Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1 286 3e-72 >seq1 Length=2936865 Score = 286 bits (316), Expect = 3e-72 Identities = 601/888 (68%), Gaps = 21/888 (2%) Strand=Plus/Minus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 ||||||||| ||| ||||||||||||||||||||| || || || | || ||||| || Sbjct 2540278 TTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAAATGTT 2540219 Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAA 16059 |||||||||||| || ||||| | ||| | ||| ||| | ||||| | | Sbjct 2540218 TTCCATAAAATCGAATGGATTAGTG--ACATT-GTAAACTTTTTTATTACCCAAAGCAAC 2540162 Query 16060 CAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTAT 16119 |||||||||||| || |||||||| | ||| || |||||| | ||| ||||| || | Sbjct 2540161 CAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCCAA 2540102 Query 16120 TAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGAT 16179 ||| |||| || | || || || || || | |||||| || | ||| |||||| | || Sbjct 2540101 TAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAAT 2540042 Query 16180 TATATCTCTTACTACACTATTTAACGGAG--GGTTTAA----TAAGTGTTTAAACATTAT 16233 || |||| | || | ||| ||| ||| || ||| || ||| | || Sbjct 2540041 AAT---TCTTTCAACGATCTTT---GGATCTGGTCTATGTTGTAAATGGGCAAATAATAA 2539988 Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293 ||| ||||| ||| || || |||||||| | || ||||| ||||| || || || | Sbjct 2539987 ACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAA 2539928 Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353 |||||||| | |||| ||| || | ||| || |||| |||||||||||| || || Sbjct 2539927 TCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAA 2539868 Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc 16413 ||||||||||| || || || |||||||||| ||| | || | | | || Sbjct 2539867 GATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGAATCTTG 2539808 Query 16414 tatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473 |||||| | | ||||||| || || | ||||| ||| | || || ||||| Sbjct 2539807 GATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCATT 2539748 Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533 ||||| | | |||||| ||| |||||||| || || | ||| || | Sbjct 2539747 GAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGAGTAAGT 2539688 Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593 |||||| ||||| || ||||| || || || || || || || ||||||| | || Sbjct 2539687 TTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAAT 2539628 Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653 ||| ||||||| |||| |||| | ||||| || ||||| || |||||| || || Sbjct 2539627 TTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGATGCGGC 2539568 Query 16654 AAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGTTT--TAACCA 16710 ||| || || | || | ||||| ||| ||||| | || ||| | ||| Sbjct 2539567 AAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTCTCTCCA 2539508 Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTT 16770 ||| || |||||| |||||||| ||||| | ||||| || ||||| |||| || Sbjct 2539507 ATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGCTTT 2539448 Query 16771 TTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA 16818 || ||||||| ||| || || | ||| || ||||||| ||||| Sbjct 2539447 CTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATA 2539400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511953748800