Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq65 131 4e-25 seq4 96.9 7e-15 >seq65 Length=44577 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | || || || | |||||| || ||||| Sbjct 11380 TTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAA 11439 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || || | ||||||||| |||||||| || |||||||| || || | || || | Sbjct 11440 AATTAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATTTTGGACTTGACATT 11499 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| | ||| || || ||||| || || ||||| || Sbjct 11500 GTCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATGGTTTTACCAGTTAAGGTCTTGAC 11559 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 11560 GAAAATTTGCAT 11571 >seq4 Length=109863 Score = 96.9 bits (106), Expect = 7e-15 Identities = 146/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 316990 TCATGCTCAACATATGCAGTTTTCAGAAT-ATCCTTCGTCGGGAACCCTTCCAACTGACC 317048 || || |||||||| | ||||| | | | ||| | || ||||| ||||| | ||||| Sbjct 72491 TCGTGTTCAACATAAACGGTTTT-ACATTCATCTTGAGTTGGGAAACCTTCAACTTGACC 72433 Query 317049 GTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATA 317108 ||| |||| || ||||||| || || || ||||||||||| || || || | |||||| Sbjct 72432 GTTGGCAATAGCTCTCATCAAAGTAGATTTACCAGCACCATTTGGACCACACAAACCATA 72373 Query 317109 ---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATA 317165 | |||| |||| | | || |||| ||||||| | ||||| ||||||| Sbjct 72372 TCTTCTGTTTC---TCTTTAATCTGAATTGGGTCTTGTTCAACAAGATCTTGGCACCATA 72316 Query 317166 TGCCAGAGAGAACTCACAATCACA 317189 |||| |||||| ||||||| ||| Sbjct 72315 AGCCAAAGAGAATTCACAATTACA 72292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046727237079368