Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 6e-27
seq2 125 1e-23
>seq1
Length=2936865
Score = 136 bits (150), Expect = 6e-27
Identities = 282/413 (68%), Gaps = 10/413 (2%)
Strand=Plus/Plus
Query 205559 TTACATGAAATTGTACAAAACA-ATGACAAGGTGGTATAACCATATTTTCAACATCTATA 205617
|||| | |||||| |||||| | |||||| || |||| |||| | | ||| |
Sbjct 1312706 TTACGTAAAATTG-ACAAAATACATGACATGGAGGTAATGCCATCAATGGGAAATCAGGA 1312764
Query 205618 GGATTCCAGGCTGTTAATATTATATTTCTAGATTCA---GGtttattttttattttattt 205674
|||||||| |||| | || ||| |||| ||| || ||| | || | ||| ||
Sbjct 1312765 GGATTCCAAGCTG---ACATGATAATTCTTCGATCATACGGATTAGTCTTCAATTTCTTG 1312821
Query 205675 atAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATAT 205734
|| | || | |||||||||||||||||| || || | ||||| ||| ||||
Sbjct 1312822 ATTACATCTTGTAATTGATCAAATCCTTGGCCGGTGTAGTCGGTATCACAATCTTGATAT 1312881
Query 205735 TTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTA 205794
| |||||||||||| | |||||| |||||||||||||| || ||||||||||| | |
Sbjct 1312882 TCAGCACCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGA 1312941
Query 205795 TCA-TTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggat 205853
| | |||| ||| | || | | | ||| | ||||| | ||||| || | ||
Sbjct 1312942 TGAGTTAATCCCAAG-TTGTCCAAAAATTCTCGCAGACCATTACCTTCCCATATCTTGAC 1313000
Query 205854 tcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCTTC 205913
||||| | | | ||| || | || || ||||||| || |||||| || | ||| |
Sbjct 1313001 CCCTTTTTCACTCAAAATCTTGGCATCGGTAGATCCAGCTACAAACCACAAAAGTTCGTG 1313060
Query 205914 AACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAATGAATCAT 205966
|| || ||| | |||||| | ||| || || | ||| || ||||||||||
Sbjct 1313061 AATTATGCCTTTGGAAAACACTCGTTTAGTAGTGAGTAAAGGGAATGAATCAT 1313113
>seq2
Length=2433673
Score = 125 bits (138), Expect = 1e-23
Identities = 170/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || | || || |||| || || ||||| ||| | || ||||| |
Sbjct 20988 AATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACTATCACTTTGGAAGTTGAATCCTC 21047
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| ||| | || || || ||||| ||||| ||||| ||||| || ||
Sbjct 21048 CGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAGGGTATTCCACCAGACCA 21107
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||||| | || ||||| || ||||||||||| || || |||| ||| || || ||
Sbjct 21108 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCCGACTACAA 21167
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774
|| ||||||||||| |||||||| ||||| || | || |||||||| ||| ||
Sbjct 21168 CATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTGGTAAGAA 21224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455924454400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |