Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq1 340 2e-88
>seq1
Length=2936865
Score = 340 bits (376), Expect = 2e-88
Identities = 672/983 (68%), Gaps = 30/983 (3%)
Strand=Plus/Minus
Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAA---------ATAACG 13574
|| ||||| |||| |||| |||| | || | |||||||| | |||||
Sbjct 2540343 TAGAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTGTTTTCACTCTTGGCCATAACA 2540284
Query 13575 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGAT 13634
|| ||||||||| ||| |||||| ||||||||||| || || ||||| ||| ||
Sbjct 2540283 CCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAA 2540224
Query 13635 ATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTC 13693
|| |||||||||||||| |||||||| | |||||| | ||||| | | ||| | |
Sbjct 2540223 ATGTTTTCCATAAAATCGAATGGATT-AGTGACATTGTAAACTTTTTTATTACCCAAAGC 2540165
Query 13694 TAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACC 13753
| | |||||||||||||| ||| |||| ||||||| ||||||| | ||||||||||||
Sbjct 2540164 AACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACC 2540105
Query 13754 TATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTT 13813
| || | || || | || || || ||||||||||| || ||||| || |
Sbjct 2540104 CAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGT 2540045
Query 13814 TATAATAATTGTAATAATCTCATTAGAA--GGAGGATATTTTAGATGTTTAAAAATTAAA 13871
||||| || || |||| || || || || || || ||| ||| | ||||
Sbjct 2540044 AATAATTCTTTCAACGATCT--TTGGATCTGGTCTATGTTGTAAATGGGCAAATAATAAA 2539987
Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931
|| ||||| ||| || | || || || | || ||| | |||||| || || ||||||
Sbjct 2539986 CATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAAT 2539927
Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAAT 13991
||||||||||| |||| ||| || ||||| || || | |||||||| || || ||
Sbjct 2539926 CCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAG 2539867
Query 13992 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTTTGTTCG 14049
|| || ||||| ||||| || || | |||| || ||||| |||| | | || |
Sbjct 2539866 ATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGAATCTTGG 2539807
Query 14050 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14109
|||||| | | ||||| |||| || |||||||| || |||||||||||||
Sbjct 2539806 --ATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCAT 2539749
Query 14110 TAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATA 14167
| ||||| | || ||||| || | |||| || || || ||||| | ||| ||
Sbjct 2539748 TGAATAAGAAGTCAGCTTCTTTTGGATCCTTG--ATATAAGTTTCAATCAATAATGAGTA 2539691
Query 14168 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGA 14227
|||| ||||| ||||||||||| || || || || || || || ||||||| |
Sbjct 2539690 AGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGG 2539631
Query 14228 CCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14287
||| ||||| | |||| |||| |||| || |||||||| |||||||| ||
Sbjct 2539630 AATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGATGC 2539571
Query 14288 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT---T 14344
||||| || ||||| || || |||||| | | || | || ||| | ||||| |
Sbjct 2539570 GGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTCTCT 2539511
Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14404
|||||| | ||| ||| | ||| | ||| ||| ||||||| || ||| ||||
Sbjct 2539510 CCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGC 2539451
Query 14405 TTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTCGAAG- 14463
||| || |||||| ||| ||||| | ||| || ||||| | || || ||| |
Sbjct 2539450 TTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGAC--ATAACGACGT 2539393
Query 14464 ATGTT-TCTTTAAGAATTGGTTC 14485
|||| ||||| | || ||||||
Sbjct 2539392 GTGTTCTCTTTCAAAAGTGGTTC 2539370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727952027200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |