Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1 336 2e-87 >seq1 Length=2936865 Score = 336 bits (372), Expect = 2e-87 Identities = 643/940 (68%), Gaps = 22/940 (2%) Strand=Plus/Minus Query 13312 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAA---------ATAACG 13362 || ||||| |||| |||| |||| | || | |||||||| | ||||| Sbjct 2540343 TAGAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTGTTTTCACTCTTGGCCATAACA 2540284 Query 13363 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGAT 13422 || ||||||||| ||| |||||| |||||||| || || || ||||| ||| || Sbjct 2540283 CCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAA 2540224 Query 13423 ATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTC 13481 || ||||||||||||||||||||||| || ||||| | ||||| | | ||| | | Sbjct 2540223 ATGTTTTCCATAAAATCGAATGGATTAGT-GACATTGTAAACTTTTTTATTACCCAAAGC 2540165 Query 13482 TAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACC 13541 | |||||||||||||||| ||| |||| ||||||| ||||||| | |||||||||||| Sbjct 2540164 AACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACC 2540105 Query 13542 TATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTT 13601 | || | || || | || ||| || ||||||||||| || ||||| || | Sbjct 2540104 CAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGT 2540045 Query 13602 TATAATAATCTTAATAATGTCATTAGAA--GGAGGATATTTTAGATGTTTAAAAATTAAA 13659 ||||| | | || || | || || || || || || ||| ||| | |||| Sbjct 2540044 AATAATTCTTTCAACGATCT--TTGGATCTGGTCTATGTTGTAAATGGGCAAATAATAAA 2539987 Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 || ||||| ||| || | || || || | || ||| | |||||| || || |||||| Sbjct 2539986 CATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAAT 2539927 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779 ||||||||||| |||| ||| || ||||| || || | || ||||| || || || Sbjct 2539926 CCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAG 2539867 Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839 || || ||||| ||||| || || | | || || ||||| |||| | | | Sbjct 2539866 ATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGAATCTTGG 2539807 Query 13840 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTG 13899 |||||| | | ||||| |||| || |||||||| || ||||| || |||||| Sbjct 2539806 ATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCATTG 2539747 Query 13900 AATAA-ATGT-TCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 13957 ||||| | || ||||| || | |||| || || || ||||| | ||| || Sbjct 2539746 AATAAGAAGTCAGCTTCTTTTGGATCCTTG--ATATAAGTTTCAATCAATAATGAGTAAG 2539689 Query 13958 TTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14017 |||| ||||| |||||||| || || || || || || ||| || ||||||||| Sbjct 2539688 TTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAA 2539629 Query 14018 ATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTG 14077 ||| || || | |||| |||| ||||||| ||||||||||||||||| || | Sbjct 2539628 TTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGATGCGG 2539569 Query 14078 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT---TCC 14134 |||| || ||||| || || |||||| | | || | || ||| | ||||| ||| Sbjct 2539568 CAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTCTCTCC 2539509 Query 14135 AATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTT 14194 |||| | ||| ||| | ||| | ||| ||| ||||||| || ||| |||||| Sbjct 2539508 AATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGCTT 2539449 Query 14195 TTTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14234 | || |||||| ||| ||||| | ||| || ||||| Sbjct 2539448 TCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAA 2539409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588752141120