Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq1 277 2e-69
>seq1
Length=2936865
Score = 277 bits (306), Expect = 2e-69
Identities = 638/957 (67%), Gaps = 30/957 (3%)
Strand=Plus/Minus
Query 21122 TTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCttttttt---------GAC 21172
|||||||| ||||| |||| |||| ||| | || | ||||| ||| | |
Sbjct 2540349 TTTATTTAGAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTGTTTTCACTCTTGGCC 2540290
Query 21173 ATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCC 21232
|||| || ||||||||||||| |||||| ||||| || ||||| ||||| || ||
Sbjct 2540289 ATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCC 2540230
Query 21233 AATGATATAGATTCCATAAAATCAAATGGATTT-TCAGATT-TAAA-TATTTTATTACAA 21289
|| || || |||||||||||| |||||||| | | ||| |||| | |||||||||
Sbjct 2540229 AAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTTTATTAC-- 2540172
Query 21290 CCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAA 21349
||| | ||||||||||| || |||||||| | ||||||||||||||||| ||||
Sbjct 2540171 -CCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAA 2540113
Query 21350 TTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACG 21409
|||||||| | || | || || | ||| | || || || |||||| || ||
Sbjct 2540112 TTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACA 2540053
Query 21410 GCTTC---AACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTA 21466
||||| || |||| | | | ||| | || | || || ||| || |
Sbjct 2540052 GCTTCAGTAATAATTCTTTCAACGATCTT---TGGATCTGGTCTATGTTGTAAATGGGCA 2539996
Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526
|| | ||||||||||| ||| || |||||||| || | || |||||||| || ||
Sbjct 2539995 AATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAG 2539936
Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATG--CTC 21584
|| ||||| || ||||| || ||||| || || ||||| || || || ||||||| |
Sbjct 2539935 AAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCA 2539876
Query 21585 CTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATT 21644
|||||| || || || ||||| ||||| || ||||| |||| || | | | |
Sbjct 2539875 CTGAAA--AAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCT 2539818
Query 21645 CTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTAT 21704
| ||| |||||| | ||||| | ||||| | |||||| ||| || |
Sbjct 2539817 CGGAATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTT 2539758
Query 21705 CAATAGCTTTTAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNN 21763
||||||| || || |||| | | ||| | | ||| | ||
Sbjct 2539757 CAATAGCATTGAATAAGAAG-TCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAAT 2539699
Query 21764 NNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTT 21823
|| |||| || || || ||||| ||| || || |||||||| ||| || |
Sbjct 2539698 AATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTA 2539639
Query 21824 GCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCA 21883
|| |||| | |||||| || | |||| || ||||||| ||||| || || |||
Sbjct 2539638 GCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCA 2539579
Query 21884 TCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT 21943
|| |||||||| || ||||| || || ||||| | ||||| ||||| |||||
Sbjct 2539578 TCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAAT 2539519
Query 21944 TTTT---TCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTA 22000
|||| ||||||| | |||||| |||||| | |||||||| |||||| || |
Sbjct 2539518 TTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAA 2539459
Query 22001 GCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACA 22057
|| ||| || || ||||| |||||| |||| ||| | |||||||| || |||
Sbjct 2539458 GCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 2539402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900746809920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |