Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 138 9e-28 >seq1 Length=2936865 Score = 138 bits (152), Expect = 9e-28 Identities = 293/430 (68%), Gaps = 7/430 (2%) Strand=Plus/Minus Query 20017 CAATCTCGATATAACTTGAGAAATGAAT--TTCCCTT-ATTAACTACGAAACGGGTATTT 20073 |||| |||| | | ||| |||||| | ||||||| | | ||||| ||||| || ||| Sbjct 1313135 CAATTACGATTTGATTTGTCAAATGATTCATTCCCTTTACTCACTACTAAACGAGTGTTT 1313076 Query 20074 TGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAG 20133 | |||||| | || | || | || |||||| | ||||| || || | | || Sbjct 1313075 TCCAAAGGCATAATTCACGAACTTTTGTGGTTTGTAGCTGGATCTACCGATGCCAA-GAT 1313017 Query 20134 CTTGTA-GAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGC-AATTTTTACACA 20191 ||| |||||||| || ||||| ||| | |||| ||| | ||||||| ||| Sbjct 1313016 TTTGAGTGAAAAAGGGGTCAAGATATGGGAAGGTAATGG-TCTGCGAGAATTTTTGGACA 1312958 Query 20192 GCAATGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGA 20251 | ||||| | |||| || || |||||||| || || ||||| || ||||||| Sbjct 1312957 ACTTGGGATTAACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGA 1312898 Query 20252 GACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATC 20311 |||||||||| ||||||||| || | || | || || |||||| | |||| Sbjct 1312897 GACATTTTGGTGCTGAATATCAAGATTGTGATACCGACTACACCGGCCAAGGATTTGATC 1312838 Query 20312 AATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTAT 20371 |||||||| |||| || || | | || || || || | || |||||||||| | | Sbjct 1312837 AATTACAAGATGTAATCAAGAAATTGAAGACTAATCCGTATGATCGAAGAATTATCATGT 1312778 Query 20372 GCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCC 20431 || ||||| || ||| | || || ||||| || |||||||||||| | | || | Sbjct 1312777 CAGCTTGGAATCCTCCTGATTTCCCATTGATGGCATTACCTCCATGTCATGTATTTTGTC 1312718 Query 20432 AATTTTACGT 20441 |||||||||| Sbjct 1312717 AATTTTACGT 1312708 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 |||| || ||| | | |||||| |||| ||| |||||| ||||||| || ||||||| Sbjct 1312633 AATTATCCTGTTTATTATATCAAAGATCGTGTGACATGGGATTGGGTGTCCCATTCAATA 1312574 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTG 20572 ||||| ||||| | ||||| | |||||||||||||| |||| | | || | Sbjct 1312573 TTGCATCCTATGCATTACTTACCAAGATGATTGCACATGTGGTAGATATGGACTGCGGAG 1312514 Query 20573 ACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAAT 20632 | || | || ||| |||| || || ||| | ||| | ||||||| || | || || Sbjct 1312513 AGTTTATTCATACCCTAGGTGATGCTCATGTATACTTGGATCATATTGATGCATTGAAGG 1312454 Query 20633 TACAGTTAACACGACAACCAAAACAATTCCC 20663 || | || || |||||||||||||| Sbjct 1312453 AGCAAATGACGAGAATTCCAAAACAATTCCC 1312423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183961079560