Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq1 286 3e-72
>seq1
Length=2936865
Score = 286 bits (316), Expect = 3e-72
Identities = 601/888 (68%), Gaps = 21/888 (2%)
Strand=Plus/Minus
Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002
||||||||| ||| ||||||||||||||||||||| || || || | || ||||| ||
Sbjct 2540278 TTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAAATGTT 2540219
Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAA 16059
|||||||||||| || ||||| | ||| | ||| ||| | ||||| | |
Sbjct 2540218 TTCCATAAAATCGAATGGATTAGTG--ACATT-GTAAACTTTTTTATTACCCAAAGCAAC 2540162
Query 16060 CAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTAT 16119
|||||||||||| || |||||||| | ||| || |||||| | ||| ||||| || |
Sbjct 2540161 CAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCCAA 2540102
Query 16120 TAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGAT 16179
||| |||| || | || || || || || | |||||| || | ||| |||||| | ||
Sbjct 2540101 TAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAAT 2540042
Query 16180 TATATCTCTTACTACACTATTTAACGGAG--GGTTTAA----TAAGTGTTTAAACATTAT 16233
|| |||| | || | ||| ||| ||| || ||| || ||| | ||
Sbjct 2540041 AAT---TCTTTCAACGATCTTT---GGATCTGGTCTATGTTGTAAATGGGCAAATAATAA 2539988
Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293
||| ||||| ||| || || |||||||| | || ||||| ||||| || || || |
Sbjct 2539987 ACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAA 2539928
Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353
|||||||| | |||| ||| || | ||| || |||| |||||||||||| || ||
Sbjct 2539927 TCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAA 2539868
Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc 16413
||||||||||| || || || |||||||||| ||| | || | | | ||
Sbjct 2539867 GATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGAATCTTG 2539808
Query 16414 tatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473
|||||| | | ||||||| || || | ||||| ||| | || || |||||
Sbjct 2539807 GATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCATT 2539748
Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533
||||| | | |||||| ||| |||||||| || || | ||| || |
Sbjct 2539747 GAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGAGTAAGT 2539688
Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593
|||||| ||||| || ||||| || || || || || || || ||||||| | ||
Sbjct 2539687 TTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAAT 2539628
Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653
||| ||||||| |||| |||| | ||||| || ||||| || |||||| || ||
Sbjct 2539627 TTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGATGCGGC 2539568
Query 16654 AAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGTTT--TAACCA 16710
||| || || | || | ||||| ||| ||||| | || ||| | |||
Sbjct 2539567 AAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTCTCTCCA 2539508
Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTT 16770
||| || |||||| |||||||| ||||| | ||||| || ||||| |||| ||
Sbjct 2539507 ATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGCTTT 2539448
Query 16771 TTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA 16818
|| ||||||| ||| || || | ||| || ||||||| |||||
Sbjct 2539447 CTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATA 2539400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511953748800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |