Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1 221 1e-52 >seq1 Length=2936865 Score = 221 bits (244), Expect = 1e-52 Identities = 593/897 (66%), Gaps = 21/897 (2%) Strand=Plus/Minus Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960 |||||| | |||| |||||| ||| | ||||| ||||| || || || || | || Sbjct 2540287 AACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAA 2540228 Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCC 16018 || || |||||||||||||| || |||||||| | || ||| | || | ||||| Sbjct 2540227 GGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTTT-ATTACCCA 2540169 Query 16019 AGTTCCGTAAC---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAA 16075 | | ||| ||||||||| || |||||||| | ||||||||||||||| | ||| Sbjct 2540168 AA----GCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAA 2540113 Query 16076 TTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACC 16135 || || || | | | || || | ||| | || || |||| || ||| || |||| Sbjct 2540112 TTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACA 2540053 Query 16136 GCTTCTTTAATGATATCGGTGGCTCGTGTTT-CAGACGGTGTATGGTTTAGGTGTTTAAA 16194 ||||| |||| || || | | ||| | ||| |||| | || || ||| Sbjct 2540052 GCTTCAGTAATAAT-TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGGGCAAA 2539994 Query 16195 CATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAA 16254 | || ||| || ||||| |||| |||||||| | | || | ||||||||| || Sbjct 2539993 TAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAA 2539934 Query 16255 AGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGA 16314 |||||| |||||||| |||| |||||| |||||||| || | |||||||| || Sbjct 2539933 AGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACT 2539874 Query 16315 AAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTT 16374 || || ||||| ||||||| || ||||| | |||| || || || || || Sbjct 2539873 GAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGA 2539814 Query 16375 ATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTAT 16434 || | |||||| | |||| || || || | ||| || || ||||| || Sbjct 2539813 ATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAAT 2539754 Query 16435 GGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494 || || || || || ||| | ||| | ||||| || ||||||| ||| Sbjct 2539753 AGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGA 2539694 Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554 ||| |||||||||| ||||| || || || || ||||| ||||| || ||| || Sbjct 2539693 GTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTC 2539634 Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614 | ||||| ||||| | |||| |||| ||| ||||||||| || ||||| || Sbjct 2539633 TGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGA 2539574 Query 16615 TGCAGCAAAAAACGCCAATA-TGTGC--TTAATGAAA---TATTTTTCGTCAGATGTAAG 16668 ||| ||||| || ||||| | | | | ||| |||| | || |||| || | Sbjct 2539573 TGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTC 2539514 Query 16669 AATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728 | |||||| | | |||||| || ||| | |||||| | ||||| || ||| Sbjct 2539513 TCT---CCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGC 2539457 Query 16729 CACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTA 16785 | | || || || ||||||| ||| || |||| |||| || ||||| | ||| || Sbjct 2539456 CTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATA 2539400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414348858560