Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 185 2e-41 >seq1 Length=2936865 Score = 185 bits (204), Expect = 2e-41 Identities = 310/442 (70%), Gaps = 11/442 (2%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| || ||||| |||||||| ||||| || |||||| |||| ||||| ||||||||| Sbjct 2539841 GTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGG 2539900 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| || ||| | |||| || | || | |||||| || || |||| | | ||| Sbjct 2539901 TTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGAC 2539960 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | || ||||||||||| | | || | ||| ||| ||| Sbjct 2539961 GAAGGTTTACACACTGACTTTGCATGTTTATTATTTGCCCA---TTTACAACATAGACCA 2540017 Query 102098 TCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 | |||| || |||||| || | |||||||| || ||||||| ||||||| Sbjct 2540018 G--ATCCAAAG-ATCGTTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTC 2540074 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 | || | | | | || |||| ||| |||| ||||| || || || ||| | || || Sbjct 2540075 TTTACTGATGCTTTACCAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATAT 2540134 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTATAATGT 102273 |||||||||| || |||| | ||||||||| |||| | || ||||| || ||||| Sbjct 2540135 GTTGAATTTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTT-TACAATGT 2540193 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 || || || ||| || ||||| || |||||| | | ||||||||| || ||||| Sbjct 2540194 CACTAATCCATTCGATTTTATGGAAAACATTTCCTTGGCTGGTAAGACCAATTTCTTTGA 2540253 Query 102334 AAAGAGAGTCGCCGAGTATCAA 102355 ||||||||| | || |||||| Sbjct 2540254 AAAGAGAGTTTCTGATTATCAA 2540275 Score = 105 bits (116), Expect = 1e-17 Identities = 200/289 (69%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392 || ||| | | |||||| ||| ||||||||||||| || ||| || | Sbjct 1312994 ATATGGGAAGGTAATGGTCTGCGAGAATTTTTGGACAACTTGGGATTAACTCATCGTCGT 1312935 Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452 || || ||||||||||| || || || ||||||||| | |||||||||||||||||| | Sbjct 1312934 GAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATCAA 1312875 Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACC 35512 ||| | |||| || || || | || |||||||||| || || | |||| Sbjct 1312874 GATTGTGATACCGACTACACCGGCCAAGGATTTGATCAATTACAAGATGTAATCAAGAAA 1312815 Query 35513 CTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCT 35571 ||| ||| ||||| ||||| |||| || || ||| | || ||||||||| ||| | Sbjct 1312814 TTGA-AGACTAATCCGTATGATCGAAGAATTATCATGTCAGCTTGGAATCCTCCTGAT-T 1312757 Query 35572 TCACCTT-ATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 || | || ||||| | |||||||| || | | ||||||||| || Sbjct 1312756 TCCCATTGATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTACGT 1312708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583898567640