Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1 331 1e-85 seq4 113 6e-20 >seq1 Length=2936865 Score = 331 bits (366), Expect = 1e-85 Identities = 1431/2245 (64%), Gaps = 67/2245 (3%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||||||||| | ||| || |||| || || | | ||||||||| || || |||| Sbjct 2415629 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCAGTCTTTAAT 2415688 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || ||||||| ||||| |||||||| || | ||| | || || ||| Sbjct 2415689 CCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCTTGATA 2415748 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 ||||| || | ||||| |||||| ||||||||| |||| || | ||||| | || Sbjct 2415749 TGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATATCGATA 2415808 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || |||||| | |||||||| | || || || | | ||||| || || || | Sbjct 2415809 ATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGGGGATA 2415868 Query 62286 TTTGT---ATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 |||| | || ||||| ||| | | ||||| ||| |||| || |||| ||| Sbjct 2415869 TTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCATCGTTC 2415928 Query 62343 CATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401 || ||| | || ||| | | | | | || ||||| | ||||||||| || Sbjct 2415929 CA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAATTCACC 2415987 Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461 || ||| ||||| | | ||| || || || || ||||| | | ||||| || || Sbjct 2415988 AGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACC 2416047 Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521 ||||||||| | || || || || ||||| || |||||||| ||| ||||| | ||| Sbjct 2416048 CAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACC 2416107 Query 62522 GTATGTTCTG--ATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG------- 62572 ||||| | | ||| | ||| | | ||||||| ||| | || | || Sbjct 2416108 --ATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTTCTG 2416165 Query 62573 TACAACANNNNNNNNNNNATATTGTAGAATACCGT----TACTGGCGTACGATCCTACAT 62628 | | ||| |||||||| | ||| | | |||| | ||||| | Sbjct 2416166 TCCCACAAGTC-------ATATTGTAACAAACCTTGGGATGCTGGTG----ATCCTTGGT 2416214 Query 62629 ATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAAT 62688 | || ||||| || ||||| | | || | || | | || || | ||| ||| || Sbjct 2416215 AGGTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGAT 2416274 Query 62689 AAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATG-GATAA 62747 | || ||||| || || | | |||| ||| ||||| || ||| ||| ||| Sbjct 2416275 AGATAGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTC 2416334 Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807 || || | || || || || || || ||||| || || | | || ||||| |||||| Sbjct 2416335 TTAAA-ACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTC 2416393 Query 62808 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62867 | ||||| | |||||||| || | || |||||||| | ||||| | | | || | Sbjct 2416394 ATGTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAG 2416453 Query 62868 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT----CAAATCGC----- 62918 || | || |||||| ||||| | || ||| ||| | | || || Sbjct 2416454 TTACGAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTA 2416513 Query 62919 CCATCTATT---ACAAAC-ATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTC 62974 |||||| | |||||| | | | || |||| ||||||| ||||| || || || || Sbjct 2416514 CCATCTTGTTCAACAAACGAAGGT-AACGCAATCGATGCCAAGTTACAGACAGCAACTTC 2416572 Query 62975 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAA 63034 | | | | | |||| | || ||| || | || | | |||||| | ||||| Sbjct 2416573 GTCTGGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAA 2416632 Query 63035 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 63094 ||| | || || ||| ||||||| ||||||||||| | |||||||| |||||||| Sbjct 2416633 ATTCTTCTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGT 2416692 Query 63095 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 63154 ||| | |||| ||| | || | | ||| | | ||||||| || | ||| || Sbjct 2416693 TTCGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTT--TTTCTA 2416750 Query 63155 TCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTG 63212 | | | ||| ||||| ||| ||||| | |||||||| || || | | Sbjct 2416751 CCACGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCG 2416810 Query 63213 TCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGT 63272 |||||| ||| ||||| ||| | | ||| | |||||| || | | | |||| Sbjct 2416811 GCCAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTC 2416870 Query 63273 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCG 63332 |||||||| | ||| |||||||| | || |||| |||||| | |||| ||| || Sbjct 2416871 TTCATAAACAAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCC 2416930 Query 63333 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63392 || || |||||| | | || | ||| | | |||||| ||||| ||||| | Sbjct 2416931 TTACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGA 2416990 Query 63393 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63452 || | || | | | ||||| | ||||| || || ||||| | || | || ||||| Sbjct 2416991 TACAAAGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTG 2417050 Query 63453 TTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAG 63512 || |||| | | ||| || |||||||| || || |||| || ||||| | ||||| Sbjct 2417051 TTGAAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAA 2417110 Query 63513 CCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63572 | ||| ||| |||||| || ||| | ||| || || || || | || || ||| Sbjct 2417111 GCACCAGTGGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATT 2417170 Query 63573 AATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGT 63632 || || || |||||| |||||||| || ||||| || ||| || |||| || Sbjct 2417171 AAAGCACAAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACC 2417230 Query 63633 AGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63692 | ||||| |||||||| | | ||| || |||||||| || ||||||| | Sbjct 2417231 AAGAAACAAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCA 2417290 Query 63693 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT----ATATC 63748 || ||||| || ||| || | | || || || ||||| || ||| ||||| Sbjct 2417291 TGAGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAAT----GACTCTTGGGATATC 2417346 Query 63749 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTT 