Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 389 6e-103 seq4 98.7 1e-15 >seq1 Length=2936865 Score = 389 bits (430), Expect = 6e-103 Identities = 1438/2231 (64%), Gaps = 39/2231 (2%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| | ||| || |||| || || | | ||||||||| || || |||| Sbjct 2415629 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCAGTCTTTAAT 2415688 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || ||||||| || || |||||||| || | ||| | || || ||| Sbjct 2415689 CCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCTTGATA 2415748 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 ||||| || | ||||| |||||| ||||||||| |||| || | ||||| | || Sbjct 2415749 TGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATATCGATA 2415808 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || |||||| | |||||||| | || || || | | ||||| || || || | Sbjct 2415809 ATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGGGGATA 2415868 Query 78958 TTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 |||| | || ||||| ||| | || ||||| ||| |||| || | || ||| Sbjct 2415869 TTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCATCGTTC 2415928 Query 79015 CATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 || ||| | || ||| | | | | | |||||||| | ||| ||||| || Sbjct 2415929 CA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAATTCACC 2415987 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 || ||| ||||| | | ||| || || || |||||||| | ||||||| || || Sbjct 2415988 AGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACC 2416047 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193 ||||||||| | || || || |||||||| || |||||||| ||| ||||| | ||| Sbjct 2416048 CAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACC 2416107 Query 79194 GTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACA 79251 ||| | | | ||| | ||| | ||||||||||| | || | || Sbjct 2416108 --ATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTTCTG 2416165 Query 79252 TTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAA 79311 | ||| | |||||||||| | ||| | || ||||||| ||| ||||||||| Sbjct 2416166 TCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGTTTCATAA 2416225 Query 79312 GGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCG 79371 || ||||| | || || |||||| | || || | || ||| ||| || |||||| Sbjct 2416226 GGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGATAGTTTCG 2416285 Query 79372 AAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATG-GATAATTTAAGAGAAT 79430 ||||| | | || | ||| |||||| || ||| ||| ||| || || | || Sbjct 2416286 AAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAA-ACCAT 2416344 Query 79431 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAAT 79490 || || || || || ||||| || || | | || ||||| |||||| | ||||| | Sbjct 2416345 GAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGATTT 2416404 Query 79491 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTAT 79550 |||||||| || | || |||||||| | ||||| | | | || | || | || || Sbjct 2416405 CTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTAC-GAGTAA 2416463 Query 79551 TA-CTTTGACCACATCCTTTAGTTTGAGAAAAT----CAAATCGT-----CCATCTATT- 79599 | ||||| ||||| | | ||| ||| | | || ||| |||||| | Sbjct 2416464 CAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTTGTT 2416523 Query 79600 --ACAAAC-ATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 79656 |||||| | | | ||||| | ||||||| ||||| || || || || | | | | Sbjct 2416524 CAACAAACGAAGGT-AACGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGCT 2416582 Query 79657 GCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGA 79716 | |||| | |||||| || | ||| | | || || | |||||||| | || Sbjct 2416583 GAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTCTGG 2416642 Query 79717 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGA 79776 || ||| ||||||| ||||||||||| | ||||| || ||||||||||| | ||| Sbjct 2416643 TTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTGA 2416702 Query 79777 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTT--TT 79834 | ||| | || | | ||| | | ||||||| || | || || | | || Sbjct 2416703 GCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTTT--TTCTACCACGACCTT 2416760 Query 79835 CTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAG 79894 | ||||| |||| | || || | |||||||| || || ||| | ||||| | Sbjct 2416761 CCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCGGCCAATCCTG 2416820 Query 79895 GACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGA 79954 || ||| | ||| | | ||| | |||||| |||| | | |||| |||||||| | Sbjct 2416821 GAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAACA 2416880 Query 79955 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 80014 ||| |||||||| | || |||| |||||| | |||| || || || || | Sbjct 2416881 AATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGTGGT 2416940 Query 80015 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 80074 ||||| | | || | ||| | | |||||| ||||| ||||| | || | || | Sbjct 2416941 TCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCAA 2417000 Query 80075 TAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 80134 | | || |||| ||||| || || ||||| | || | || ||||| || |||| | Sbjct 2417001 AAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAAAACAC 2417060 Query 80135 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGG 80194 | ||| || ||||||||||| || ||||| || || || | ||||| ||| ||| Sbjct 2417061 GAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGG 2417120 Query 80195 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 80254 |||||| || ||| | ||| || || || || | || || ||||| || || Sbjct 2417121 AACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGCACAAG 2417180 Query 80255 GTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGC 80314 |||||| || ||||| || || || || ||| || |||| || | ||||| Sbjct 2417181 TTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAG 2417240 Query 80315 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 80374 |||||||| | ||| || |||||||| || ||||||| | || ||||| Sbjct 2417241 ATGACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCATGAGTAAAGT 2417300 Query 80375 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTC 80434 || ||| |||| | || || || ||||| || | ||||| | | ||| || | Sbjct 2417301 ATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCTCTTCCATGTATAC 2417360 Query 80435 CTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 80494 | | || || | ||| | || ||||| ||||||||| | | || ||| || | Sbjct 2417361 CGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTACCATTGATACGTA 2417420 Query 80495 ACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTC 80552 |||| || ||| |||| |||||||| ||||||||||||||||| ||||| || || || Sbjct 2417421 ACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAA--TCACGGTC 2417478 Query 80553 GTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-CATGGTGATAC 80611 || | ||| | ||||| | || ||| || | | || | ||| ||| | | | Sbjct 2417479 ATAGACAATTGCTGAGTTCAATTCATCAGCATTCTCTTGAATGATATCGTATGTT--TCC 2417536 Query 80612 -TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCC 80670 ||||||| || |||| || | ||| || || | ||| | | | ||||| | Sbjct 2417537 TTTGAAATCATGGGAGCGTGAAGATTAGTTTCTGGGTTGATATATTCGTACAAATCTTTG 2417596 Query 80671 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCG 80730 || | | | | | ||| | |||| || || | ||| ||||| || || || || Sbjct 2417597 GAAACCTGAGAATACAATTTAATGGTTTGTTTATGCAAATTGGATACCGCGATCCTTGCT 2417656 Query 80731 GCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGA 80790 || || | ||||| ||||| ||| || || ||| || || | || || |||| | Sbjct 2417657 GCCAAGACAGCATAGTCTGGGTGTATGGTGGTCATAGTAGCAGCAGTCTCAGCAGCCAAA 2417716 Query 80791 GTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATT 80850 | ||||| || | ||||| || || | |||| || || || || || || Sbjct 2417717 TTATCCAACTCAATGGTTGTGACACCTTGGTATACACCAGCAATGACTTTTTGAGTAATA 2417776 Query 80851 TTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTG 80910 || || || | ||||| | || ||| ||||| |||||| || || | || ||| Sbjct 2417777 GCAACTGGTTCAACATGATTTGAGTCTAAACCATAGCATAATCTTTGAACTCTAGCAGTG 2417836 Query 80911 ATTTTATCAAA 80921 ||||| ||||| Sbjct 2417837 ATTTTGTCAAA 2417847 Score = 320 bits (354), Expect = 2e-82 Identities = 614/898 (68%), Gaps = 9/898 (1%) Strand=Plus/Minus Query 49648 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 49707 ||||| | |||||| || |||||| || ||| || | ||||| || ||||| || Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239 Query 49708 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 49767 || || |||| || || |||||||| ||||| || ||||| || ||||| |||| |||| Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179 Query 49768 ttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATT 49827 ||| ||||| || | |||||||| || |||||||| | |||| ||| | | Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119 Query 49828 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATG 49887 | ||||||||| || | | ||||||| | ||| |||||| ||||||| |||||| Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059 Query 49888 GATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGT 49947 || || || || ||||| | |||| | | | | ||| ||| |||||| Sbjct 2540058 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGG 2539999 Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 ||| | |||||||| || || ||| | ||| ||||| | || ||||| ||||||| Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || || || | ||| ||||| | || | || || | ||| || || || |||||||| Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTGGC 50126 ||| || ||||| ||||| || || || || ||||| | |||||| || | | || | Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819 Query 50127 GCTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 | | || || ||||| || || |||||||| ||||||||||| | || || || Sbjct 2539818 TCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGT 2539760 Query 50184 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 50243 ||| || ||||| || | ||| ||| || ||| || | |||||| || ||||| Sbjct 2539759 TTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAA 2539700 Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 | || |||| || ||||||||||| || || || |||||||||||| || | Sbjct 2539699 TAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTT 2539640 Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363 ||| || | ||| || ||||| | |||| ||| | || || ||||| || || || Sbjct 2539639 AGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACC 2539580 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG 50423 || || ||||| || ||||| | | ||||| ||| || ||| Sbjct 2539579 ATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAA 2539520 Query 50424 TTTAT---TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 ||| | ||||||||| | ||||||| || ||| | |||||| ||||||| ||||| Sbjct 2539519 TTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGA 2539460 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538 ||||| || || || ||||| | |||||| ||||| ||| |||||| || || ||| Sbjct 2539459 AGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 2539402 >seq4 Length=1591921 Score = 98.7 bits (108), Expect = 1e-15 Identities = 237/355 (67%), Gaps = 14/355 (4%) Strand=Plus/Minus Query 78829 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 78888 ||||| |||| |||||||| ||| ||| |||||||| |||||| ||||||||| Sbjct 908394 TCTGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCCCTATCTGCAGCC 908336 Query 78889 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 78948 || | ||| || ||| || || ||||| | ||| |||| | | || |||||| Sbjct 908335 ATATCTATAATATCCTTCTGCTTAAGCTCCCACACCGTTCTATATAATTCTTTGATATCT 908276 Query 78949 TCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003 | || | | | ||| | ||||| || || || || ||||| |||||| | | Sbjct 908275 TTGGGTATCACCGATATGTCT--TGAATCGAGCCGCCGTCCTGAATAATTCTATTCCTCA 908218 Query 79004 TCTCTTCATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGATTAACTA 79060 || | |||||||| | | | || | | || | | ||||| | || || | Sbjct 908217 TCGCCGAATTCCATA---TACCCAAATCTGAAAGGTCTTTGATGAGATACTTGTTCACCA 908161 Query 79061 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCG 79120 |||| || || ||||| | ||||| || ||||| | ||| ||||| ||||| | Sbjct 908160 CTTGGAACTCGCCAGATATTACTCGACGTGTGTATAAATTGGACGTATACGGTTCAAAAC 908101 Query 79121 ATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAA 79175 ||||||| ||||||||| |||| ||||| || || ||||| ||||| | ||| Sbjct 908100 ATTCATTGAATCCCAAAATCTGAGATGTTGAAGCAGTAGGCATGGGTGCTATCAA 908046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268728173120