Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1 331 1e-85
seq4 113 6e-20
>seq1
Length=2936865
Score = 331 bits (366), Expect = 1e-85
Identities = 1431/2245 (64%), Gaps = 67/2245 (3%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||| | ||| || |||| || || | | ||||||||| || || ||||
Sbjct 2415629 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCAGTCTTTAAT 2415688
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| ||||||| ||||| |||||||| || | ||| | || || |||
Sbjct 2415689 CCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCTTGATA 2415748
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
||||| || | ||||| |||||| ||||||||| |||| || | ||||| | ||
Sbjct 2415749 TGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATATCGATA 2415808
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285
|| |||||| | |||||||| | || || || | | ||||| || || || |
Sbjct 2415809 ATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGGGGATA 2415868
Query 62286 TTTGT---ATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342
|||| | || ||||| ||| | | ||||| ||| |||| || |||| |||
Sbjct 2415869 TTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCATCGTTC 2415928
Query 62343 CATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401
|| ||| | || ||| | | | | | || ||||| | ||||||||| ||
Sbjct 2415929 CA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAATTCACC 2415987
Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461
|| ||| ||||| | | ||| || || || || ||||| | | ||||| || ||
Sbjct 2415988 AGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACC 2416047
Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521
||||||||| | || || || || ||||| || |||||||| ||| ||||| | |||
Sbjct 2416048 CAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACC 2416107
Query 62522 GTATGTTCTG--ATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG------- 62572
||||| | | ||| | ||| | | ||||||| ||| | || | ||
Sbjct 2416108 --ATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTTCTG 2416165
Query 62573 TACAACANNNNNNNNNNNATATTGTAGAATACCGT----TACTGGCGTACGATCCTACAT 62628
| | ||| |||||||| | ||| | | |||| | ||||| |
Sbjct 2416166 TCCCACAAGTC-------ATATTGTAACAAACCTTGGGATGCTGGTG----ATCCTTGGT 2416214
Query 62629 ATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAAT 62688
| || ||||| || ||||| | | || | || | | || || | ||| ||| ||
Sbjct 2416215 AGGTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGAT 2416274
Query 62689 AAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATG-GATAA 62747
| || ||||| || || | | |||| ||| ||||| || ||| ||| |||
Sbjct 2416275 AGATAGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTC 2416334
Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807
|| || | || || || || || || ||||| || || | | || ||||| ||||||
Sbjct 2416335 TTAAA-ACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTC 2416393
Query 62808 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62867
| ||||| | |||||||| || | || |||||||| | ||||| | | | || |
Sbjct 2416394 ATGTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAG 2416453
Query 62868 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT----CAAATCGC----- 62918
|| | || |||||| ||||| | || ||| ||| | | || ||
Sbjct 2416454 TTACGAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTA 2416513
Query 62919 CCATCTATT---ACAAAC-ATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTC 62974
|||||| | |||||| | | | || |||| ||||||| ||||| || || || ||
Sbjct 2416514 CCATCTTGTTCAACAAACGAAGGT-AACGCAATCGATGCCAAGTTACAGACAGCAACTTC 2416572
Query 62975 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAA 63034
| | | | | |||| | || ||| || | || | | |||||| | |||||
Sbjct 2416573 GTCTGGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAA 2416632
Query 63035 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 63094
||| | || || ||| ||||||| ||||||||||| | |||||||| ||||||||
Sbjct 2416633 ATTCTTCTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGT 2416692
Query 63095 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 63154
||| | |||| ||| | || | | ||| | | ||||||| || | ||| ||
Sbjct 2416693 TTCGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTT--TTTCTA 2416750
Query 63155 TCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTG 63212
| | | ||| ||||| ||| ||||| | |||||||| || || | |
Sbjct 2416751 CCACGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCG 2416810
Query 63213 TCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGT 63272
|||||| ||| ||||| ||| | | ||| | |||||| || | | | ||||
Sbjct 2416811 GCCAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTC 2416870
Query 63273 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCG 63332
|||||||| | ||| |||||||| | || |||| |||||| | |||| ||| ||
Sbjct 2416871 TTCATAAACAAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCC 2416930
Query 63333 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63392
|| || |||||| | | || | ||| | | |||||| ||||| ||||| |
Sbjct 2416931 TTACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGA 2416990
Query 63393 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63452
|| | || | | | ||||| | ||||| || || ||||| | || | || |||||
Sbjct 2416991 TACAAAGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTG 2417050
Query 63453 TTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAG 63512
|| |||| | | ||| || |||||||| || || |||| || ||||| | |||||
Sbjct 2417051 TTGAAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAA 2417110
Query 63513 CCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63572
| ||| ||| |||||| || ||| | ||| || || || || | || || |||
Sbjct 2417111 GCACCAGTGGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATT 2417170
Query 63573 AATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGT 63632
|| || || |||||| |||||||| || ||||| || ||| || |||| ||
Sbjct 2417171 AAAGCACAAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACC 2417230
Query 63633 AGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63692
| ||||| |||||||| | | ||| || |||||||| || ||||||| |
Sbjct 2417231 AAGAAACAAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCA 2417290
Query 63693 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT----ATATC 63748
|| ||||| || ||| || | | || || || ||||| || ||| |||||
Sbjct 2417291 TGAGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAAT----GACTCTTGGGATATC 2417346
Query 63749 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTT 63808
| | ||| || || | || || | ||| | || ||||| ||||||||| | | |||
Sbjct 2417347 TCTTCCATGTATACCGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTT 2417406
Query 63809 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--T 63866
|| || ||||| || ||| |||| |||||||| ||||||||||||||||| |
Sbjct 2417407 ACCATTGATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATT 2417466
Query 63867 GAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATA 63926
|||| || || || || | ||| | || || | | ||| || | | || |||
Sbjct 2417467 GAAA--TCACGGTCATAGACAATTGCTGAGTTCAATTCATCAGCATTCTCTTGAATGATA 2417524
Query 63927 TC-CATGGTAATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 63984
|| ||| | | | ||||||| || |||| || | ||| || || | ||| |
Sbjct 2417525 TCGTATGTT--TCCTTTGAAATCATGGGAGCGTGAAGATTAGTTTCTGGGTTGATATATT 2417582
Query 63985 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 64044
| | ||||| | || | | | | | ||| | |||| || || | ||| ||||
Sbjct 2417583 CGTACAAATCTTTGGAAACCTGAGAATACAATTTAATGGTTTGTTTATGCAAATTGGATA 2417642
Query 64045 TGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTA 64104
|| || || || || | | ||||| || || ||| || || ||| || ||
Sbjct 2417643 CCGCGATCCTTGCTGCCAAGACAGCATAGTCTGGGTGTATGGTGGTCATAGTAGCAGCAG 2417702
Query 64105 TTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAA 64164
| || || |||| | | ||||| || | ||||| || || | |||| || ||| |
Sbjct 2417703 TCTCAGCAGCCAAATTATCCAACTCAATGGTTGTGACACCTTGGTATACACCAGCAATGA 2417762
Query 64165 CCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTC 64224
| || || || || || || | ||||| | || ||| |||||||| ||| ||
Sbjct 2417763 CTTTTTGAGTAATAGCAACTGGTTCAACATGATTTGAGTCTAAACCATAGCATAATCTTT 2417822
Query 64225 TAATACGAGACGTGATTTTATCAAA 64249
|| | || |||||||| |||||
Sbjct 2417823 GAACTCTAGCAGTGATTTTGTCAAA 2417847
Score = 315 bits (348), Expect = 9e-81
Identities = 615/899 (68%), Gaps = 11/899 (1%)
Strand=Plus/Minus
Query 33270 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 33329
||||| | |||||| || |||||| || ||| || | ||||| || ||||| ||
Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239
Query 33330 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAttttt 33389
