Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 333 3e-86
seq4 104 3e-17
>seq1
Length=2936865
Score = 333 bits (368), Expect = 3e-86
Identities = 1426/2238 (64%), Gaps = 53/2238 (2%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
||||||||||| | ||| || |||| || || | | ||||||||| || || ||||
Sbjct 2415629 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCAGTCTTTAAT 2415688
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114
|| ||||||| ||||| |||||||| || | ||| | || || |||
Sbjct 2415689 CCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCTTGATA 2415748
Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174
||||| || | ||||| |||||| ||||||||| |||| || | ||||| | ||
Sbjct 2415749 TGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATATCGATA 2415808
Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234
|| |||||| | |||||||| | || || || | | ||||| || || || |
Sbjct 2415809 ATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGGGGATA 2415868
Query 62235 TTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291
|||| | || ||||| ||| | || ||||| ||| |||| || |||| |||
Sbjct 2415869 TTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCATCGTTC 2415928
Query 62292 CATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350
|| ||| | || ||| | | | | | |||||||| | ||| ||||| ||
Sbjct 2415929 CA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAATTCACC 2415987
Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410
|| ||| ||||| | | ||| || || || || ||||| | | ||||| || ||
Sbjct 2415988 AGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACC 2416047
Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470
||||||||| | || || || || ||||| || |||||||| ||| ||||| | |||
Sbjct 2416048 CAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACC 2416107
Query 62471 GTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 62528
||||| | | ||| | ||| | ||||||| ||| | || | ||
Sbjct 2416108 --ATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTTCTG 2416165
Query 62529 NNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTATC 62584
||||| | ||| | | |||| | ||||| || || ||
Sbjct 2416166 TCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTG----ATCCTTGGTAGGTTTC 2416221
Query 62585 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 62644
|| || ||||| | | || | |||| | || || | ||| ||| ||| || ||
Sbjct 2416222 ATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGATAGT 2416281
Query 62645 TTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG-GATAATTTAAGA 62703
|||||| || | | |||| ||| ||||| || ||| ||| ||| || || |
Sbjct 2416282 TTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAA-A 2416340
Query 62704 GAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 62763
|| || || || || || ||||| || || | | || ||||| |||||| | ||||
Sbjct 2416341 CCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAG 2416400
Query 62764 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62823
| | |||||||| || | || |||||||| | ||||| | | | || | || |
Sbjct 2416401 ATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAG 2416460
Query 62824 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT----CAAATCGC-----CCATCTA 62874
|| |||||| ||||| | || ||| ||| | | || || ||||||
Sbjct 2416461 TAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTT 2416520
Query 62875 TT---ACAAAC-ATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 62930
| |||||| | | | || |||| ||||||| ||||| || || || || | | |
Sbjct 2416521 GTTCAACAAACGAAGGT-AACGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGA 2416579
Query 62931 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGT 62990
| | |||| | || ||| || | || | | |||||| | |||||||| |
Sbjct 2416580 GCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTC 2416639
Query 62991 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63050
|| || ||| ||||||| ||||||||||| | |||||||| ||||||||||| |
Sbjct 2416640 TGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTT 2416699
Query 63051 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC--C 63108
|||| ||| | || | | ||| | | ||||||| || | ||| || | | |
Sbjct 2416700 TGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGT--TTTTCTACCACGAC 2416757
Query 63109 TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATC 63168
||| ||||| ||| | ||||| | |||||||| || || | | ||||||
Sbjct 2416758 CTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCGGCCAATC 2416817
Query 63169 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63228
| ||| ||||| ||| | | ||| | |||||| || | | | |||| |||||||
Sbjct 2416818 CTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAA 2416877
Query 63229 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63288
| | ||| |||||||| | || |||| |||||| | |||| ||| || || ||
Sbjct 2416878 ACAAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGT 2416937
Query 63289 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63348
|||||| | | || | ||| | | |||||| ||||| ||||| | || | |
Sbjct 2416938 GGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAG 2416997
Query 63349 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63408
| | | | ||||| | ||||| || || ||||| | || | || ||||| || |||
Sbjct 2416998 CAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAAAA 2417057
Query 63409 CTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCAC 63468
| | | ||| || |||||||| || || |||| || ||||| | ||||| |||
Sbjct 2417058 CACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAG 2417117
Query 63469 TGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 63528
||| |||||| || ||| | ||| || || || || | || || ||||| || |
Sbjct 2417118 TGGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGCAC 2417177
Query 63529 ATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAAC 63588
| |||||| |||||||| ||||| || || ||| || |||| || | ||||
Sbjct 2417178 AAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAAC 2417237
Query 63589 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 63648
| |||||||| | ||| || |||||||| || ||||||| | || ||||
Sbjct 2417238 AAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCATGAGTAA 2417297
Query 63649 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT----ATATCCCATTGA 63704
| || ||| || | | || || || |||| ||| ||| ||||| | | |
Sbjct 2417298 AGTATCTTTGCGACATCAAGTTATAAGTTTCAA----TGACTCTTGGGATATCTCTTCCA 2417353
Query 63705 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63764
|| || || | || || | ||| | || ||||| ||||||||| | | || ||
Sbjct 2417354 TGTATACCGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTACCATTG 2417413
Query 63765 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 63822
|| ||||| || ||| |||| |||||||| ||||||||||||||||| ||||| |
Sbjct 2417414 ATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAA--T 2417471
Query 63823 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATC-CATG 63881
| || || || | ||| | ||||| | || ||| || | | || ||||| |||
Sbjct 2417472 CACGGTCATAGACAATTGCTGAGTTCAATTCATCAGCATTCTCTTGAATGATATCGTATG 2417531
Query 63882 GTGATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 63940
| | | ||||||| || |||| || | ||| || || | ||| | | | ||
Sbjct 2417532 TT--TCCTTTGAAATCATGGGAGCGTGAAGATTAGTTTCTGGGTTGATATATTCGTACAA 2417589
Query 63941 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 64000
||| | || | | | | | ||| | |||| || || | ||| ||||| || ||
Sbjct 2417590 ATCTTTGGAAACCTGAGAATACAATTTAATGGTTTGTTTATGCAAATTGGATACCGCGAT 2417649
Query 64001 TCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 64060
|| || || | | ||||| || || ||| || || ||| || || | || ||
Sbjct 2417650 CCTTGCTGCCAAGACAGCATAGTCTGGGTGTATGGTGGTCATAGTAGCAGCAGTCTCAGC 2417709
Query 64061 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120
|||| | | ||||| || | ||||| || || | |||| || ||| || ||
Sbjct 2417710 AGCCAAATTATCCAACTCAATGGTTGTGACACCTTGGTATACACCAGCAATGACTTTTTG 2417769
Query 64121 AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACATAATTTTCTAATACG 64180
|| || || || || | ||||| | || ||| ||||| |||||| || || |
Sbjct 2417770 AGTAATAGCAACTGGTTCAACATGATTTGAGTCTAAACCATAGCATAATCTTTGAACTCT 2417829
Query 64181 AGACGTGATTTTATCAAA 64198
|| |||||||| |||||
Sbjct 2417830 AGCAGTGATTTTGTCAAA 2417847
Score = 315 bits (348), Expect = 9e-81
Identities = 615/899 (68%), Gaps = 11/899 (1%)
Strand=Plus/Minus
Query 32992 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 33051
||||| | |||||| || |||||| || ||| || | ||||| || ||||| ||
Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239
Query 33052 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 33111
|| || |||| || || |||||||| ||||| || ||||| || ||||| |||| ||||
Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179
Query 33112 ttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATT 33171
||| ||||| || | |||||||| || || ||||| | |||| ||| | |
Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119
Query 33172 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATG 33231
| ||||||||| || | | ||||||| | ||| |||||| ||||||| ||||||
Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059
Query 33232 GATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGT 33291
|| || || || ||||| | |||| | | | | ||| ||| ||||||
Sbjct 2540058 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGG 2539999
Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351
||| | |||||||| || || ||| | ||| ||||| | || ||||| |||||||
Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939
Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411
|| || || | ||| ||||| | || | || || | ||| || || || || |||||
Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879
Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGC 33470
||| || ||||| ||||| || ||||| || |||| | |||||| || | | | |
Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819
Query 33471 GCTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527
| | || || ||||| || || |||||||| ||||||||||| | || || ||
Sbjct 2539818 TCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGT 2539760
Query 33528 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33587
||| || ||||| || | ||| ||| || ||| || | |||||| || |||||
Sbjct 2539759 TTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAA 2539700
Query 33588 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33647
| || |||| || ||||||||||| || || || |||||||||||| || |
Sbjct 2539699 TAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTT 2539640
Query 33648 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCC 33707
||| || | ||| || ||||| | |||| |||| |||| || ||||| || || ||
Sbjct 2539639 AGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACC 2539580
Query 33708 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA-ATATTTTTCGTCTGGTGTTA 33766
|| || ||||| || ||||| | | ||||| | | || | | || |||
Sbjct 2539579 ATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGT-TTA 2539521
Query 33767 GTTTAT---TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATG 33823
||| | ||||||||| | ||||||| || ||| | |||||| ||||||| ||||
Sbjct 2539520 ATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATG 2539461
Query 33824 ATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACA 33882
| ||||| || || || ||||| | |||||| |||| ||| |||||| || || |||
Sbjct 2539460 AAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 2539402
>seq4
Length=1591921
Score = 104 bits (114), Expect = 3e-17
Identities = 238/355 (67%), Gaps = 14/355 (4%)
Strand=Plus/Minus
Query 62106 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62165
||||| |||| |||||||| ||| ||| |||||||| |||||| |||||||||
Sbjct 908394 TCTGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCCCTATCTGCAGCC 908336
Query 62166 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62225
|| | ||| || ||| || || ||||| | ||| |||| | | || ||||||
Sbjct 908335 ATATCTATAATATCCTTCTGCTTAAGCTCCCACACCGTTCTATATAATTCTTTGATATCT 908276
Query 62226 TCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280
| || | | | ||| || |||| || || || || ||||| |||||| | |
Sbjct 908275 TTGGGTATCACCGATATGTCTT--GAATCGAGCCGCCGTCCTGAATAATTCTATTCCTCA 908218
Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA---CTCTAAGGAGATGCGGATTAACTA 62337
|| | |||||||| | | | | ||| || | | ||||| | || || |
Sbjct 908217 TCGCCGAATTCCATA---TACCCAAATCTGAAAGGTCTTTGATGAGATACTTGTTCACCA 908161
Query 62338 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCG 62397
|||| || || ||||| | ||||| || ||||| | ||| ||||||||||| |
Sbjct 908160 CTTGGAACTCGCCAGATATTACTCGACGTGTGTATAAATTGGACGTATACGGTTCAAAAC 908101
Query 62398 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62452
| ||||| ||||||||| |||| ||||| ||||| ||||| ||||| | |||
Sbjct 908100 ATTCATTGAATCCCAAAATCTGAGATGTTGAAGCAGTAGGCATGGGTGCTATCAA 908046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947137705280
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