Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=2936865 Score = 89.7 bits (98), Expect = 4e-13 Identities = 275/413 (67%), Gaps = 13/413 (3%) Strand=Plus/Plus Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 || |||||||||| ||||||||||| || || || |||| || | || | | | Sbjct 1312708 ACGTAAAATTGACAAAATACATGACATGGAGGTAATGCCATCAATGGGAAATCAGGAGGA 1312767 Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||| |||| | || |||| ||| || || || || | | | || | Sbjct 1312768 TTCCAAGCTGACATGATAATTCTTCGATCATACGGATTAGTCTTCAATTTCTTGATTACA 1312827 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046 | || |||||| |||| ||||| || | || ||| || | ||| |||||| || Sbjct 1312828 TCTTGTAATTGATCAAATCCTTGGCCGGTGTAGTCGGTATCACAATCTTGATATTCAGCA 1312887 Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA-TA 102105 || ||||| ||||| || || ||||| || ||||| | ||| |||||| | | | | Sbjct 1312888 CCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGATGAGTT 1312947 Query 102106 AAAACCAAGTTTATCTAAAAATGATC-TAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164 || ||||| || || |||||| || ||| ||||| | ||||| || | || || Sbjct 1312948 AATCCCAAG-TTGTCCAAAAATTCTCGCAGA-CCATTACCTTCCCATATCTTGACCCCTT 1313005 Query 102165 CT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAAC 102222 | || | | |||| || || |||||||| | ||||||||| ||||| | || Sbjct 1313006 TTTCACTCA-AAATCTTGGC-ATCGGTAGATCCAGCTACAAACCACAAAAGTTCGTGAAT 1313063 Query 102223 AACACCTCTCCAAAATACTCTCTTAGTAGTTA--AAAGTGGAA--ATTCATTT 102271 | ||| | |||| |||| |||||||| | |||| |||| | |||||| Sbjct 1313064 TATGCCTTTGGAAAACACTCGTTTAGTAGTGAGTAAAG-GGAATGAATCATTT 1313115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251164778008