Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq243 289 3e-73 seq2 197 1e-45 >seq243 Length=19219 Score = 289 bits (320), Expect = 3e-73 Identities = 604/892 (68%), Gaps = 26/892 (3%) Strand=Plus/Plus Query 23158 TTTTAAAAATCTTCATCTAAAGTGAATT--TCA-CTGCTTTAT-CACTATT-----CATA 23208 ||||| ||||||||||| || ||||| ||| || |||| | | || || |||| Sbjct 8765 TTTTAGAAATCTTCATCAAAGGTGAAAGCATCAGCTTCTTTGTTCTCTGTTTTGGCCATA 8824 Query 23209 ACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAAT 23268 ||||| |||||| || || ||| | | |||| || ||||| |||||||| | || Sbjct 8825 ACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAA 8884 Query 23269 GATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAG-CTT--TACATGAT 23325 || || |||||||| |||||||||||||||| | ||| ||||| ||| ||| | Sbjct 8885 GAAATGTTTTCCATGAAATCAAATGGATTAGTAACATTGTATACTTTCTTGTTACCT--- 8941 Query 23326 AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTT 23385 || || || | ||||| || || |||||||| |||||||||||||| | | |||| Sbjct 8942 AAGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTTC 9001 Query 23386 ATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCA 23445 ||||| | | ||||||| ||||| ||| | ||| |||| |||||| Sbjct 9002 ATACCCAACAAGGACACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACATCAACAGCT 9061 Query 23446 TCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAAT 23505 || |||| |||| ||| || ||| | ||| | || |||| ||||||| Sbjct 9062 TCAGTAATAATTTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCAAACAAT 9121 Query 23506 AAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTT 23565 ||||| ||||| ||| |||| |||||||| || | |||||| || || || || || Sbjct 9122 AAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAAGTC 9181 Query 23566 AATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAG 23625 || ||||||||||| |||| ||||| | ||| || || | ||||||||| || |||| Sbjct 9182 AACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTAAAG 9241 Query 23626 AAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCA 23685 |||||||| ||||| || |||||||| || | | | |||| | || | || ||| Sbjct 9242 AAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCATCATCT 9301 Query 23686 GAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCT 23745 ||||||||| | | ||| | ||| ||| || | ||| ||| | |||| || Sbjct 9302 TGAATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCAATGGCA 9361 Query 23746 TTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATAC 23805 || || | || ||||| | |||| |||| || || ||||||| |||| || Sbjct 9362 TTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAAGAGTAG 9421 Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865 |||| |||||||| ||||| || || || || || || || || | ||||| | Sbjct 9422 GTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCTTCGGGA 9481 Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925 | |||||| ||| | | || ||| | ||| ||||| ||||||||||||| |||| Sbjct 9482 AGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCAGAAGCA 9541 Query 23926 GCAAAGAAAGCAAGAACATATTTT----ATAAAATGTCTTTCA---TCAGTTGATAATTT 23978 || || || || | ||| | | | ||||| ||||||| ||| | || || Sbjct 9542 GCGAAAAATGCCA----ATACTCTAGAGACAAAATATCTTTCATTTTCATTCAATTTGTT 9597 Query 23979 TTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030 ||||| |||| | |||||| ||||| | ||| || | ||||| ||| Sbjct 9598 ATTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAA 9649 >seq2 Length=135431 Score = 197 bits (218), Expect = 1e-45 Identities = 295/416 (71%), Gaps = 2/416 (0%) Strand=Plus/Plus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 |||| || ||||| || ||||| | || || ||||||||||| |||||||||||||||| Sbjct 59383 TTTCAAAGAAATTAGTTTTACCAGCCAAGGAGATATTTTCCATGAAATCAAATGGATTAG 59442 Query 23300 AAGTATTATA-TACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCA 23358 | ||| || ||| |||| | || || ||| | | ||| || ||||||||| Sbjct 59443 TAACATTGTAATACTT-TTTATTTCCAAAGGCCACTAATAATCGATCAGCAACAAATTCA 59501 Query 23359 ATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATAT 23418 | ||| || |||||||| ||| | || || || | || |||||||| |||||| Sbjct 59502 ACATACTGGCACATCAAGTCACAATTCATTCCCAATAAAGATACTGGAAGCGCATCGCTG 59561 Query 23419 AAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCACTA 23478 || || ||| ||||| | ||||| || |||| |||| |||| | |||| | | Sbjct 59562 AAATATTTTTTCTCAATAGTCACAGCCTCGGTAATGATTTTCTCAATGATTTCTGGAGAA 59621 Query 23479 GGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCC 23538 ||| || ||||||||| || || ||||| ||| |||| || | ||||| || Sbjct 59622 GGTTTATTCTTTAAATACGAGAATAACAAACAGGCATAATCCGTGTGAATCCCTTCGTCT 59681 Query 23539 CTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAA 23598 | | |||||||||||| |||||||| ||||||||||| || || | ||| || | ||| Sbjct 59682 CGGCAAATCAATTCATTCGAAAATGTCAATCCTGGCATCAACCCCCTTTTCTTTAACCAG 59741 Query 23599 AATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCAC 23654 || ||||| ||||| || || || || ||||| ||||| || ||||| || || Sbjct 59742 AAAATTGCTGCAAACGAACCACTGAAAAATATACCTTCAACGGCAGCAAACGCAAC 59797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521482185408800