Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 102 6e-17 >seq1 Length=2936865 Score = 102 bits (112), Expect = 6e-17 Identities = 276/416 (66%), Gaps = 10/416 (2%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || || || ||||||||||| || | || ||| |||||||| | || |||||| || Sbjct 2539844 GCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGGTTG 2539903 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 |||||| | | |||||||| || | || |||||||| || ||| | ||||||||| Sbjct 2539904 AAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAA 2539963 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAA-ACAAACCGTGTC- 22927 ||| ||||| ||||||||| ||| | | ||| | | | | ||| | | ||| || Sbjct 2539964 GGTTTACACACTGACTTTGCATGTTTATTATTT-GCCCATTTACAACATAGACCAGATCC 2540022 Query 22928 --AGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCA 22985 || || || | ||| || |||| || ||||| ||||| | | ||||| Sbjct 2540023 AAAGATCGTTG---AAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTAC 2540079 Query 22986 AGAGGCACTA-AAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATAC 23044 || || || || | || | ||||||||| || | ||| | | || | Sbjct 2540080 TGATGCTTTACCAGTTA-GTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTTG 2540138 Query 23045 AGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCA 23104 | |||||||| ||| | | | | ||| ||||| || ||| | || || || | | Sbjct 2540139 AATTTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTA 2540198 Query 23105 ATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160 ||||||| ||||| ||||| |||||| | | | ||||| || || ||||||||| Sbjct 2540199 ATCCATTCGATTTTATGGAAAACATTTCCTTGGCTGGTAAGACCAATTTCTTTGAA 2540254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233565267224