Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1 221 1e-52
>seq1
Length=2936865
Score = 221 bits (244), Expect = 1e-52
Identities = 593/897 (66%), Gaps = 21/897 (2%)
Strand=Plus/Minus
Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960
|||||| | |||| |||||| ||| | ||||| ||||| || || || || | ||
Sbjct 2540287 AACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAA 2540228
Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCC 16018
|| || |||||||||||||| || |||||||| | || ||| | || | |||||
Sbjct 2540227 GGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTTT-ATTACCCA 2540169
Query 16019 AGTTCCGTAAC---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAA 16075
| | ||| ||||||||| || |||||||| | ||||||||||||||| | |||
Sbjct 2540168 AA----GCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAA 2540113
Query 16076 TTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACC 16135
|| || || | | | || || | ||| | || || |||| || ||| || ||||
Sbjct 2540112 TTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACA 2540053
Query 16136 GCTTCTTTAATGATATCGGTGGCTCGTGTTT-CAGACGGTGTATGGTTTAGGTGTTTAAA 16194
||||| |||| || || | | ||| | ||| |||| | || || |||
Sbjct 2540052 GCTTCAGTAATAAT-TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGGGCAAA 2539994
Query 16195 CATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAA 16254
| || ||| || ||||| |||| |||||||| | | || | ||||||||| ||
Sbjct 2539993 TAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAA 2539934
Query 16255 AGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGA 16314
|||||| |||||||| |||| |||||| |||||||| || | |||||||| ||
Sbjct 2539933 AGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACT 2539874
Query 16315 AAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTT 16374
|| || ||||| ||||||| || ||||| | |||| || || || || ||
Sbjct 2539873 GAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGA 2539814
Query 16375 ATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTAT 16434
|| | |||||| | |||| || || || | ||| || || ||||| ||
Sbjct 2539813 ATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAAT 2539754
Query 16435 GGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494
|| || || || || ||| | ||| | ||||| || ||||||| |||
Sbjct 2539753 AGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGA 2539694
Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554
||| |||||||||| ||||| || || || || ||||| ||||| || ||| ||
Sbjct 2539693 GTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTC 2539634
Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614
| ||||| ||||| | |||| |||| ||| ||||||||| || ||||| ||
Sbjct 2539633 TGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGA 2539574
Query 16615 TGCAGCAAAAAACGCCAATA-TGTGC--TTAATGAAA---TATTTTTCGTCAGATGTAAG 16668
||| ||||| || ||||| | | | | ||| |||| | || |||| || |
Sbjct 2539573 TGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTC 2539514
Query 16669 AATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728
| |||||| | | |||||| || ||| | |||||| | ||||| || |||
Sbjct 2539513 TCT---CCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGC 2539457
Query 16729 CACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTA 16785
| | || || || ||||||| ||| || |||| |||| || ||||| | ||| ||
Sbjct 2539456 CTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATA 2539400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414348858560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |