Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1 219 1e-51
seq2 140 7e-28
>seq1
Length=2936865
Score = 219 bits (242), Expect = 1e-51
Identities = 622/938 (66%), Gaps = 37/938 (4%)
Strand=Plus/Plus
Query 268673 GAACCGCTTTTAGTAAATAACCCAGATAGATTTGTGATATTTCCAATACAGC-ATGGTGA 268731
||||| ||||| | | ||| || | | | ||| || |||||||| ||| | |||
Sbjct 2539370 GAACCACTTTTGAAAGAGAACACACGTCGTTATGTCATGTTTCCAAT-CAGATACCATGA 2539428
Query 268732 TATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCT 268791
|| ||| |||||||| | || | ||||| || ||||| | |||||| | ||| |
Sbjct 2539429 AATCTGGCAAATGTACAAGAAAGCTGAGGCTTCATTCTGGACAGCTGAAGAAATCGATTT 2539488
Query 268792 GTCTTATGA-CTTAATAGATTGGA---AAAATTTAAAACCAGAA-GAAAGAAGATTTATA 268846
| | || ||| || ||||||| |||| ||||| | | || ||| | |||||
Sbjct 2539489 AGGTAAAGATCTTCAT-GATTGGAGAGAAAAATTAAA-CGATAATGAACGTTTCTTTATC 2539546
Query 268847 TCTTATATTCTTGCGTTT-TTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGA 268905
| | ||||| ||| ||||| | |||||||| ||||| || || | || ||
Sbjct 2539547 GGA-AGAATCTTGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAGAACTTGGTGGA 2539605
Query 268906 GAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGC 268965
|| || | || || || ||||| ||||| | || ||| ||||||||||| ||
Sbjct 2539606 AAACTTTTCAGCTGAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTAT 2539665
Query 268966 TATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAA 269025
|| ||||| ||||| ||||| | ||| |||| || || |||||||| | |||
Sbjct 2539666 GATGGAAAACATTCACTCAGAAACTTACTCATTATTGATTGAAACTTATATCAAGGAT-- 2539723
Query 269026 CAACGAAAAGAAAA-GACTATTT--TC--TTCTATGAGAACTATGGACTGTGTGAGaaaa 269080
| ||||||| |||| || || | |||| ||| || | | |||
Sbjct 2539724 ---CCAAAAGAAGCTGACTTCTTATTCAATGCTATTGAAACCATTCCACAAATTAAAAAG 2539780
Query 269081 aaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCGCC-----TTACGGAGAAAGGT 269135
|| |||| ||||| | | |||||| | ||| || | | || | |||| | |
Sbjct 2539781 AAGGCTGATTGGGCCATCAGATGGATCCAAGATTCCGAGGCATTGTTTGCCGAGAGA--T 2539838
Query 269136 TAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTT 269195
| |||||||| || ||||| |||||||| || || || || ||||| |||| || |
Sbjct 2539839 TGGTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCT 2539898
Query 269196 GGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGG 269255
|||||||||||||||| | |||||||||||||||||||| |||||||| || | | |
Sbjct 2539899 GGTTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTG 2539958
Query 269256 ACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAAC 269315
|||||||||||||| ||||| || |||||||||||| | ||| | ||| | ||
Sbjct 2539959 ACGAAGGTTTACACACTGACTTTGCATGTTTATTATTTGCCCATT---TACAACATAGAC 2540015
Query 269316 CTTCTCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTC 269375
| || | | | || | |||||| | ||||||| | |||| ||||||
Sbjct 2540016 CAGATCCAAAGATCGTTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCT 2540075
Query 269376 TAACGGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATA 269435
| || || ||| || | | | | | ||||||||| | |||| ||| |||||
Sbjct 2540076 TTACTGATGCTTTACCAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATG 2540135
Query 269436 TTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAA---TATAACG 269492
|| | || || |||||||||| |||| |||| || || ||||||| || || |
Sbjct 2540136 TTGAATTTGTTGCTGATAGATTATTGGTTGCTTTGGG---TAATAAAAAAGTTTACAATG 2540192
Query 269493 TTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCG 269552
| ||||| || ||||||||| || || || || | |||||| | |||||||| |
Sbjct 2540193 TCACTAATCCATTCGATTTTATGGAAAACATTTCCTTGGCTGGTAAGACCAATTTCTTTG 2540252
Query 269553 AGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATG 269590
| ||| | || | | ||||| ||| ||||| |||
Sbjct 2540253 AAAAGAGAGTTTCTGATTATCAAAAAGCTGGTGTTATG 2540290
>seq2
Length=2433673
Score = 140 bits (154), Expect = 7e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || ||||||||||| || || || ||||| |||| |||||||||||||||| ||||
Sbjct 21191 TGCAAAGTAGATTCTTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTCTTCTAATTGT 21132
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| || || || || || ||||| || || |||||
Sbjct 21131 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCTTTGTCTTGGATCTTA 21072
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || ||| | ||| || || | || ||||||||||| ||
Sbjct 21071 GACTTGACATTGTCAATAGTGTCGGAGGATTCAACTTCCAAAGTGATAGTCTTACCGGTT 21012
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| ||||| || || || |||||||||
Sbjct 21011 AAAGTTTTGACGAAAATTTGCATTTTG 20985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398281981664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |