Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 9e-28
>seq1
Length=2936865
Score = 138 bits (152), Expect = 9e-28
Identities = 293/430 (68%), Gaps = 7/430 (2%)
Strand=Plus/Minus
Query 20017 CAATCTCGATATAACTTGAGAAATGAAT--TTCCCTT-ATTAACTACGAAACGGGTATTT 20073
|||| |||| | | ||| |||||| | ||||||| | | ||||| ||||| || |||
Sbjct 1313135 CAATTACGATTTGATTTGTCAAATGATTCATTCCCTTTACTCACTACTAAACGAGTGTTT 1313076
Query 20074 TGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAG 20133
| |||||| | || | || | || |||||| | ||||| || || | | ||
Sbjct 1313075 TCCAAAGGCATAATTCACGAACTTTTGTGGTTTGTAGCTGGATCTACCGATGCCAA-GAT 1313017
Query 20134 CTTGTA-GAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGC-AATTTTTACACA 20191
||| |||||||| || ||||| ||| | |||| ||| | ||||||| |||
Sbjct 1313016 TTTGAGTGAAAAAGGGGTCAAGATATGGGAAGGTAATGG-TCTGCGAGAATTTTTGGACA 1312958
Query 20192 GCAATGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGA 20251
| ||||| | |||| || || |||||||| || || ||||| || |||||||
Sbjct 1312957 ACTTGGGATTAACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGA 1312898
Query 20252 GACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATC 20311
|||||||||| ||||||||| || | || | || || |||||| | ||||
Sbjct 1312897 GACATTTTGGTGCTGAATATCAAGATTGTGATACCGACTACACCGGCCAAGGATTTGATC 1312838
Query 20312 AATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTAT 20371
|||||||| |||| || || | | || || || || | || |||||||||| | |
Sbjct 1312837 AATTACAAGATGTAATCAAGAAATTGAAGACTAATCCGTATGATCGAAGAATTATCATGT 1312778
Query 20372 GCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCC 20431
|| ||||| || ||| | || || ||||| || |||||||||||| | | || |
Sbjct 1312777 CAGCTTGGAATCCTCCTGATTTCCCATTGATGGCATTACCTCCATGTCATGTATTTTGTC 1312718
Query 20432 AATTTTACGT 20441
||||||||||
Sbjct 1312717 AATTTTACGT 1312708
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512
|||| || ||| | | |||||| |||| ||| |||||| ||||||| || |||||||
Sbjct 1312633 AATTATCCTGTTTATTATATCAAAGATCGTGTGACATGGGATTGGGTGTCCCATTCAATA 1312574
Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTG 20572
||||| ||||| | ||||| | |||||||||||||| |||| | | || |
Sbjct 1312573 TTGCATCCTATGCATTACTTACCAAGATGATTGCACATGTGGTAGATATGGACTGCGGAG 1312514
Query 20573 ACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAAT 20632
| || | || ||| |||| || || ||| | ||| | ||||||| || | || ||
Sbjct 1312513 AGTTTATTCATACCCTAGGTGATGCTCATGTATACTTGGATCATATTGATGCATTGAAGG 1312454
Query 20633 TACAGTTAACACGACAACCAAAACAATTCCC 20663
|| | || || ||||||||||||||
Sbjct 1312453 AGCAAATGACGAGAATTCCAAAACAATTCCC 1312423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183961079560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |