Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 324 2e-83 seq4 107 3e-18 >seq1 Length=2936865 Score = 324 bits (358), Expect = 2e-83 Identities = 1424/2238 (64%), Gaps = 53/2238 (2%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||||||||| | ||| || |||| || || | | ||||||||| || || |||| Sbjct 2415629 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCAGTCTTTAAT 2415688 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || ||||||| ||||| |||||||| || | ||| | || || ||| Sbjct 2415689 CCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCTTGATA 2415748 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 ||||| || | ||||| |||||| ||||||||| |||| || | ||||| | || Sbjct 2415749 TGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATATCGATA 2415808 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 || |||||| | |||||||| | || || || | | ||||| || || || | Sbjct 2415809 ATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGGGGATA 2415868 Query 65079 TTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 |||| | || ||||| ||| | || ||||| ||| |||| || |||| ||| Sbjct 2415869 TTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCATCGTTC 2415928 Query 65136 CATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 65194 || ||| | || ||| | | | | | |||||||| | ||| ||||| || Sbjct 2415929 CA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAATTCACC 2415987 Query 65195 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 65254 || ||| ||||| | | ||| || || || || ||||| | | | ||||| || || Sbjct 2415988 AGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACC 2416047 Query 65255 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 65314 ||||||||| | || || || || ||||| || |||||||| ||| ||||| | ||| Sbjct 2416048 CAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACC 2416107 Query 65315 GTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 65372 ||||| | | ||| | ||| | ||||||| ||| | || | || Sbjct 2416108 --ATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTTCTG 2416165 Query 65373 NNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTATC 65428 ||||| | ||| | | |||| | ||||| || || || Sbjct 2416166 TCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTG----ATCCTTGGTAGGTTTC 2416221 Query 65429 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 65488 || || ||||| | | || | |||| | || || | ||| ||| ||| || || Sbjct 2416222 ATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGATAGT 2416281 Query 65489 TTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG-GATAATTTAAGA 65547 |||||| || | | |||| ||| ||||| || ||| ||| ||| || || | Sbjct 2416282 TTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAA-A 2416340 Query 65548 GAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 65607 || || || || || || ||||| || || | | || ||||| |||||| | |||| Sbjct 2416341 CCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAG 2416400 Query 65608 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 65667 | | |||||||| || | || |||||||| | ||||| | | | || | || | Sbjct 2416401 ATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAG 2416460 Query 65668 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT----CAAATCGCT-----CATCTA 65718 || |||||| ||||| | || ||| ||| | | || || ||||| Sbjct 2416461 TAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTT 2416520 Query 65719 TT---ACAAAC-ATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 65774 | |||||| | | | || |||| ||||||| ||||| || || || || | | | Sbjct 2416521 GTTCAACAAACGAAGGT-AACGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGA 2416579 Query 65775 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 65834 | | |||| | || ||| || | || | | ||||| | |||||||| | Sbjct 2416580 GCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTC 2416639 Query 65835 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 65894 || || ||| ||||||| ||||||||||| | |||||||| ||||||||||| | Sbjct 2416640 TGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTT 2416699 Query 65895 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT- 65953 |||| ||| | || | | ||| | | ||||||| || | ||| || | | Sbjct 2416700 TGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTT--TTTCTACCACGAC 2416757 Query 65954 -TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATC 66012 ||| ||||| ||| | ||||| | |||||||| || || | | |||||| Sbjct 2416758 CTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCGGCCAATC 2416817 Query 66013 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 66072 | ||| ||||| ||| | | ||| | |||||| || | | | |||| ||||||| Sbjct 2416818 CTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAA 2416877 Query 66073 AGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTG 66132 | | ||| |||||||| | || ||||||||||| | |||| ||| || || || Sbjct 2416878 ACAAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGT 2416937 Query 66133 TATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGG 66192 |||||| | | || | ||| | | |||||| ||||| ||||| | || | | Sbjct 2416938 GGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAG 2416997 Query 66193 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 66252 | | | | ||||| | ||||| || || ||||| | || | || ||||| || ||| Sbjct 2416998 CAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAAAA 2417057 Query 66253 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCAC 66312 | | | ||| || ||||||||||| || ||||| || || || | ||||| ||| Sbjct 2417058 CACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAG 2417117 Query 66313 TTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 66372 | | |||||| || ||| | ||| || || || || | || || ||||| || | Sbjct 2417118 TGGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGCAC 2417177 Query 66373 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 66432 | |||||| || ||||| || || || ||| ||| || |||| || | |||| Sbjct 2417178 AAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAAC 2417237 Query 66433 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 66492 | |||||||| | ||| || |||||||| || ||||||| | || |||| Sbjct 2417238 AAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCATGAGTAA 2417297 Query 66493 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT----ATATCCCATTGA 66548 | || ||| || | | || || || |||| ||| ||| ||||| | | | Sbjct 2417298 AGTATCTTTGCGACATCAAGTTATAAGTTTCAA----TGACTCTTGGGATATCTCTTCCA 2417353 Query 66549 