63808 | | ||| || || | || || | ||| | || ||||| ||||||||| | | ||| Sbjct 2417347 TCTTCCATGTATACCGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTT 2417406 Query 63809 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--T 63866 || || ||||| || ||| |||| |||||||| ||||||||||||||||| | Sbjct 2417407 ACCATTGATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATT 2417466 Query 63867 GAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATA 63926 |||| || || || || | ||| | || || | | ||| || | | || ||| Sbjct 2417467 GAAA--TCACGGTCATAGACAATTGCTGAGTTCAATTCATCAGCATTCTCTTGAATGATA 2417524 Query 63927 TC-CATGGTAATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 63984 || ||| | | | ||||||| || |||| || | ||| || || | ||| | Sbjct 2417525 TCGTATGTT--TCCTTTGAAATCATGGGAGCGTGAAGATTAGTTTCTGGGTTGATATATT 2417582 Query 63985 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 64044 | | ||||| | || | | | | | ||| | |||| || || | ||| |||| Sbjct 2417583 CGTACAAATCTTTGGAAACCTGAGAATACAATTTAATGGTTTGTTTATGCAAATTGGATA 2417642 Query 64045 TGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTA 64104 || || || || || | | ||||| || || ||| || || ||| || || Sbjct 2417643 CCGCGATCCTTGCTGCCAAGACAGCATAGTCTGGGTGTATGGTGGTCATAGTAGCAGCAG 2417702 Query 64105 TTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAA 64164 | || || |||| | | ||||| || | ||||| || || | |||| || ||| | Sbjct 2417703 TCTCAGCAGCCAAATTATCCAACTCAATGGTTGTGACACCTTGGTATACACCAGCAATGA 2417762 Query 64165 CCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTC 64224 | || || || || || || | ||||| | || ||| |||||||| ||| || Sbjct 2417763 CTTTTTGAGTAATAGCAACTGGTTCAACATGATTTGAGTCTAAACCATAGCATAATCTTT 2417822 Query 64225 TAATACGAGACGTGATTTTATCAAA 64249 || | || |||||||| ||||| Sbjct 2417823 GAACTCTAGCAGTGATTTTGTCAAA 2417847 Score = 315 bits (348), Expect = 9e-81 Identities = 615/899 (68%), Gaps = 11/899 (1%) Strand=Plus/Minus Query 33270 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 33329 ||||| | |||||| || |||||| || ||| || | ||||| || ||||| || Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239 Query 33330 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAttttt 33389 || || |||| || || |||||||| ||||| || ||||| || |||||||||| |||| Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179 Query 33390 ttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATT 33449 ||| ||||| || | |||||||| || || ||||| | |||| ||| | | Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119 Query 33450 TCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATG 33509 | ||||||||| || | | ||||||| | ||| |||||| ||||||| |||||| Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059 Query 33510 GATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGT 33569 || || | || ||||| | |||| | | | | ||| |||| |||||| Sbjct 2540058 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGG 2539999 Query 33570 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTA 33629 ||| | |||||||| || || ||| | ||| ||||| | || |||||||||||| Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939 Query 33630 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33689 || || || | ||| ||||| | || | || || | ||| || || || || ||||| Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879 Query 33690 CCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGC 33748 || || ||||| ||||| || ||||| || |||| | |||||| || | | | | Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819 Query 33749 GCTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 | | || || ||||| || || |||||||| ||||||||||| | || || || Sbjct 2539818 TCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGT 2539760 Query 33806 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33865 ||| || ||||| || | ||| ||| || ||| || | |||||| || ||||| Sbjct 2539759 TTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAA 2539700 Query 33866 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33925 | || |||| || ||||||||||| || || || |||||||||||| || | Sbjct 2539699 TAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTT 2539640 Query 33926 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33985 ||| || | ||| || ||||| | |||| ||| | || || ||||| || || || Sbjct 2539639 AGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACC 2539580 Query 33986 ATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA-ATATTTTTCGTCTGGTGTTA 34044 ||| || ||||| || ||||| | | ||||| | | || | | || ||| Sbjct 2539579 ATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGT-TTA 2539521 Query 34045 GTTTAT---TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 34101 ||| | ||||||||| | ||||||| || ||| | |||||| ||||||| |||| Sbjct 2539520 ATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATG 2539461 Query 34102 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 34160 | ||||| || || || ||||| | |||||| ||||| ||| |||||| || || ||| Sbjct 2539460 AAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 2539402 >seq4 Length=1591921 Score = 113 bits (124), Expect = 6e-20 Identities = 240/355 (68%), Gaps = 14/355 (4%) Strand=Plus/Minus Query 62157 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62216 ||||| |||| |||||||| ||| ||| |||||||| |||||| ||||||||| Sbjct 908394 TCTGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCCCTATCTGCAGCC 908336 Query 62217 ATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62276 || | ||| || ||| || || ||||| | ||| |||| | | || |||||| Sbjct 908335 ATATCTATAATATCCTTCTGCTTAAGCTCCCACACCGTTCTATATAATTCTTTGATATCT 908276 Query 62277 TCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331 | || | | | ||| || |||| || || || || ||||| |||||| | | Sbjct 908275 TTGGGTATCACCGATATGTCTT--GAATCGAGCCGCCGTCCTGAATAATTCTATTCCTCA 908218 Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA---CTCTAAGGAGATGCGGGTTAACTA 62388 || | |||||||| | | | | ||| || | | ||||| | ||| || | Sbjct 908217 TCGCCGAATTCCATA---TACCCAAATCTGAAAGGTCTTTGATGAGATACTTGTTCACCA 908161 Query 62389 CTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCG 62448 ||||||| || ||||| | ||||| || ||||| | ||| ||||||||||| | Sbjct 908160 CTTGGAACTCGCCAGATATTACTCGACGTGTGTATAAATTGGACGTATACGGTTCAAAAC 908101 Query 62449 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62503 | ||||| ||||||||| |||| ||||| ||||| ||||| ||||| | ||| Sbjct 908100 ATTCATTGAATCCCAAAATCTGAGATGTTGAAGCAGTAGGCATGGGTGCTATCAA 908046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817537018240