Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 6e-17
>seq1
Length=2936865
Score = 102 bits (112), Expect = 6e-17
Identities = 276/416 (66%), Gaps = 10/416 (2%)
Strand=Plus/Plus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
|| || || ||||||||||| || | || ||| |||||||| | || |||||| ||
Sbjct 2539844 GCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGGTTG 2539903
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
|||||| | | |||||||| || | || |||||||| || ||| | |||||||||
Sbjct 2539904 AAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAA 2539963
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAA-ACAAACCGTGTC- 22927
||| ||||| ||||||||| ||| | | ||| | | | | ||| | | ||| ||
Sbjct 2539964 GGTTTACACACTGACTTTGCATGTTTATTATTT-GCCCATTTACAACATAGACCAGATCC 2540022
Query 22928 --AGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCA 22985
|| || || | ||| || |||| || ||||| ||||| | | |||||
Sbjct 2540023 AAAGATCGTTG---AAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTAC 2540079
Query 22986 AGAGGCACTA-AAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATAC 23044
|| || || || | || | ||||||||| || | ||| | | || |
Sbjct 2540080 TGATGCTTTACCAGTTA-GTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTTG 2540138
Query 23045 AGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCA 23104
| |||||||| ||| | | | | ||| ||||| || ||| | || || || | |
Sbjct 2540139 AATTTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTA 2540198
Query 23105 ATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160
||||||| ||||| ||||| |||||| | | | ||||| || || |||||||||
Sbjct 2540199 ATCCATTCGATTTTATGGAAAACATTTCCTTGGCTGGTAAGACCAATTTCTTTGAA 2540254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233565267224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |