Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 132 7e-26 >seq1 Length=2936865 Score = 132 bits (146), Expect = 7e-26 Identities = 387/585 (66%), Gaps = 16/585 (3%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 ||||||| ||||| || ||||| || ||| |||||||||| || ||| |||| || || | Sbjct 2539407 TGTTTCCAATCAGATACCATGAAATCTGGCAAATGTACAAGAAAGCTGAGGCTTCATTCT 2539466 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGG-GAGACTCGTTTGACT 125114 |||| | ||||| ||||| | || || || | |||||| |||| || || Sbjct 2539467 GGACAGCTGAAGAAATCGATTTAGGTAAAGATCTTCATGATTGGAGAGAAAAATTAAAC- 2539525 Query 125115 GAAACTGAGCGAGAGTTTATATCGCAC--ATTTTGGCCTTCTTTGCCGGCTCCGATGGAA 125172 || | ||| || ||||| || | || ||||| |||||||||| |||||||| | Sbjct 2539526 GATAATGAACGTTTCTTTAT--CGGAAGAATCTTGGCTTTCTTTGCCGCATCCGATGGTA 2539583 Query 125173 TCGTCAACGACAATCTGTTG--ACACGATTCT-CTCAAGAGTTGACCATTCCAGAGGTGT 125229 | || || || || || || | || ||| || ||| || | |||||||| | Sbjct 2539584 TTGTTAATGAGAACTTGGTGGAAAACTTTTCAGCTGAAG--TTCAA-ATTCCAGAAGCTA 2539640 Query 125230 CGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACAC 125289 | || |||||||||||||| ||||| || ||| | ||||| |||| ||||| | Sbjct 2539641 AATCTTTCTACGGATTCCAAATTATGATGGAAAACATTCACTCAGAAACTTACTCATTAT 2539700 Query 125290 TGATTGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCGA 125347 ||||||| | || || |||| ||| || | || | | || || || || || Sbjct 2539701 TGATTGAAACTTATATCAAGGATC--CAAAAGAAGCTGACTTCTTATTCAATGCTATTGA 2539758 Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407 || | || || || |||||| | |||| || | |||||| | || | | Sbjct 2539759 AACCATTCCACAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATCCAAGATTCCGA 2539818 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 | | | || ||||| ||| |||| || ||||| || || || || ||||| || || Sbjct 2539819 GGCATTGTTTGCCGAGAGATTGGTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGG 2539878 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 | ||||| | || || ||| | ||||| | || | ||||| ||| | || | Sbjct 2539879 TTCATTTGCATCTATTTTCTGGTTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTC 2539938 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 ||||| || || | ||| ||||| || ||||| ||||||||| Sbjct 2539939 CAACGAATTAATTTGTCGTGACGAAGGTTTACACACTGACTTTGC 2539983 Score = 86.0 bits (94), Expect = 9e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 97776 GGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTT 97835 ||| |||||||||||||| ||||||| || ||||| || ||| |||| || ||| | || Sbjct 2416107 GGTATGAGAAACTCTTTGTTGGTGGCTCCAATGCCAACCGCTTCCACATCACAAATTTTG 2416048 Query 97836 GGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTAC 97877 || || ||||| ||||||||| | ||| || ||||| ||| Sbjct 2416047 GGTAACAATGAATGTTTTGAACCATACACTTCGAACATCTAC 2416006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059125894080