|| || |||| || || |||||||| ||||| || ||||| || |||||||||| ||||
Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179
Query 33390 ttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATT 33449
||| ||||| || | |||||||| || || ||||| | |||| ||| | |
Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119
Query 33450 TCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATG 33509
| ||||||||| || | | ||||||| | ||| |||||| ||||||| ||||||
Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059
Query 33510 GATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGT 33569
|| || | || ||||| | |||| | | | | ||| |||| ||||||
Sbjct 2540058 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGG 2539999
Query 33570 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTA 33629
||| | |||||||| || || ||| | ||| ||||| | || ||||||||||||
Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939
Query 33630 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33689
|| || || | ||| ||||| | || | || || | ||| || || || || |||||
Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879
Query 33690 CCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGC 33748
|| || ||||| ||||| || ||||| || |||| | |||||| || | | | |
Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819
Query 33749 GCTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805
| | || || ||||| || || |||||||| ||||||||||| | || || ||
Sbjct 2539818 TCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGT 2539760
Query 33806 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33865
||| || ||||| || | ||| ||| || ||| || | |||||| || |||||
Sbjct 2539759 TTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAA 2539700
Query 33866 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33925
| || |||| || ||||||||||| || || || |||||||||||| || |
Sbjct 2539699 TAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTT 2539640
Query 33926 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33985
||| || | ||| || ||||| | |||| ||| | || || ||||| || || ||
Sbjct 2539639 AGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACC 2539580
Query 33986 ATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA-ATATTTTTCGTCTGGTGTTA 34044
||| || ||||| || ||||| | | ||||| | | || | | || |||
Sbjct 2539579 ATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGT-TTA 2539521
Query 34045 GTTTAT---TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 34101
||| | ||||||||| | ||||||| || ||| | |||||| ||||||| ||||
Sbjct 2539520 ATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATG 2539461
Query 34102 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 34160
| ||||| || || || ||||| | |||||| ||||| ||| |||||| || || |||
Sbjct 2539460 AAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 2539402
>seq4
Length=1591921
Score = 113 bits (124), Expect = 6e-20
Identities = 240/355 (68%), Gaps = 14/355 (4%)
Strand=Plus/Minus
Query 62157 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62216
||||| |||| |||||||| ||| ||| |||||||| |||||| |||||||||
Sbjct 908394 TCTGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCCCTATCTGCAGCC 908336
Query 62217 ATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62276
|| | ||| || ||| || || ||||| | ||| |||| | | || ||||||
Sbjct 908335 ATATCTATAATATCCTTCTGCTTAAGCTCCCACACCGTTCTATATAATTCTTTGATATCT 908276
Query 62277 TCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331
| || | | | ||| || |||| || || || || ||||| |||||| | |
Sbjct 908275 TTGGGTATCACCGATATGTCTT--GAATCGAGCCGCCGTCCTGAATAATTCTATTCCTCA 908218
Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA---CTCTAAGGAGATGCGGGTTAACTA 62388
|| | |||||||| | | | | ||| || | | ||||| | ||| || |
Sbjct 908217 TCGCCGAATTCCATA---TACCCAAATCTGAAAGGTCTTTGATGAGATACTTGTTCACCA 908161
Query 62389 CTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCG 62448
||||||| || ||||| | ||||| || ||||| | ||| ||||||||||| |
Sbjct 908160 CTTGGAACTCGCCAGATATTACTCGACGTGTGTATAAATTGGACGTATACGGTTCAAAAC 908101
Query 62449 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62503
| ||||| ||||||||| |||| ||||| ||||| ||||| ||||| | |||
Sbjct 908100 ATTCATTGAATCCCAAAATCTGAGATGTTGAAGCAGTAGGCATGGGTGCTATCAA 908046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817537018240
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