Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq57 127 3e-24 seq4 98.7 1e-15 >seq57 Length=48952 Score = 127 bits (140), Expect = 3e-24 Identities = 306/475 (64%), Gaps = 51/475 (11%) Strand=Plus/Minus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || | | Sbjct 17439 AAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCAGAATATAAAG 17380 Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 |||| || |||| || ||||| | ||||| | ||| | |||| | | | Sbjct 17379 ATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATGTTATTAAAAAAT 17320 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 |||||||||| || | ||| | | ||| | ||| | || ||||||||| | ||| | | Sbjct 17319 TGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAATCCACCAGATTTTG 17260 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG--------------- 50697 | ||| | |||||||| |||||||| || ||||||||||||| Sbjct 17259 CTAAAATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTATGTGAACTTCCCTACAT 17200 Query 50698 -----CCA--------------CAGACAATGT-----------------TTTATCCTGTC 50721 ||| || |||| | ||||| ||| Sbjct 17199 CTCAACCAGACTCAAATAATCCCAAACAAGCTAAAACCGCCAAACCAAAATTATCTTGTT 17140 Query 50722 AATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACG 50781 || ||||||||||| ||||||||| ||||| || || || || | || || |||| Sbjct 17139 TATTGTATCAAAGATCTTGTGATATGGGGTTAGGTGTACCATTTAATATTGCATCCTACG 17080 Query 50782 CTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATA 50841 | || ||||| | |||| || || | || |||||| | || ||||| ||||||| Sbjct 17079 CGTTGTTAACTAAGATGATTGCACATGTGGTGGATATGGACTGTGGCGAATTCATTCATA 17020 Query 50842 CGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGCAATT 50896 | ||||| || || ||| |||| | ||||| | ||||| |||||||| ||||| Sbjct 17019 CTTTAGGTGATGCACATGTTTATTTGGATCATATAGATGCCTTAAAGGAACAATT 16965 >seq4 Length=109863 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777 || ||| ||| | | ||| | ||||| | ||| |||| || ||||| ||||| || Sbjct 39669 GTAAAAGTAAGAATGAGAACAACTAAAGTTCCACAAATTGGGGATAAGTTTGCCTCGAG- 39611 Query 63778 ACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAA 63836 ||| | |||||||||||| |||| ||| ||| |||| ||||||||||||||||| Sbjct 39610 ACACGGTCAAAAAGGTACTATTGGTGTGACATATAGACATGAAGATATGCCTTTTACAGC 39551 Query 63837 AGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896 || ||||| || || ||| | | ||||| || || ||| |||| ||||||||| || Sbjct 39550 CGAAGGTATTGTTCCAGATTTAATTATCAACCCTCATGCTATTCCATCTCGTATGACGGT 39491 Query 63897 T 63897 | Sbjct 39490 T 39490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667067762111520