Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 2e-32
seq4 89.7 6e-13
>seq1
Length=2936865
Score = 154 bits (170), Expect = 2e-32
Identities = 281/406 (69%), Gaps = 18/406 (4%)
Strand=Plus/Plus
Query 7009 TAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTAT-----ATCAGATG 7063
||||||||||| |||||||||||||||||||| ||| ||| || ||||| |
Sbjct 1312711 TAAAATTGACAAAATACATGACATGGAGGTAAT---GCC--ATCAATGGGAAATCAGGAG 1312765
Query 7064 GATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAA 7123
|||||||||| | ||| | ||| | || ||||| ||||| || || ||||| | || |
Sbjct 1312766 GATTCCAAGCTGACATGATAATTCTTCGATCATACGGATTAGTCTTCAATTTCTTGATTA 1312825
Query 7124 TTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAG 7183
|||||||||||| | || || || || | |||| ||||| | ||| | ||
Sbjct 1312826 CATCTTGTAATTGATCAAATCCTTGGCCGGTGTAGTCGGTATCACAATCTTGATATTCAG 1312885
Query 7184 CTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGAT 7243
| ||||||||||||||||| || ||||||| || || ||||||||||| |||||||
Sbjct 1312886 CACCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGATGAG 1312945
Query 7244 TAAATCCTAATCGATTTAAATTAGATTTT----GATCCATAAGCATCCCAAATATGTACA 7299
| ||||| || | | | | | ||| | || |||| | | ||||| || | ||
Sbjct 1312946 TTAATCCCAA--GTTGTCCA-AAAATTCTCGCAGA-CCATTACCTTCCCATATCTTGACC 1313001
Query 7300 GAtttttttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTCT 7359
||||| ||| | | || |||||||| | ||||| |||||||| |
Sbjct 1313002 CCTTTTTCACTCAAAATCTTGGCATCGGTAGATCCAGCTACAAACCACAAAAGTTCGTGA 1313061
Query 7360 ACTATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAATG 7405
| ||| || |||||| || ||| ||||||| |||||||||||
Sbjct 1313062 ATTATGCCTTTGGAAAACACTCGTTTAGTAGTGAGTAAAGGGAATG 1313107
Score = 102 bits (112), Expect = 1e-16
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 6829 ATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATA 6888
|||||||| || || | ||||||||| ||||| ||||||||||| || || | ||||
Sbjct 1312468 ATATGATCCAAGTATACATGAGCATCACCTAGGGTATGAATAAACTCTCCGCAGTCCATA 1312527
Query 6889 TCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACA 6948
|| || | || ||||| | | || | ||||||||| || || | ||| || || |||
Sbjct 1312528 TCTACCACATGTGCAATCATCTTGGTAAGTAATGCATAGGATGCAATATTGAATGGGACA 1312587
Query 6949 CCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAA 6992
|| |||||||| || ||||||||||| || ||| |||||
Sbjct 1312588 CCCAATCCCATGTCACACGATCTTTGATATAATAAACAGGATAA 1312631
>seq4
Length=1591921
Score = 89.7 bits (98), Expect = 6e-13
Identities = 314/486 (65%), Gaps = 21/486 (4%)
Strand=Plus/Minus
Query 164484 CGAAATAATaaaaaaaTTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCC 164543
|||||| | |||| || | || || ||| ||||| | ||||| ||||||||||
Sbjct 523711 CGAAATTGCAGAAAAGTTGGACTACAAGCATTGTAAAGGTTTGTTATTGTATGGACCTCC 523652
Query 164544 TGGTTGCGGTAAAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAATCGC---GACC 164600
|||| |||||||| || || || || | |||| || | || ||| | || |
Sbjct 523651 TGGTACAGGTAAAACCTTGATTGCACG-TAAATTGTCGAAAATGTTGAATGGTAAGGAAC 523593
Query 164601 CGTTAAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAA 164660
| || || || |||||||| ||| | |||| || ||||| |||| || || | ||
Sbjct 523592 CA--AAGATAGTCAATGGTCCAGAAATGTTGAGTAAGTATGTTGGTGCATCTGAGGAGAA 523535
Query 164661 TGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGAAAGCAGGTTTAGCTAGTAA 164720
|| | || ||||| |||| ||||||| ||| | || |||| | |
Sbjct 523534 CATTCGTAACTTGTTCAAGGATGCTGAAGCTGAATATAAACTCAAAGGTGAGGACTCCGA 523475
Query 164721 ATTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGGT----GATA 164776
|| || |||||| | || ||||| | ||| | | | |||| || | ||| || |
Sbjct 523474 CTTGCACGTTATTATCTTCGATGAATTGGATTCCGTATTCAAACAAAGAGGTTCAGGAAA 523415
Query 164777 AT--------ATTATTCATGATG-CAGTG--GTTAATCAGTTGCTTTCTAAAATAGATGG 164825
| | | | || || || || || || || ||| | || ||||| || ||
Sbjct 523414 AAGCGACGGAACTGGTGTTGGTGACAATGTAGTGAACCAATTGTTATCAAAAATGGACGG 523355
Query 164826 TGTAGAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGA 164885
||| || ||||| ||||| | || | ||||||||||| ||| |||||| |||||
Sbjct 523354 TGTTGATCAGTTAAACAATATCCTTGTTATTGGTATGACCAATAGACTTGATTTGATTGA 523295
Query 164886 TGATGCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAA 164945
| ||| || || |||||||| |||| ||| | | || ||||| | ||||| || |
Sbjct 523294 TACTGCCTTGTTGAGACCTGGTAGATTTGAAATTCAGATTGAAATTGCTTTACCGGATGA 523235
Query 164946 AGAAGG 164951
| ||||
Sbjct 523234 AAAAGG 523229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871940412800
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