Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1 226 2e-54 >seq1 Length=2936865 Score = 226 bits (250), Expect = 2e-54 Identities = 568/853 (67%), Gaps = 29/853 (3%) Strand=Plus/Minus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 ||||||||| || |||||| |||||||| || || || || || | || ||||| || Sbjct 2540278 TTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAAATGTT 2540219 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTTTTACACCCTAATTCTAG 12975 ||||||||||||||| ||||| | || || ||| ||||||| || || | | Sbjct 2540218 TTCCATAAAATCGAATGGATTAGT-GA--CATTGTAAACTTTTTTATTACCCAAAGCAAC 2540162 Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035 || ||||| ||||||||||| || | || || |||||| | ||| ||||| || | Sbjct 2540161 CAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCCAA 2540102 Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095 ||| | || || | ||| || || || || | |||||| || ||||| ||||| ||| Sbjct 2540101 TAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAAT 2540042 Query 13096 TATGTCTCTTATTACGTTCTCT---AATGGAGGATTTGATAGATGCTTAAACATCATACA 13152 || |||| ||| ||| | ||| || | || ||| ||| | | ||| Sbjct 2540041 AAT---TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGGGCAAATAATAAACA 2539985 Query 13153 TGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACC 13212 |||||| ||| ||| || ||||| || | || |||| ||||| || || |||| || Sbjct 2539984 TGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAATCC 2539925 Query 13213 CGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTAT 13272 ||||| | |||| ||| || | ||| || |||| ||||| ||||| ||||| || Sbjct 2539924 TGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAGAT 2539865 Query 13273 TCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC-TCTA 13331 |||||||| || || || || | ||| || || || || | | | || | | Sbjct 2539864 ACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAAC-AATGCCTCGGAATCTTGGA 2539806 Query 13332 TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAA 13391 |||| | ||||||| | || || | ||||| || |||| || || || | Sbjct 2539805 TCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCATTGA 2539746 Query 13392 ATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTT 13451 |||| | | ||| || || |||||||| || |||||||| || ||| Sbjct 2539745 ATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGAGTAAGTTT 2539686 Query 13452 CTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCT 13511 |||| ||||| ||||||||| |||||||| || || ||| || |||| |||| | | Sbjct 2539685 CTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAATTT 2539626 Query 13512 GAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaa 13571 ||||||| | |||| |||| | ||||| || ||||| || || || || |||| Sbjct 2539625 GAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGATGCGGCAA 2539566 Query 13572 aaaaaG-CAAGTATGT---GCTTAATAAA--ttttttttCGTTTTCTGACAACTT---TA 13622 | |||| |||| | | | | || ||| || || |||||| || || | Sbjct 2539565 AGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTT------AATTTTTCTC 2539512 Query 13623 ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAG 13682 |||||| ||| |||||| |||||| | || ||| | ||||| || ||||| ||| Sbjct 2539511 TCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAG 2539452 Query 13683 CCTTCTTATACAT 13695 | ||||| ||||| Sbjct 2539451 CTTTCTTGTACAT 2539439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982357979216