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 66608 || || || | || || | ||| | || ||||| ||||||||| | | || || Sbjct 2417354 TGTATACCGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTACCATTG 2417413 Query 66609 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 66666 || ||||| || ||| |||| |||||||| ||||||||||||||||| ||||| | Sbjct 2417414 ATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAA--T 2417471 Query 66667 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-CATG 66725 | || || || | ||| | ||||| | || ||| || | | || | ||| ||| Sbjct 2417472 CACGGTCATAGACAATTGCTGAGTTCAATTCATCAGCATTCTCTTGAATGATATCGTATG 2417531 Query 66726 GTAATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAA 66784 | | | ||||||| || |||| || | ||| || |||| ||| | | | || Sbjct 2417532 TT--TCCTTTGAAATCATGGGAGCGTGAAGATTAGTTTCTGGGTTGATATATTCGTACAA 2417589 Query 66785 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 66844 ||| | || | | | | | ||| | |||| ||| || | ||| ||||| || || Sbjct 2417590 ATCTTTGGAAACCTGAGAATACAATTTAATGGTTTGTTTATGCAAATTGGATACCGCGAT 2417649 Query 66845 TCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 66904 || || || | | ||||| || || ||| || || ||| || || | || || Sbjct 2417650 CCTTGCTGCCAAGACAGCATAGTCTGGGTGTATGGTGGTCATAGTAGCAGCAGTCTCAGC 2417709 Query 66905 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 |||| | | ||||| || | ||||| || || | |||| || || || || Sbjct 2417710 AGCCAAATTATCCAACTCAATGGTTGTGACACCTTGGTATACACCAGCAATGACTTTTTG 2417769 Query 66965 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 67024 || || || || || | ||||| | || ||| ||||| |||||| || || | Sbjct 2417770 AGTAATAGCAACTGGTTCAACATGATTTGAGTCTAAACCATAGCATAATCTTTGAACTCT 2417829 Query 67025 AGATGTGATTTTATCAAA 67042 || |||||||| ||||| Sbjct 2417830 AGCAGTGATTTTGTCAAA 2417847 Score = 320 bits (354), Expect = 2e-82 Identities = 616/899 (69%), Gaps = 11/899 (1%) Strand=Plus/Minus Query 35846 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 35905 ||||| | |||||| || |||||| || ||| || | ||||| || ||||| || Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239 Query 35906 TTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAttttt 35965 ||||| | || || || |||||||| |||||||||||||| | ||||| |||| |||| Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179 Query 35966 ttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATT 36025 ||| ||||| || | |||||||| || |||||||| | |||| ||| | | Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119 Query 36026 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 36085 | ||||||||| || | | ||||||| | ||| |||||| ||||||| |||||| Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059 Query 36086 GAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGT 36145 || || || || ||||| | || | | | | ||| || |||||| Sbjct 2540058 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGG 2539999 Query 36146 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 36205 ||| | |||||||| || || ||||| ||| ||||| | || ||||||||||||| Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939 Query 36206 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 36265 || || || | ||| ||||| | || | || || | ||| || || || |||||||| Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879 Query 36266 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGC 36324 ||| || || || ||||| || || || || |||| | |||||| || | | | | Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819 Query 36325 ACTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 36381 | | || || ||||| || || |||||||| ||||||||||| | || || || Sbjct 2539818 TCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGT 2539760 Query 36382 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 36441 || |||||||| || | ||| ||| || ||| || | ||| || |||||||| Sbjct 2539759 TTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAA 2539700 Query 36442 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCT 36501 | || |||| || ||||||||||| || ||||| |||||||||||| || | Sbjct 2539699 TAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTT 2539640 Query 36502 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 36561 ||| || | ||| || ||||| | |||| ||| | || || ||||| || || || Sbjct 2539639 AGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACC 2539580 Query 36562 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTTA 36620 || || ||||| || ||||| | | ||||| | ||| || | || ||| Sbjct 2539579 ATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGT-TTA 2539521 Query 36621 GTTTAT---TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 36677 ||| | ||||||||| | ||||||| || ||| | |||||| ||||||| |||| Sbjct 2539520 ATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATG 2539461 Query 36678 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 | ||||| || || || ||||| | |||||| ||||| ||| |||||||| || ||| Sbjct 2539460 AAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 2539402 >seq4 Length=1591921 Score = 107 bits (118), Expect = 3e-18 Identities = 239/355 (67%), Gaps = 14/355 (4%) Strand=Plus/Minus Query 64950 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 65009 ||||| |||| |||||||| ||| ||| |||||||| |||||| ||||||||| Sbjct 908394 TCTGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCCCTATCTGCAGCC 908336 Query 65010 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 65069 || | ||| || ||| || || ||||| | ||| |||| | | || |||||| Sbjct 908335 ATATCTATAATATCCTTCTGCTTAAGCTCCCACACCGTTCTATATAATTCTTTGATATCT 908276 Query 65070 TCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 65124 | || | | | ||| || |||| || || || || ||||| |||||| | | Sbjct 908275 TTGGGTATCACCGATATGTCTT--GAATCGAGCCGCCGTCCTGAATAATTCTATTCCTCA 908218 Query 65125 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA---CTCTAAGGAGATGCGGATTAACTA 65181 || | |||||||| | | | | ||| || | | ||||| | || || | Sbjct 908217 TCGCCGAATTCCATA---TACCCAAATCTGAAAGGTCTTTGATGAGATACTTGTTCACCA 908161 Query 65182 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAG 65241 |||| || || ||||| | ||||| || ||||| | ||| ||||||||||| | | Sbjct 908160 CTTGGAACTCGCCAGATATTACTCGACGTGTGTATAAATTGGACGTATACGGTTCAAAAC 908101 Query 65242 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 65296 | ||||| ||||||||| |||| ||||| ||||| ||||| ||||| | ||| Sbjct 908100 ATTCATTGAATCCCAAAATCTGAGATGTTGAAGCAGTAGGCATGGGTGCTATCAA 908046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172734182720