Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1 188 6e-43
seq4 102 7e-17
seq2 93.3 4e-14
>seq1
Length=2936865
Score = 188 bits (208), Expect = 6e-43
Identities = 419/626 (67%), Gaps = 11/626 (2%)
Strand=Plus/Plus
Query 57505 CCGATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATC 57564
|||| |||||||||||| ||||||| | ||| | | |||||||||||| || ||| |
Sbjct 2539365 CCGAAGAACCACTTTTGAAAGAGAACACACGTCGTTATGTCATGTTTCCAATCAGATACC 2539424
Query 57565 CAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAG 57624
|| || ||| | |||||||| || || || || || || ||||| | |||||| | |
Sbjct 2539425 ATGAAATCTGGCAAATGTACAAGAAAGCTGAGGCTTCATTCTGGACAGCTGAAGAAATCG 2539484
Query 57625 ACCTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTA 57681
| | ||| ||||| |||||| || | || || ||| | ||||
Sbjct 2539485 ATTTAGGTAAAGATCTTCATGATTGGAGAGAAAAATTAAACGATAATGAACGTTTCTTTA 2539544
Query 57682 TTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCG 57741
| | | ||||| || || ||||||||||||||||||||||| ||||| ||||| |
Sbjct 2539545 TCGGAAGAATCTTGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAGAACTTGGTGG 2539604
Query 57742 AAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801
||| |||||| ||||| ||| | | || || | || || |||||||| ||| |
Sbjct 2539605 AAAACTTTTCAGCTGAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTA 2539664
Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACA 57861
|| |||||| | || ||||||| || || || | || || || || | |||| |
Sbjct 2539665 TGATGGAAAACATTCACTCAGAAACTTACTCATTATTGATTGAAACTTATATCAAGG--A 2539722
Query 57862 ACGACGAGAAACGTAGAC----TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG 57917
| | |||| | ||| | ||||| || || ||||| || || || |||
Sbjct 2539723 TCCAAAAGAA--GCTGACTTCTTATTCAATGCTATTGAAACCATTCCACAAATTAAAAAG 2539780
Query 57918 AAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTA 57977
||||| || ||| | |||| |||||| || || ||| ||| |||||||| |
Sbjct 2539781 AAGGCTGATTGGGCCATCAGATGGATCCAAGATTCCGAGGCATTGTTTGCCGAGAGATTG 2539840
Query 57978 ATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGG 58037
| || ||||| || || |||||||| || || || ||||| | || || |||
Sbjct 2539841 GTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGG 2539900
Query 58038 ATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGAC 58097
|||||||| | || ||||||| || | || || |||||| || || | || |||
Sbjct 2539901 TTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGAC 2539960
Query 58098 GAGGGTCTCCATACTGATTTTGCGTG 58123
|| ||| | || ||||| ||||| ||
Sbjct 2539961 GAAGGTTTACACACTGACTTTGCATG 2539986
Score = 165 bits (182), Expect = 7e-36
Identities = 958/1519 (63%), Gaps = 56/1519 (4%)
Strand=Plus/Plus
Query 22492 GTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGA 22551
||| ||||| || ||| | ||||| ||| |||||||||| |||| || || | || ||
Sbjct 2416006 GTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACCCAAAATTTGTGATGTGGA 2416065
Query 22552 AGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACT 22611
|||||| ||||| || |||| || | |||||||||| || || || | || ||| |
Sbjct 2416066 AGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACCATGTTTGGCAAGTTTTTT 2416125
Query 22612 CTTGAG--CATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTAT 22669
|| | |||| ||| ||||| | || | ||| | ||||||||| || |||
Sbjct 2416126 TTTCAATTCATC--CCAATCCCATAATTCTGTAGGCTTTC---TGTCCCACAAGTCATAT 2416180
Query 22670 TGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATA-TCGC 22728
|| |||| || | || || |||| ||| ||||| || ||||| | | | |
Sbjct 2416181 TGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGTTTCATAAGGACCTTCTTCTTGT 2416240
Query 22729 GGCAAGT---TCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTT 22785
| ||| | | | |||| || | || ||| ||| ||||| ||||| |||| |
Sbjct 2416241 GCCAATTCAATAGAAGCT----TCAACAGCAGCGTGATAGATAGTTTCGAAAATTTGAAT 2416296
Query 22786 GTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGC 22845
||| ||||| || | | ||| | || | | | || ||| || || ||
Sbjct 2416297 GTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAAACCATGAAGGCATCAGC 2416356
Query 22846 CATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGG 22905
|| ||| || || || | | || |||| || | ||| || || | || || ||
Sbjct 2416357 CAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGATTTCTCAGCTTCAGG 2416416
Query 22906 CAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTAT 22965
| || || ||||| || || |||||||||||| | || |||| ||| || |
Sbjct 2416417 GACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAGTAACAACTTTGGTAAC 2416476
Query 22966 NNNNNNNNNNNNNTCAAAGTCGTA---AACG------CCCGATTGTACAACAAACTT-GT 23015
||||||| ||| | || || |||| |||||||| |
Sbjct 2416477 ATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTTGTTCAACAAACGAAGG 2416536
Query 23016 TGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAA 23075
| ||| | ||||| || | || || || || || |||||| | | ||| || ||||
Sbjct 2416537 TAACG-CAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGCTGAGTATTCGACAA 2416595
Query 23076 TTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGAT 23135
