Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 304 2e-77 >seq1 Length=2936865 Score = 304 bits (336), Expect = 2e-77 Identities = 1417/2232 (63%), Gaps = 41/2232 (2%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || || ||||| | || || ||||||| || | | ||||||||| || || |||| Sbjct 2415629 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCAGTCTTTAAT 2415688 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || ||||||| ||||| |||||||| || | ||| || | | || || || Sbjct 2415689 CCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGG-TCCTTGAT 2415747 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 || || || | || || |||||| ||||||||| |||| || | ||||| | || Sbjct 2415748 ATGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATATCGAT 2415807 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039 || |||||| | |||||||| | || || || | | ||||| || || || | Sbjct 2415808 AATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGGGGAT 2415867 Query 71040 GTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096 |||| | || ||||| ||| | || |||||| ||| | || || | || || Sbjct 2415868 ATTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCATCGTT 2415927 Query 71097 CCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTC 71155 ||| ||| | || ||| | | | | | |||||||| | ||| ||||| | Sbjct 2415928 CCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAATTCAC 2415986 Query 71156 CAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTC 71215 ||| ||| ||||| | | ||| || || || || ||||| | | ||||| || | Sbjct 2415987 CAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTAC 2416046 Query 71216 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGAC 71275 |||||||||| | || || || || ||||| || |||||||| | | ||||| | || Sbjct 2416047 CCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATAC 2416106 Query 71276 CATGTGATCGG--ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAAC 71333 ||||| | || | ||| | ||| | ||||||| ||| | || | || Sbjct 2416107 CATGT--TTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTTCT 2416164 Query 71334 NNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTA 71393 | || | || ||||||| || || || || Sbjct 2416165 GTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGTTTCATA 2416224 Query 71394 TGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTC 71453 || ||||||| || || | |||| | || || | || | | ||| || ||||| Sbjct 2416225 AGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGATAGTTTC 2416284 Query 71454 GAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATG-GATAATTTAAGAGAA 71512 |||||| | | || | ||| ||||| || ||| ||| ||| || || | | Sbjct 2416285 GAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAA-ACCA 2416343 Query 71513 TAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAA 71572 | || || || || || ||||| || || | | || |||||||||||| | ||||| Sbjct 2416344 TGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGATT 2416403 Query 71573 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTA 71632 | |||||||| || | || |||||||| | ||||| | | | || | || | || || Sbjct 2416404 TCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTAC-GAGTA 2416462 Query 71633 TTA-CTTTGACCACATCCTTTAGTTTGAGAAAAT-----CAAA----TCTCCCATCTATT 71682 | ||||| ||||| | | ||| ||| | ||| | | |||||| | Sbjct 2416463 ACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTTGT 2416522 Query 71683 ---ACAAAC-ACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 71738 |||||| | | | || |||| ||||||| ||||| || || || || | | | | Sbjct 2416523 TCAACAAACGAAGGT-AACGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGC 2416581 Query 71739 GGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTG 71798 | |||| | ||||||| || | || | | ||||| | |||||||| | || Sbjct 2416582 TGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTCTG 2416641 Query 71799 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTG 71858 || ||| ||||||| ||||||||||| | || || || ||||||||||| | || Sbjct 2416642 GTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTG 2416701 Query 71859 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT--T 71916 || ||| | || | | ||| | | ||||||| || | || | || | | | Sbjct 2416702 AGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTTTT--TCTACCACGACCT 2416759 Query 71917 TCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCA 71976 || ||||| |||| | || || | |||||||| || ||| | | | ||||| Sbjct 2416760 TCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCGGCCAATCCT 2416819 Query 71977 GGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAG 72036 ||| |||||| ||| | | ||||| |||||| |||| | | |||| |||||||| Sbjct 2416820 GGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAAC 2416879 Query 72037 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 72096 | ||| |||||||| | || |||| |||||| | |||| || || || || Sbjct 2416880 AAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGTGG 2416939 Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156 |||||| | | || | ||| | | |||||| ||||| ||||| | || | || Sbjct 2416940 TTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCA 2416999 Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216 | | | || || | ||||| || || ||||| | || | || ||||| || |||| Sbjct 2417000 AAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAAAACA 2417059 Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276 | | ||| || ||||||||||| || | ||| || || || | ||||| ||| || Sbjct 2417060 CGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAGTG 2417119 Query 72277 GCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 72336 | |||||| ||| ||| | ||| || || || || | || || ||||| || || Sbjct 2417120 GAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGCACAA 2417179 Query 72337 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 