Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq1 226 2e-54
>seq1
Length=2936865
Score = 226 bits (250), Expect = 2e-54
Identities = 568/853 (67%), Gaps = 29/853 (3%)
Strand=Plus/Minus
Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918
||||||||| || |||||| |||||||| || || || || || | || ||||| ||
Sbjct 2540278 TTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAAATGTT 2540219
Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTTTTACACCCTAATTCTAG 12975
||||||||||||||| ||||| | || || ||| ||||||| || || | |
Sbjct 2540218 TTCCATAAAATCGAATGGATTAGT-GA--CATTGTAAACTTTTTTATTACCCAAAGCAAC 2540162
Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035
|| ||||| ||||||||||| || | || || |||||| | ||| ||||| || |
Sbjct 2540161 CAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCCAA 2540102
Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095
||| | || || | ||| || || || || | |||||| || ||||| ||||| |||
Sbjct 2540101 TAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAAT 2540042
Query 13096 TATGTCTCTTATTACGTTCTCT---AATGGAGGATTTGATAGATGCTTAAACATCATACA 13152
|| |||| ||| ||| | ||| || | || ||| ||| | | |||
Sbjct 2540041 AAT---TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGGGCAAATAATAAACA 2539985
Query 13153 TGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACC 13212
|||||| ||| ||| || ||||| || | || |||| ||||| || || |||| ||
Sbjct 2539984 TGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAATCC 2539925
Query 13213 CGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTAT 13272
||||| | |||| ||| || | ||| || |||| ||||| ||||| ||||| ||
Sbjct 2539924 TGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAGAT 2539865
Query 13273 TCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC-TCTA 13331
|||||||| || || || || | ||| || || || || | | | || | |
Sbjct 2539864 ACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAAC-AATGCCTCGGAATCTTGGA 2539806
Query 13332 TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAA 13391
|||| | ||||||| | || || | ||||| || |||| || || || |
Sbjct 2539805 TCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCATTGA 2539746
Query 13392 ATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTT 13451
|||| | | ||| || || |||||||| || |||||||| || |||
Sbjct 2539745 ATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGAGTAAGTTT 2539686
Query 13452 CTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCT 13511
|||| ||||| ||||||||| |||||||| || || ||| || |||| |||| | |
Sbjct 2539685 CTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAATTT 2539626
Query 13512 GAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaa 13571
||||||| | |||| |||| | ||||| || ||||| || || || || ||||
Sbjct 2539625 GAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGATGCGGCAA 2539566
Query 13572 aaaaaG-CAAGTATGT---GCTTAATAAA--ttttttttCGTTTTCTGACAACTT---TA 13622
| |||| |||| | | | | || ||| || || |||||| || || |
Sbjct 2539565 AGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTT------AATTTTTCTC 2539512
Query 13623 ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAG 13682
|||||| ||| |||||| |||||| | || ||| | ||||| || ||||| |||
Sbjct 2539511 TCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAG 2539452
Query 13683 CCTTCTTATACAT 13695
| ||||| |||||
Sbjct 2539451 CTTTCTTGTACAT 2539439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982357979216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |