Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1 389 6e-103
seq4 98.7 1e-15
>seq1
Length=2936865
Score = 389 bits (430), Expect = 6e-103
Identities = 1438/2231 (64%), Gaps = 39/2231 (2%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||||||||| | ||| || |||| || || | | ||||||||| || || ||||
Sbjct 2415629 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCAGTCTTTAAT 2415688
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
|| ||||||| || || |||||||| || | ||| | || || |||
Sbjct 2415689 CCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCTTGATA 2415748
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
||||| || | ||||| |||||| ||||||||| |||| || | ||||| | ||
Sbjct 2415749 TGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATATCGATA 2415808
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957
|| |||||| | |||||||| | || || || | | ||||| || || || |
Sbjct 2415809 ATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGGGGATA 2415868
Query 78958 TTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014
|||| | || ||||| ||| | || ||||| ||| |||| || | || |||
Sbjct 2415869 TTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCATCGTTC 2415928
Query 79015 CATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073
|| ||| | || ||| | | | | | |||||||| | ||| ||||| ||
Sbjct 2415929 CA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAATTCACC 2415987
Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133
|| ||| ||||| | | ||| || || || |||||||| | ||||||| || ||
Sbjct 2415988 AGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACC 2416047
Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193
||||||||| | || || || |||||||| || |||||||| ||| ||||| | |||
Sbjct 2416048 CAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACC 2416107
Query 79194 GTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACA 79251
||| | | | ||| | ||| | ||||||||||| | || | ||
Sbjct 2416108 --ATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTTCTG 2416165
Query 79252 TTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAA 79311
| ||| | |||||||||| | ||| | || ||||||| ||| |||||||||
Sbjct 2416166 TCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGTTTCATAA 2416225
Query 79312 GGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCG 79371
|| ||||| | || || |||||| | || || | || ||| ||| || ||||||
Sbjct 2416226 GGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGATAGTTTCG 2416285
Query 79372 AAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATG-GATAATTTAAGAGAAT 79430
||||| | | || | ||| |||||| || ||| ||| ||| || || | ||
Sbjct 2416286 AAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAA-ACCAT 2416344
Query 79431 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAAT 79490
|| || || || || ||||| || || | | || ||||| |||||| | ||||| |
Sbjct 2416345 GAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGATTT 2416404
Query 79491 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTAT 79550
|||||||| || | || |||||||| | ||||| | | | || | || | || ||
Sbjct 2416405 CTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTAC-GAGTAA 2416463
Query 79551 TA-CTTTGACCACATCCTTTAGTTTGAGAAAAT----CAAATCGT-----CCATCTATT- 79599
| ||||| ||||| | | ||| ||| | | || ||| |||||| |
Sbjct 2416464 CAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTTGTT 2416523
Query 79600 --ACAAAC-ATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 79656
|||||| | | | ||||| | ||||||| ||||| || || || || | | | |
Sbjct 2416524 CAACAAACGAAGGT-AACGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGCT 2416582
Query 79657 GCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGA 79716
| |||| | |||||| || | ||| | | || || | |||||||| | ||
Sbjct 2416583 GAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTCTGG 2416642
Query 79717 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGA 79776
|| ||| ||||||| ||||||||||| | ||||| || ||||||||||| | |||
Sbjct 2416643 TTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTGA 2416702
Query 79777 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTT--TT 79834
| ||| | || | | ||| | | ||||||| || | || || | | ||
Sbjct 2416703 GCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTTT--TTCTACCACGACCTT 2416760
Query 79835 CTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAG 79894
| ||||| |||| | || || | |||||||| || || ||| | ||||| |
Sbjct 2416761 CCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCGGCCAATCCTG 2416820
Query 79895 GACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGA 79954
|| ||| | ||| | | ||| | |||||| |||| | | |||| |||||||| |
Sbjct 2416821 GAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAACA 2416880
Query 79955 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 80014
||| |||||||| | || |||| |||||| | |||| || || || || |
Sbjct 2416881 AATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGTGGT 2416940
Query 80015 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 80074
||||| | | || | ||| | | |||||| ||||| ||||| | || | || |
Sbjct 2416941 TCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCAA 2417000
Query 80075 TAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 80134
| | || |||| ||||| || || ||||| | || | || ||||| || |||| |
Sbjct 2417001 AAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAAAACAC 2417060
Query 80135 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGG 80194
| ||| || ||||||||||| || ||||| || || || | ||||| ||| |||
Sbjct 2417061 GAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGG 2417120
Query 80195 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 80254
|||||| || ||| | ||| || || || || | || || ||||| || ||
Sbjct 2417121 AACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGCACAAG 2417180
Query 80255 GTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGC 80314
|||||| || ||||| || || || || ||| || |||| || | |||||
Sbjct 2417181 TTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAG 2417240
Query 80315 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 80374
|||||||| | ||| || |||||||| || ||||||| | || |||||
Sbjct 2417241 ATGACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCATGAGTAAAGT 2417300
Query 80375 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTC 80434
|| ||| |||| | || || || ||||| || | ||||| | | ||| || |
Sbjct 2417301 ATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCTCTTCCATGTATAC 2417360
Query 80435 CTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 80494
| | || || | ||| | || ||||| ||||||||| | | || ||| || |
Sbjct 2417361 CGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTACCATTGATACGTA 2417420
Query 80495 ACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTC 80552
|||| || ||| |||| |||||||| ||||||||||||||||| ||||| || || ||
Sbjct 2417421 ACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAA--TCACGGTC 2417478
Query 80553 GTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-CATGGTGATAC 80611
|| | ||| | ||||| | || ||| || | | || | ||| ||| | | |
Sbjct 2417479 ATAGACAATTGCTGAGTTCAATTCATCAGCATTCTCTTGAATGATATCGTATGTT--TCC 2417536
Query 80612 -TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCC 80670
||||||| || |||| || | ||| || || | ||| | | | ||||| |
Sbjct 2417537 TTTGAAATCATGGGAGCGTGAAGATTAGTTTCTGGGTTGATATATTCGTACAAATCTTTG 2417596
Query 80671 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCG 80730
|| | | | | | ||| | |||| || || | ||| ||||| || || || ||
Sbjct 2417597 GAAACCTGAGAATACAATTTAATGGTTTGTTTATGCAAATTGGATACCGCGATCCTTGCT 2417656
Query 80731 GCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGA 80790
|| || | ||||| ||||| ||| || || ||| || || | || || |||| |
Sbjct 2417657 GCCAAGACAGCATAGTCTGGGTGTATGGTGGTCATAGTAGCAGCAGTCTCAGCAGCCAAA 2417716
Query 80791 GTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATT 80850
| ||||| || | ||||| || || | |||| || || || || || ||
Sbjct 2417717 TTATCCAACTCAATGGTTGTGACACCTTGGTATACACCAGCAATGACTTTTTGAGTAATA 2417776
Query 80851 TTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTG 80910
|| || || | ||||| | || ||| ||||| |||||| || || | || |||
Sbjct 2417777 GCAACTGGTTCAACATGATTTGAGTCTAAACCATAGCATAATCTTTGAACTCTAGCAGTG 2417836
Query 80911 ATTTTATCAAA 80921
||||| |||||
Sbjct 2417837 ATTTTGTCAAA 2417847
Score = 320 bits (354), Expect = 2e-82
Identities = 614/898 (68%), Gaps = 9/898 (1%)
Strand=Plus/Minus
Query 49648 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 49707
||||| | |||||| || |||||| || ||| || | ||||| || ||||| ||
Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239
Query 49708 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 49767
|| || |||| || || |||||||| ||||| || ||||| || ||||| |||| ||||
Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179
Query 49768 ttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATT 49827
||| ||||| || | |||||||| || |||||||| | |||| ||| | |
Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119
Query 49828 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATG 49887
| ||||||||| || | | ||||||| | ||| |||||| ||||||| ||||||
Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059
Query 49888 GATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGT 49947
|| || || || ||||| | |||| | | | | ||| ||| ||||||
Sbjct 2540058 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGG 2539999
Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007
||| | |||||||| || || ||| | ||| ||||| | || ||||| |||||||
Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939
Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067
|| || || | ||| ||||| | || | || || | ||| || || || ||||||||
Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879
Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTGGC 50126
||| || ||||| ||||| || || || || ||||| | |||||| || | | || |
Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819
Query 50127 GCTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183
| | || || ||||| || || |||||||| ||||||||||| | || || ||
Sbjct 2539818 TCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGT 2539760
Query 50184 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 50243
||| || ||||| || | ||| ||| || ||| || | |||||| || |||||
Sbjct 2539759 TTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAA 2539700
Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303
| || |||| || ||||||||||| || || || |||||||||||| || |
Sbjct 2539699 TAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTT 2539640
Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363
||| || | ||| || ||||| | |||| ||| | || || ||||| || || ||
Sbjct 2539639 AGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACC 2539580
Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG 50423
|| || ||||| || ||||| | | ||||| ||| || |||
Sbjct 2539579 ATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAA 2539520
Query 50424 TTTAT---TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480
||| | ||||||||| | ||||||| || ||| | |||||| ||||||| |||||
Sbjct 2539519 TTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGA 2539460
Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538
||||| || || || ||||| | |||||| ||||| ||| |||||| || || |||
Sbjct 2539459 AGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 2539402
>seq4
Length=1591921
Score = 98.7 bits (108), Expect = 1e-15
Identities = 237/355 (67%), Gaps = 14/355 (4%)
Strand=Plus/Minus
Query 78829 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 78888
||||| |||| |||||||| ||| ||| |||||||| |||||| |||||||||
Sbjct 908394 TCTGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCCCTATCTGCAGCC 908336
Query 78889 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 78948
|| | ||| || ||| || || ||||| | ||| |||| | | || ||||||
Sbjct 908335 ATATCTATAATATCCTTCTGCTTAAGCTCCCACACCGTTCTATATAATTCTTTGATATCT 908276
Query 78949 TCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003
| || | | | ||| | ||||| || || || || ||||| |||||| | |
Sbjct 908275 TTGGGTATCACCGATATGTCT--TGAATCGAGCCGCCGTCCTGAATAATTCTATTCCTCA 908218
Query 79004 TCTCTTCATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGATTAACTA 79060
|| | |||||||| | | | || | | || | | ||||| | || || |
Sbjct 908217 TCGCCGAATTCCATA---TACCCAAATCTGAAAGGTCTTTGATGAGATACTTGTTCACCA 908161
Query 79061 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCG 79120
|||| || || ||||| | ||||| || ||||| | ||| ||||| ||||| |
Sbjct 908160 CTTGGAACTCGCCAGATATTACTCGACGTGTGTATAAATTGGACGTATACGGTTCAAAAC 908101
Query 79121 ATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAA 79175
||||||| ||||||||| |||| ||||| || || ||||| ||||| | |||
Sbjct 908100 ATTCATTGAATCCCAAAATCTGAGATGTTGAAGCAGTAGGCATGGGTGCTATCAA 908046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268728173120
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