|||| ||| | ||| | | || || | || ||||| |||||||| || |
Sbjct 2416596 TTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTCTGGTTGGACTTGGTGT 2416655
Query 23136 TGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCG 23195
| || | |||||| || | |||| | || || || || ||| || | || | ||| |
Sbjct 2416656 TACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATGG 2416715
Query 23196 CTCGCCACATAGTCTGAGCGTGAACACGTCG-----CACGTACCTGCCTTCTTCCTCGTA 23250
||||| | ||||| | | | |||| |||| || ||| || ||
Sbjct 2416716 AGTACCACAACTTTTGAGCCTTGATGGTTTTTCTACCACG-ACCTTCC--CTT--TCATA 2416770
Query 23251 CTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCAT 23310
|||| ||||||| | |||| ||| |||| ||| |||||||| || || | || |
Sbjct 2416771 TTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCGGCCAATCCTGGAGCTTCATT 2416830
Query 23311 CGGACACATGAGACTCCACATTGAGTCATTTT---CAACGCGTCTCATAAAAAGATCCGG 23367
||| | | | ||||| | | |||||| |||| | ||||||| | ||| ||
Sbjct 2416831 TGGAGAGAACAATGTCCAC--TCAC-CATTTTGTTCAACTCTCTTCATAAACAAATCTGG 2416887
Query 23368 TATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTT 23427
||||| | || ||| | || | || | | || || || ||| ||||||| |
Sbjct 2416888 AATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGTGGTTCTTTCT 2416947
Query 23428 CAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCC 23487
| || | || || || | || ||||| || || || || | ||||| || ||
Sbjct 2416948 GATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACC 2417007
Query 23488 CGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCAT 23547
|||||||| || || || ||||| || |||||||| ||||||||| | || | | |||
Sbjct 2417008 AGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCAT 2417067
Query 23548 CGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAAC 23607
|| | | ||| || || | ||| | || || | | | ||| | | ||||
Sbjct 2417068 AGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGAAT 2417127
Query 23608 GTTGTGAACGTGGAAACCTATGCCTCC-GCCCGATTTCGATATCATCGCGCATTGTTTCA 23666
|||||||| ||| ||||| || || || || | ||| || || | || || ||| |
Sbjct 2417128 GTTGTGAATGTGCAAACCAATACCACCAGCACTCTTT-GAAATTAAAGCACAAGTTTTTA 2417186
Query 23667 GAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACA 23726
||||| || || || || || || ||||| | || ||||||||||| || ||||
Sbjct 2417187 AGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACA 2417246
Query 23727 TTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCAT 23786
|||| | ||| || ||| | || |||| || | || |||||||||| |
Sbjct 2417247 TTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCATGAGTAAAGTATCTTT 2417306
Query 23787 TCGACATTAGATTGTACGTGTCGATGGC----GGCATCAATGTCCTCTCCGTGTATACCG 23842
|||||| | || || || || ||| | || || || || ||| |||||||||
Sbjct 2417307 GCGACATCAAGTTATAAGTTTCAATGACTCTTGGGAT--ATCTC--TTCCATGTATACCG 2417362
Query 23843 ATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC--CGTGACGCCGTTAATTTTGA 23900
|| || || | ||| |||| | || ||||| || | | | | || || || |
Sbjct 2417363 ATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTA--CCATTGATACGTA 2417420
Query 23901 ACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960
||| |||||| | || | ||||| || |||||||||| || || || ||||| || |
Sbjct 2417421 ACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAATCACGGTCAT 2417480
Query 23961 GCACTATGGCCGAATTCAA 23979
|| || || || |||||
Sbjct 2417481 AGACAATTGCTGAGTTCAA 2417499
>seq4
Length=1591921
Score = 102 bits (112), Expect = 7e-17
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 22436 TCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAA 22495
||||||| |||| |||||||||||| |||||||| || | || || ||| |||
Sbjct 908185 TCTTTGATGAGATACTTGTTCACCACTTGGAACTCGCCAGATATTACTCGACGTGTGTAT 908126
Query 22496 ATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCG 22555
| ||||| || ||||||| ||| |||||||| ||||| ||||||| || |||||
Sbjct 908125 AAATTGGACGTATACGGTTCAAAACATTCATTGAATCCCAAAATCTGAGATGTTGAAGCA 908066
Query 22556 GTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCA 22589
|| ||||| || || | || || ||||||||||
Sbjct 908065 GTAGGCATGGGTGCTATCAAGAGTGAGTTTCTCA 908032
>seq2
Length=2433673
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| || ||| | || || || || ||||| | || |||||| |
Sbjct 20986 AAAATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACTATCACTTTGGAAGTTGAATCC 21045
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| | | || | ||||| | || ||||| || || | || || |||
Sbjct 21046 TCCGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAGGGTATTCCACCAGAC 21105
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| ||||| || |||||| || || | ||| ||
Sbjct 21106 CAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCCGACTAC 21165
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||||||||| ||| | || |||| | ||| |||| || |||
Sbjct 21166 AACATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 21216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766355423360
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