Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1 311 8e-80 >seq1 Length=2936865 Score = 311 bits (344), Expect = 8e-80 Identities = 635/929 (68%), Gaps = 21/929 (2%) Strand=Plus/Minus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 ||||| || ||||||||| ||| |||||| ||||||||||| || || ||||| || Sbjct 2540289 ATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCC 2540230 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACC 14019 | || || |||||||||||||| |||||||| || ||||| | ||||| | | ||| Sbjct 2540229 AAGGAAATGTTTTCCATAAAATCGAATGGATTAGT-GACATTGTAAACTTTTTTATTACC 2540171 Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079 | | | | ||||||||| |||| || |||| ||||||| ||||||| | |||||| Sbjct 2540170 CAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATT 2540111 Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139 |||||| | || | || || | || || || ||||||||||| || ||||| Sbjct 2540110 CATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGC 2540051 Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAA--GGAGGATATTTTAGATGTTTAAAA 14197 || | ||||| | || || | || || || || || || ||| ||| Sbjct 2540050 TTCAGTAATAATTCTTTCAACGATCT--TTGGATCTGGTCTATGTTGTAAATGGGCAAAT 2539993 Query 14198 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 14257 | |||||| ||||| ||| || | || || || | || ||| | |||||| || || Sbjct 2539992 AATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAA 2539933 Query 14258 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAA 14317 ||||||||||||||||| |||| ||| || ||||| || || | || ||||| || Sbjct 2539932 GTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTG 2539873 Query 14318 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTT 14375 || || || || ||||| ||||| || || | |||| || ||||| |||| | Sbjct 2539872 AAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGAA 2539813 Query 14376 TGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435 | || | |||||| | | ||||| |||| || |||||||| || ||||||| Sbjct 2539812 TCTTGG--ATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAA 2539755 Query 14436 TAGCATTAAATAA-ATGT-TCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAA 14493 ||||||| ||||| | || ||||| || | |||| || || || ||||| | ||| Sbjct 2539754 TAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTG--ATATAAGTTTCAATCAATAA 2539697 Query 14494 GCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGC 14553 || |||| ||||| ||||||||||| || || || || || ||| || |||| Sbjct 2539696 TGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGC 2539637 Query 14554 TTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATC 14613 ||||| ||| || || | |||| |||| |||| || |||||||| |||||||| Sbjct 2539636 TTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATC 2539577 Query 14614 ACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTT 14673 || ||||| || ||||| || || |||||| | | || | || | | | ||| Sbjct 2539576 GGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTT 2539517 Query 14674 TT---TCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14730 || ||||||| | ||| ||| | ||| | ||| ||| ||||||| || ||| Sbjct 2539516 TTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGC 2539457 Query 14731 AACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14790 ||||||| || |||||| ||| ||||| | ||| || ||||| | ||| | | Sbjct 2539456 CTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATAAC- 2539398 Query 14791 TGAAG-ATGTT-TCTTTAAGAATTGGTTC 14817 || | |||| ||||| | || |||||| Sbjct 2539397 -GACGTGTGTTCTCTTTCAAAAGTGGTTC 2539370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345551765440