Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 311 8e-80
>seq1
Length=2936865
Score = 311 bits (344), Expect = 8e-80
Identities = 635/929 (68%), Gaps = 21/929 (2%)
Strand=Plus/Minus
Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960
||||| || ||||||||| ||| |||||| ||||||||||| || || ||||| ||
Sbjct 2540289 ATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCC 2540230
Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACC 14019
| || || |||||||||||||| |||||||| || ||||| | ||||| | | |||
Sbjct 2540229 AAGGAAATGTTTTCCATAAAATCGAATGGATTAGT-GACATTGTAAACTTTTTTATTACC 2540171
Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079
| | | | ||||||||| |||| || |||| ||||||| ||||||| | ||||||
Sbjct 2540170 CAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATT 2540111
Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139
|||||| | || | || || | || || || ||||||||||| || |||||
Sbjct 2540110 CATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGC 2540051
Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAA--GGAGGATATTTTAGATGTTTAAAA 14197
|| | ||||| | || || | || || || || || || ||| |||
Sbjct 2540050 TTCAGTAATAATTCTTTCAACGATCT--TTGGATCTGGTCTATGTTGTAAATGGGCAAAT 2539993
Query 14198 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 14257
| |||||| ||||| ||| || | || || || | || ||| | |||||| || ||
Sbjct 2539992 AATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAA 2539933
Query 14258 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAA 14317
||||||||||||||||| |||| ||| || ||||| || || | || ||||| ||
Sbjct 2539932 GTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTG 2539873
Query 14318 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTT 14375
|| || || || ||||| ||||| || || | |||| || ||||| |||| |
Sbjct 2539872 AAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGAA 2539813
Query 14376 TGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435
| || | |||||| | | ||||| |||| || |||||||| || |||||||
Sbjct 2539812 TCTTGG--ATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAA 2539755
Query 14436 TAGCATTAAATAA-ATGT-TCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAA 14493
||||||| ||||| | || ||||| || | |||| || || || ||||| | |||
Sbjct 2539754 TAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTG--ATATAAGTTTCAATCAATAA 2539697
Query 14494 GCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGC 14553
|| |||| ||||| ||||||||||| || || || || || ||| || ||||
Sbjct 2539696 TGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGC 2539637
Query 14554 TTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATC 14613
||||| ||| || || | |||| |||| |||| || |||||||| ||||||||
Sbjct 2539636 TTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATC 2539577
Query 14614 ACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTT 14673
|| ||||| || ||||| || || |||||| | | || | || | | | |||
Sbjct 2539576 GGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTT 2539517
Query 14674 TT---TCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14730
|| ||||||| | ||| ||| | ||| | ||| ||| ||||||| || |||
Sbjct 2539516 TTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGC 2539457
Query 14731 AACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14790
||||||| || |||||| ||| ||||| | ||| || ||||| | ||| | |
Sbjct 2539456 CTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATAAC- 2539398
Query 14791 TGAAG-ATGTT-TCTTTAAGAATTGGTTC 14817
|| | |||| ||||| | || ||||||
Sbjct 2539397 -GACGTGTGTTCTCTTTCAAAAGTGGTTC 2539370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345551765440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |