--TGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTC 48367 | | || ||||| ||| ||||| ||||| ||||| | | ||| || || | | Sbjct 9297 CATCTTGAATCCA--TTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGC 9354 Query 48368 TATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAG 48427 || |||||||| | | | ||| | |||||| | |||||| || ||||| | Sbjct 9355 AATGGCATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAA 9414 Query 48428 ACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGC 48487 | || |||| || ||||| ||||| || || || || ||||| || || | || Sbjct 9415 AGAGTAGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGC 9474 Query 48488 TTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATC 48547 ||| | | || || || || | || |||| || || ||| || || ||||| Sbjct 9475 TTCGGGAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATC 9534 Query 48548 ACTAGCAGCAAAAAATGCTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCAGT- 48605 | |||||| |||||||| ||||| | | | | ||||||| |||| || | ||| | Sbjct 9535 AGAAGCAGCGAAAAATGCCAATAC-TCTAGAGACAAAATATCTTTCATTTTCATTCAATT 9593 Query 48606 --TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATG 48663 ||||||||||||| | |||||| | ||| | |||||| || ||||| || || | Sbjct 9594 TGTTATTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAAGAAG 9653 Query 48664 CCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACA 48719 | || ||||| ||||| | ||||| || ||| |||| ||||||||| || ||| Sbjct 9654 CTTCAGCTTTCTTATAAAAGTTCCAAATTTCATGGTATCTGATTGGGAACATCACA 9709 >seq31 Length=62326 Score = 187 bits (206), Expect = 3e-42 Identities = 475/710 (67%), Gaps = 22/710 (3%) Strand=Plus/Minus Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 |||| |||||||| ||||| ||||||||| || || | || ||| | || Sbjct 1524 CTCTGATTCATATTTGCAATATAATTTTTCAAATTCCTCACCATACACGTCACTTAGACC 1465 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAA 78016 | | |||||| || | | ||| | ||||||| || || || || ||||||||||| Sbjct 1464 AAGAGCTTCATTGGGCGAAAACAAAGTCCAGTCAGAATTGTCTTTCACACGTTTCATAAA 1405 Query 78017 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGT 78076 | || |||||||||| || ||| | ||||| ||||| ||||||||| || Sbjct 1404 CAAGTCGGGTATCCATAATCCATAAAACAAATCTCTAGTTCTCATTTCTTCATTCCCGTG 1345 Query 78077 ATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGC 78136 ||| ||| | | || | | || | ||||||| |||||||||||||| |||||| || Sbjct 1344 ATTTTTTCTCATTTCTAAGATATCAAAAATATCACCATGCCATGGTTCTATATATATGGC 1285 Query 78137 CATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAAC 78196 | |||| || |||||| || || ||||| | |||||| || || ||||| ||||| Sbjct 1284 AAATGCTCCTGGACGTTTACCCCCACCTTGATCGACATATCTTGCAGTATTATTGTAAAC 1225 Query 78197 TCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACT 78256 | |||||| || | | ||||| || | ||||| || |||| |||||| ||| | Sbjct 1224 ACGCAACATGGGTACTAACCCGTTTGAACTACCATTGGTGCCAGCAATATACGCACCATT 1165 Query 78257 TGCGCGAATAT--TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG-C 78313 | | ||||| | | ||| ||| ||||||||||||| ||| || ||||||| | Sbjct 1164 GGATCTAATATTGTGCACATGAATA--CCTATTCCTCCTGATGCCTTGGAAATTAGAGCC 1107 Query 78314 GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAA 78373 || | || | || | | | || || || || || || ||||| | || || Sbjct 1106 GCCTC-ATTAAGAGTCTTGAATATCCCATCGATTGAATCTTCTTTCATGGCTACTAGGAA 1048 Query 78374 ACA----GCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGG-AGATGCA 78428 ||| | || | | |||| || || | || |||||| ||||||| || ||| ||| Sbjct 1047 ACATGATGATAAATAGTTGA--AT--TCACTACCAGCATTATATAATGTAGGCAGA-GCA 993 Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTT---CAATAGCTGATTCTATGTCC 78485 || |||| | || | || | || | ||||||| |||| || |||| | || Sbjct 992 TGAATAAAGTACTTCTGGGACATTAAGTCATATGTTTCCACAATGGC--ATTC-AAATCG 936 Query 78486 CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTA 78545 || |||||||||| ||||||||||| || | || ||| || |||| | | | Sbjct 935 TTCTGGTGAATTCCTATGGCTACACGCATGAATAAATACTGGGGCAATTCAGCAACTTCA 876 Query 78546 TTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATA 78595 | ||||| || | |||||| ||||||| ||||||| |||||||| Sbjct 875 CCACCCATTTTTAAAAGGTATGAGCTTTCCAATGTTTTAATCCCAAAATA 826 >seq2 Length=135431 Score = 178 bits (196), Expect = 2e-39 Identities = 542/826 (66%), Gaps = 14/826 (2%) Strand=Plus/Plus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || ||| || | || || || ||||||||||| || |||| || |||||| Sbjct 59361 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAGATATTT 59420 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| ||||||||||||||| |||| ||| |||||| ||| || | | Sbjct 59421 TCCATGAAATCAAATGGATTAGTAACATTGTAATACTTTTTATTTCCAAAGGCCACTAAT 59480 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-TAAG 48028 | || ||| ||||| ||||| | ||| ||||| |||||||||||||| | ||| Sbjct 59481 AATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATAAA 59540 Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 || |||| || || || | | | | | || || ||||| ||||| || || || Sbjct 59541 GATA-CTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGCCTCGGTAATGAT 59599 Query 48089 CGATGTTACCGTTTCCTC-ACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAA 48147 | | | | || || | ||| || | |||| || | ||||| ||| Sbjct 59600 TT-TCTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAAACAGGCAT 59658 Query 48148 AATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCA 48207 |||| |||| ||||| |||| | ||| ||||| || |||||||| | || |||| Sbjct 59659 AATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAATCCTGGCA 59718 Query 48208 TTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTT 48267 | | || | ||| || | ||| || ||||| || || || ||| || ||||| |||| Sbjct 59719 TCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAATATACCTT 59778 Query 48268 CTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACC 48324 | ||||| ||||| || | |||||| | || || || | || | ||||||| Sbjct 59779 CAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTCGTCTTGAATCCACC 59838 Query 48325 -GTTGTGCCCAATCAGCCTTCTTCTTTACACAA-GGCATTGTTTCTATAGCATTAAAGAG 48382 | || |||||||| || || |||| | || || || |||| ||||||||||| | Sbjct 59839 TGATG-GCCCAATCGGCTTT-TTCTCTGATGAATGGGATATTTTCAATAGCATTAAACAA 59896 Query 48383 AAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGA 48442 ||||| ||| | || || | ||| || || ||||| | ||| | || || Sbjct 59897 AAAGTCCGCTTCTTCTGGGTCCTTGAAGTATGTTTCGATTAACAACGAATAAGTCTCTGA 59956 Query 48443 GTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502 || || ||||| || |||||||| ||| | | || |||| || ||||| Sbjct 59957 ATGGATGTTTTCCATCATGATCTGAAACTTGTATACCAGTTGAGCCTCTGGTATTTGTAC 60016 Query 48503 CTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAA 48562 || | ||| || ||| |||| |||||||| || || ||||| |||||||| || Sbjct 60017 TTCAGCACAGAAATTTTCCACCAAGTTCTCATTGACAATACCATCCGAGGCAGCAAAGAA 60076 Query 48563 TGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT---CCAGTCATT 48619 ||| || || | || ||| || |||| || ||| |||||| |||||| Sbjct 60077 TGCCAACACTCGGGAGATGAAAAATCTTTCATTTTCGTTCATTTTATTGTTCCAGTCGGC 60136 Query 48620 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCC 48665 | |||||| || || | ||||||||||||||||| || ||| Sbjct 60137 CAAATCTTTACTTAAGTCAAGCTCTTCAGCTGTCCAAAACGAGGCC 60182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694661054442880