Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 185 2e-41
>seq1
Length=2936865
Score = 185 bits (204), Expect = 2e-41
Identities = 310/442 (70%), Gaps = 11/442 (2%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| || ||||| |||||||| ||||| || |||||| |||| ||||| |||||||||
Sbjct 2539841 GTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGG 2539900
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| || ||| | |||| || | || | |||||| || || |||| | | |||
Sbjct 2539901 TTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGAC 2539960
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | || ||||||||||| | | || | ||| ||| |||
Sbjct 2539961 GAAGGTTTACACACTGACTTTGCATGTTTATTATTTGCCCA---TTTACAACATAGACCA 2540017
Query 102098 TCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154
| |||| || |||||| || | |||||||| || ||||||| |||||||
Sbjct 2540018 G--ATCCAAAG-ATCGTTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTC 2540074
Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214
| || | | | | || |||| ||| |||| ||||| || || || ||| | || ||
Sbjct 2540075 TTTACTGATGCTTTACCAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATAT 2540134
Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTATAATGT 102273
|||||||||| || |||| | ||||||||| |||| | || ||||| || |||||
Sbjct 2540135 GTTGAATTTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTT-TACAATGT 2540193
Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333
|| || || ||| || ||||| || |||||| | | ||||||||| || |||||
Sbjct 2540194 CACTAATCCATTCGATTTTATGGAAAACATTTCCTTGGCTGGTAAGACCAATTTCTTTGA 2540253
Query 102334 AAAGAGAGTCGCCGAGTATCAA 102355
||||||||| | || ||||||
Sbjct 2540254 AAAGAGAGTTTCTGATTATCAA 2540275
Score = 105 bits (116), Expect = 1e-17
Identities = 200/289 (69%), Gaps = 4/289 (1%)
Strand=Plus/Minus
Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392
|| ||| | | |||||| ||| ||||||||||||| || ||| || |
Sbjct 1312994 ATATGGGAAGGTAATGGTCTGCGAGAATTTTTGGACAACTTGGGATTAACTCATCGTCGT 1312935
Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452
|| || ||||||||||| || || || ||||||||| | |||||||||||||||||| |
Sbjct 1312934 GAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATCAA 1312875
Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACC 35512
||| | |||| || || || | || |||||||||| || || | ||||
Sbjct 1312874 GATTGTGATACCGACTACACCGGCCAAGGATTTGATCAATTACAAGATGTAATCAAGAAA 1312815
Query 35513 CTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCT 35571
||| ||| ||||| ||||| |||| || || ||| | || ||||||||| ||| |
Sbjct 1312814 TTGA-AGACTAATCCGTATGATCGAAGAATTATCATGTCAGCTTGGAATCCTCCTGAT-T 1312757
Query 35572 TCACCTT-ATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
|| | || ||||| | |||||||| || | | ||||||||| ||
Sbjct 1312756 TCCCATTGATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTACGT 1312708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583898567640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |