Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 333 3e-86 seq4 104 3e-17 >seq1 Length=2936865 Score = 333 bits (368), Expect = 3e-86 Identities = 1426/2238 (64%), Gaps = 53/2238 (2%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| | ||| || |||| || || | | ||||||||| || || |||| Sbjct 2415629 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCAGTCTTTAAT 2415688 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || ||||||| ||||| |||||||| || | ||| | || || ||| Sbjct 2415689 CCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCTTGATA 2415748 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 ||||| || | ||||| |||||| ||||||||| |||| || | ||||| | || Sbjct 2415749 TGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATATCGATA 2415808 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || |||||| | |||||||| | || || || | | ||||| || || || | Sbjct 2415809 ATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGGGGATA 2415868 Query 62235 TTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 |||| | || ||||| ||| | || ||||| ||| |||| || |||| ||| Sbjct 2415869 TTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCATCGTTC 2415928 Query 62292 CATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350 || ||| | || ||| | | | | | |||||||| | ||| ||||| || Sbjct 2415929 CA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAATTCACC 2415987 Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410 || ||| ||||| | | ||| || || || || ||||| | | ||||| || || Sbjct 2415988 AGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACC 2416047 Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470 ||||||||| | || || || || ||||| || |||||||| ||| ||||| | ||| Sbjct 2416048 CAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACC 2416107 Query 62471 GTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 62528 ||||| | | ||| | ||| | ||||||| ||| | || | || Sbjct 2416108 --ATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTTCTG 2416165 Query 62529 NNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTATC 62584 ||||| | ||| | | |||| | ||||| || || || Sbjct 2416166 TCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTG----ATCCTTGGTAGGTTTC 2416221 Query 62585 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 62644 || || ||||| | | || | |||| | || || | ||| ||| ||| || || Sbjct 2416222 ATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGATAGT 2416281 Query 62645 TTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG-GATAATTTAAGA 62703 |||||| || | | |||| ||| ||||| || ||| ||| ||| || || | Sbjct 2416282 TTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAA-A 2416340 Query 62704 GAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 62763 || || || || || || ||||| || || | | || ||||| |||||| | |||| Sbjct 2416341 CCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAG 2416400 Query 62764 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62823 | | |||||||| || | || |||||||| | ||||| | | | || | || | Sbjct 2416401 ATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAG 2416460 Query 62824 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT----CAAATCGC-----CCATCTA 62874 || |||||| ||||| | || ||| ||| | | || || |||||| Sbjct 2416461 TAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTT 2416520 Query 62875 TT---ACAAAC-ATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 62930 | |||||| | | | || |||| ||||||| ||||| || || || || | | | Sbjct 2416521 GTTCAACAAACGAAGGT-AACGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGA 2416579 Query 62931 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGT 62990 | | |||| | || ||| || | || | | |||||| | |||||||| | Sbjct 2416580 GCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTC 2416639 Query 62991 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63050 || || ||| ||||||| ||||||||||| | |||||||| ||||||||||| | Sbjct 2416640 TGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTT 2416699 Query 63051 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC--C 63108 |||| ||| | || | | ||| | | ||||||| || | ||| || | | | Sbjct 2416700 TGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGT--TTTTCTACCACGAC 2416757 Query 63109 TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATC 63168 ||| ||||| ||| | ||||| | |||||||| || || | | |||||| Sbjct 2416758 CTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCGGCCAATC 2416817 Query 63169 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63228 | ||| ||||| ||| | | ||| | |||||| || | | | |||| ||||||| Sbjct 2416818 CTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAA 2416877 Query 63229 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63288 | | ||| |||||||| | || |||| |||||| | |||| ||| || || || Sbjct 2416878 ACAAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGT 2416937 Query 63289 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63348 |||||| | | || | ||| | | |||||| ||||| ||||| | || | | Sbjct 2416938 GGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAG 2416997 Query 63349 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63408 | | | | ||||| | ||||| || || ||||| | || | || ||||| || ||| Sbjct 2416998 CAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAAAA 2417057 Query 63409 CTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCAC 63468 | | | ||| || |||||||| || || |||| || ||||| | ||||| ||| Sbjct 2417058 CACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAG 2417117 Query 63469 TGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 63528 ||| |||||| || ||| | ||| || || || || | || || ||||| || | Sbjct 2417118 TGGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGCAC 2417177 Query 63529 ATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAAC 