Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1 277 2e-69 >seq1 Length=2936865 Score = 277 bits (306), Expect = 2e-69 Identities = 638/957 (67%), Gaps = 30/957 (3%) Strand=Plus/Minus Query 21122 TTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCttttttt---------GAC 21172 |||||||| ||||| |||| |||| ||| | || | ||||| ||| | | Sbjct 2540349 TTTATTTAGAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTGTTTTCACTCTTGGCC 2540290 Query 21173 ATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCC 21232 |||| || ||||||||||||| |||||| ||||| || ||||| ||||| || || Sbjct 2540289 ATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCC 2540230 Query 21233 AATGATATAGATTCCATAAAATCAAATGGATTT-TCAGATT-TAAA-TATTTTATTACAA 21289 || || || |||||||||||| |||||||| | | ||| |||| | ||||||||| Sbjct 2540229 AAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTTTATTAC-- 2540172 Query 21290 CCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAA 21349 ||| | ||||||||||| || |||||||| | ||||||||||||||||| |||| Sbjct 2540171 -CCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAA 2540113 Query 21350 TTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACG 21409 |||||||| | || | || || | ||| | || || || |||||| || || Sbjct 2540112 TTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACA 2540053 Query 21410 GCTTC---AACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTA 21466 ||||| || |||| | | | ||| | || | || || ||| || | Sbjct 2540052 GCTTCAGTAATAATTCTTTCAACGATCTT---TGGATCTGGTCTATGTTGTAAATGGGCA 2539996 Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526 || | ||||||||||| ||| || |||||||| || | || |||||||| || || Sbjct 2539995 AATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAG 2539936 Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATG--CTC 21584 || ||||| || ||||| || ||||| || || ||||| || || || ||||||| | Sbjct 2539935 AAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCA 2539876 Query 21585 CTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATT 21644 |||||| || || || ||||| ||||| || ||||| |||| || | | | | Sbjct 2539875 CTGAAA--AAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCT 2539818 Query 21645 CTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTAT 21704 | ||| |||||| | ||||| | ||||| | |||||| ||| || | Sbjct 2539817 CGGAATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTT 2539758 Query 21705 CAATAGCTTTTAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNN 21763 ||||||| || || |||| | | ||| | | ||| | || Sbjct 2539757 CAATAGCATTGAATAAGAAG-TCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAAT 2539699 Query 21764 NNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTT 21823 || |||| || || || ||||| ||| || || |||||||| ||| || | Sbjct 2539698 AATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTA 2539639 Query 21824 GCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCA 21883 || |||| | |||||| || | |||| || ||||||| ||||| || || ||| Sbjct 2539638 GCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCA 2539579 Query 21884 TCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT 21943 || |||||||| || ||||| || || ||||| | ||||| ||||| ||||| Sbjct 2539578 TCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAAT 2539519 Query 21944 TTTT---TCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTA 22000 |||| ||||||| | |||||| |||||| | |||||||| |||||| || | Sbjct 2539518 TTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAA 2539459 Query 22001 GCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACA 22057 || ||| || || ||||| |||||| |||| ||| | |||||||| || ||| Sbjct 2539458 GCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 2539402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900746809920