72396 |||||| || ||||| || || || ||| ||| || |||| || | ||||| Sbjct 2417180 GTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAA 2417239 Query 72397 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 72456 |||||||| | ||| || |||||||| || ||||||| | || ||||| Sbjct 2417240 GATGACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCATGAGTAAAG 2417299 Query 72457 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATT 72516 || ||| |||| | || || || ||||| || | ||||| | | |||||| Sbjct 2417300 TATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCTCTTCCATGTATA 2417359 Query 72517 CCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTC 72576 || | || || | ||| | || |||||| ||||||||| | | || ||| || Sbjct 2417360 CCGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTACCATTGATACGT 2417419 Query 72577 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 72634 ||||| || ||| |||| |||||||| ||||||||||||||||| ||||| || || | Sbjct 2417420 AACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAA--TCACGGT 2417477 Query 72635 CGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATC-CATGGTGATA 72693 | || | ||| | || || | || ||| || | | || ||||| ||| | | Sbjct 2417478 CATAGACAATTGCTGAGTTCAATTCATCAGCATTCTCTTGAATGATATCGTATGTT--TC 2417535 Query 72694 C-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTC 72752 | ||||||| || |||| || | ||| || || | ||| | | | ||||| | Sbjct 2417536 CTTTGAAATCATGGGAGCGTGAAGATTAGTTTCTGGGTTGATATATTCGTACAAATCTTT 2417595 Query 72753 CATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGC 72812 || | | | | | ||| | |||| || || | ||| ||||| || || || || Sbjct 2417596 GGAAACCTGAGAATACAATTTAATGGTTTGTTTATGCAAATTGGATACCGCGATCCTTGC 2417655 Query 72813 GGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAG 72872 || | | ||||| ||||| ||| || || ||| || || | || || |||| Sbjct 2417656 TGCCAAGACAGCATAGTCTGGGTGTATGGTGGTCATAGTAGCAGCAGTCTCAGCAGCCAA 2417715 Query 72873 AGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTAT 72932 | | ||||| || | ||||| || || | |||| || || || || || || Sbjct 2417716 ATTATCCAACTCAATGGTTGTGACACCTTGGTATACACCAGCAATGACTTTTTGAGTAAT 2417775 Query 72933 TTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGT 72992 || || || | ||||| | || ||| ||||| |||||| || || | || || Sbjct 2417776 AGCAACTGGTTCAACATGATTTGAGTCTAAACCATAGCATAATCTTTGAACTCTAGCAGT 2417835 Query 72993 GATTTTATCAAA 73004 |||||| ||||| Sbjct 2417836 GATTTTGTCAAA 2417847 Score = 277 bits (306), Expect = 2e-69 Identities = 608/901 (67%), Gaps = 15/901 (2%) Strand=Plus/Minus Query 41753 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTC 41812 ||||| | |||||| || |||||| || ||| || | ||||| || ||||| ||| Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239 Query 41813 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 41872 || || |||| || || |||||||| ||||| || ||||| || ||||| |||| |||| Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179 Query 41873 ttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATT 41932 ||| ||||| || | |||||||| || | ||||| | |||| ||| | | Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119 Query 41933 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 41992 | ||||||||| || | | ||||||| | ||| |||||| ||||||| |||||| Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059 Query 41993 GAGACCGCGTCTGTTATAATAGATCTTACT--GTTTCTTCACTC-GGTGGATACAATAAA 42049 || || || || ||||| |||| | | | || || ||| || |||| Sbjct 2540058 TCAACAGCTTCAGTAATAAT---TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAA 2540002 Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109 || ||| | |||||||| || || ||| | ||| || || | || |||||||||| Sbjct 2540001 TGGGCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCG 2539942 Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAAT 42169 ||||| || || | ||| ||||| | || | || || | ||| || ||||| |||||| Sbjct 2539941 TTGGAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAAT 2539882 Query 42170 GATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACC 42228 || ||| || ||||| ||||| || || || || |||| | |||||| || | | Sbjct 2539881 GAACCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAAT 2539822 Query 42229 GGCACTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 42285 | | | | || || ||||| || || |||||||| ||||||||||| | || || Sbjct 2539821 GCCTCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAAT 2539763 Query 42286 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGAT 42345 ||||| || ||||| || | ||| ||| || ||| || | ||| || || || Sbjct 2539762 GGTTTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAAT 2539703 Query 42346 CAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 42405 ||| | || ||||||| ||||||||||| || || || |||||||||||| | Sbjct 2539702 CAATAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGA 2539643 Query 42406 TCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTAT 42465 | | || || | || || ||||| | |||| ||| | || || || || || || Sbjct 2539642 TTTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAAT 2539583 Query 42466 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGT 42525 || || || ||||| || ||||| | | ||||| | ||| | | Sbjct 2539582 ACCATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTT 2539523 Query 42526 TAATTTAT---TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAA 42582 |||||| | ||||||||| | ||||||| || ||| | |||||| | ||||| || Sbjct 2539522 TAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAA 2539463 Query 42583 TGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAAC 42642 ||| || || || || || ||||| | |||||| ||||| ||| ||||| || || || Sbjct 2539462 TGAAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGAC 2539403 Query 42643 A 42643 | Sbjct 2539402 A 2539402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139132886080