Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1 340 2e-88 >seq1 Length=2936865 Score = 340 bits (376), Expect = 2e-88 Identities = 672/983 (68%), Gaps = 30/983 (3%) Strand=Plus/Minus Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAA---------ATAACG 13574 || ||||| |||| |||| |||| | || | |||||||| | ||||| Sbjct 2540343 TAGAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTGTTTTCACTCTTGGCCATAACA 2540284 Query 13575 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGAT 13634 || ||||||||| ||| |||||| ||||||||||| || || ||||| ||| || Sbjct 2540283 CCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAA 2540224 Query 13635 ATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTC 13693 || |||||||||||||| |||||||| | |||||| | ||||| | | ||| | | Sbjct 2540223 ATGTTTTCCATAAAATCGAATGGATT-AGTGACATTGTAAACTTTTTTATTACCCAAAGC 2540165 Query 13694 TAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACC 13753 | | |||||||||||||| ||| |||| ||||||| ||||||| | |||||||||||| Sbjct 2540164 AACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACC 2540105 Query 13754 TATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTT 13813 | || | || || | || || || ||||||||||| || ||||| || | Sbjct 2540104 CAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGT 2540045 Query 13814 TATAATAATTGTAATAATCTCATTAGAA--GGAGGATATTTTAGATGTTTAAAAATTAAA 13871 ||||| || || |||| || || || || || || ||| ||| | |||| Sbjct 2540044 AATAATTCTTTCAACGATCT--TTGGATCTGGTCTATGTTGTAAATGGGCAAATAATAAA 2539987 Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 || ||||| ||| || | || || || | || ||| | |||||| || || |||||| Sbjct 2539986 CATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAAT 2539927 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAAT 13991 ||||||||||| |||| ||| || ||||| || || | |||||||| || || || Sbjct 2539926 CCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAG 2539867 Query 13992 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTTTGTTCG 14049 || || ||||| ||||| || || | |||| || ||||| |||| | | || | Sbjct 2539866 ATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGAATCTTGG 2539807 Query 14050 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14109 |||||| | | ||||| |||| || |||||||| || ||||||||||||| Sbjct 2539806 --ATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCAT 2539749 Query 14110 TAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATA 14167 | ||||| | || ||||| || | |||| || || || ||||| | ||| || Sbjct 2539748 TGAATAAGAAGTCAGCTTCTTTTGGATCCTTG--ATATAAGTTTCAATCAATAATGAGTA 2539691 Query 14168 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGA 14227 |||| ||||| ||||||||||| || || || || || || || ||||||| | Sbjct 2539690 AGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGG 2539631 Query 14228 CCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14287 ||| ||||| | |||| |||| |||| || |||||||| |||||||| || Sbjct 2539630 AATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGATGC 2539571 Query 14288 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT---T 14344 ||||| || ||||| || || |||||| | | || | || ||| | ||||| | Sbjct 2539570 GGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTCTCT 2539511 Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14404 |||||| | ||| ||| | ||| | ||| ||| ||||||| || ||| |||| Sbjct 2539510 CCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGC 2539451 Query 14405 TTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTCGAAG- 14463 ||| || |||||| ||| ||||| | ||| || ||||| | || || ||| | Sbjct 2539450 TTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGAC--ATAACGACGT 2539393 Query 14464 ATGTT-TCTTTAAGAATTGGTTC 14485 |||| ||||| | || |||||| Sbjct 2539392 GTGTTCTCTTTCAAAAGTGGTTC 2539370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727952027200