Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1 136 6e-27 seq2 125 1e-23 >seq1 Length=2936865 Score = 136 bits (150), Expect = 6e-27 Identities = 282/413 (68%), Gaps = 10/413 (2%) Strand=Plus/Plus Query 205559 TTACATGAAATTGTACAAAACA-ATGACAAGGTGGTATAACCATATTTTCAACATCTATA 205617 |||| | |||||| |||||| | |||||| || |||| |||| | | ||| | Sbjct 1312706 TTACGTAAAATTG-ACAAAATACATGACATGGAGGTAATGCCATCAATGGGAAATCAGGA 1312764 Query 205618 GGATTCCAGGCTGTTAATATTATATTTCTAGATTCA---GGtttattttttattttattt 205674 |||||||| |||| | || ||| |||| ||| || ||| | || | ||| || Sbjct 1312765 GGATTCCAAGCTG---ACATGATAATTCTTCGATCATACGGATTAGTCTTCAATTTCTTG 1312821 Query 205675 atAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATAT 205734 || | || | |||||||||||||||||| || || | ||||| ||| |||| Sbjct 1312822 ATTACATCTTGTAATTGATCAAATCCTTGGCCGGTGTAGTCGGTATCACAATCTTGATAT 1312881 Query 205735 TTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTA 205794 | |||||||||||| | |||||| |||||||||||||| || ||||||||||| | | Sbjct 1312882 TCAGCACCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGA 1312941 Query 205795 TCA-TTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggat 205853 | | |||| ||| | || | | | ||| | ||||| | ||||| || | || Sbjct 1312942 TGAGTTAATCCCAAG-TTGTCCAAAAATTCTCGCAGACCATTACCTTCCCATATCTTGAC 1313000 Query 205854 tcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCTTC 205913 ||||| | | | ||| || | || || ||||||| || |||||| || | ||| | Sbjct 1313001 CCCTTTTTCACTCAAAATCTTGGCATCGGTAGATCCAGCTACAAACCACAAAAGTTCGTG 1313060 Query 205914 AACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAATGAATCAT 205966 || || ||| | |||||| | ||| || || | ||| || |||||||||| Sbjct 1313061 AATTATGCCTTTGGAAAACACTCGTTTAGTAGTGAGTAAAGGGAATGAATCAT 1313113 >seq2 Length=2433673 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | || || |||| || || ||||| ||| | || ||||| | Sbjct 20988 AATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACTATCACTTTGGAAGTTGAATCCTC 21047 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || || || ||||| ||||| ||||| ||||| || || Sbjct 21048 CGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAGGGTATTCCACCAGACCA 21107 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || ||||| || ||||||||||| || || |||| ||| || || || Sbjct 21108 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCCGACTACAA 21167 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 || ||||||||||| |||||||| ||||| || | || |||||||| ||| || Sbjct 21168 CATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTGGTAAGAA 21224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455924454400