63588 | |||||| |||||||| ||||| || || ||| || |||| || | |||| Sbjct 2417178 AAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAAC 2417237 Query 63589 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 63648 | |||||||| | ||| || |||||||| || ||||||| | || |||| Sbjct 2417238 AAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCATGAGTAA 2417297 Query 63649 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT----ATATCCCATTGA 63704 | || ||| || | | || || || |||| ||| ||| ||||| | | | Sbjct 2417298 AGTATCTTTGCGACATCAAGTTATAAGTTTCAA----TGACTCTTGGGATATCTCTTCCA 2417353 Query 63705 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63764 || || || | || || | ||| | || ||||| ||||||||| | | || || Sbjct 2417354 TGTATACCGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTACCATTG 2417413 Query 63765 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 63822 || ||||| || ||| |||| |||||||| ||||||||||||||||| ||||| | Sbjct 2417414 ATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAA--T 2417471 Query 63823 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATC-CATG 63881 | || || || | ||| | ||||| | || ||| || | | || ||||| ||| Sbjct 2417472 CACGGTCATAGACAATTGCTGAGTTCAATTCATCAGCATTCTCTTGAATGATATCGTATG 2417531 Query 63882 GTGATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 63940 | | | ||||||| || |||| || | ||| || || | ||| | | | || Sbjct 2417532 TT--TCCTTTGAAATCATGGGAGCGTGAAGATTAGTTTCTGGGTTGATATATTCGTACAA 2417589 Query 63941 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 64000 ||| | || | | | | | ||| | |||| || || | ||| ||||| || || Sbjct 2417590 ATCTTTGGAAACCTGAGAATACAATTTAATGGTTTGTTTATGCAAATTGGATACCGCGAT 2417649 Query 64001 TCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 64060 || || || | | ||||| || || ||| || || ||| || || | || || Sbjct 2417650 CCTTGCTGCCAAGACAGCATAGTCTGGGTGTATGGTGGTCATAGTAGCAGCAGTCTCAGC 2417709 Query 64061 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120 |||| | | ||||| || | ||||| || || | |||| || ||| || || Sbjct 2417710 AGCCAAATTATCCAACTCAATGGTTGTGACACCTTGGTATACACCAGCAATGACTTTTTG 2417769 Query 64121 AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACATAATTTTCTAATACG 64180 || || || || || | ||||| | || ||| ||||| |||||| || || | Sbjct 2417770 AGTAATAGCAACTGGTTCAACATGATTTGAGTCTAAACCATAGCATAATCTTTGAACTCT 2417829 Query 64181 AGACGTGATTTTATCAAA 64198 || |||||||| ||||| Sbjct 2417830 AGCAGTGATTTTGTCAAA 2417847 Score = 315 bits (348), Expect = 9e-81 Identities = 615/899 (68%), Gaps = 11/899 (1%) Strand=Plus/Minus Query 32992 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 33051 ||||| | |||||| || |||||| || ||| || | ||||| || ||||| || Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239 Query 33052 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 33111 || || |||| || || |||||||| ||||| || ||||| || ||||| |||| |||| Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179 Query 33112 ttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATT 33171 ||| ||||| || | |||||||| || || ||||| | |||| ||| | | Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119 Query 33172 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATG 33231 | ||||||||| || | | ||||||| | ||| |||||| ||||||| |||||| Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059 Query 33232 GATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGT 33291 || || || || ||||| | |||| | | | | ||| ||| |||||| Sbjct 2540058 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGG 2539999 Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351 ||| | |||||||| || || ||| | ||| ||||| | || ||||| ||||||| Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939 Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411 || || || | ||| ||||| | || | || || | ||| || || || || ||||| Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879 Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGC 33470 ||| || ||||| ||||| || ||||| || |||| | |||||| || | | | | Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819 Query 33471 GCTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 | | || || ||||| || || |||||||| ||||||||||| | || || || Sbjct 2539818 TCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGT 2539760 Query 33528 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33587 ||| || ||||| || | ||| ||| || ||| || | |||||| || ||||| Sbjct 2539759 TTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAA 2539700 Query 33588 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33647 | || |||| || ||||||||||| || || || |||||||||||| || | Sbjct 2539699 TAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTT 2539640 Query 33648 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCC 33707 ||| || | ||| || ||||| | |||| |||| |||| || ||||| || || || Sbjct 2539639 AGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACC 2539580 Query 33708 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA-ATATTTTTCGTCTGGTGTTA 33766 || || ||||| || ||||| | | ||||| | | || | | || ||| Sbjct 2539579 ATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGT-TTA 2539521 Query 33767 GTTTAT---TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATG 33823 ||| | ||||||||| | ||||||| || ||| | |||||| ||||||| |||| Sbjct 2539520 ATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATG 2539461 Query 33824 ATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACA 33882 | ||||| || || || ||||| | |||||| |||| ||| |||||| || || ||| Sbjct 2539460 AAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 2539402 >seq4 Length=1591921 Score = 104 bits (114), Expect = 3e-17 Identities = 238/355 (67%), Gaps = 14/355 (4%) Strand=Plus/Minus Query 62106 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62165 ||||| |||| |||||||| ||| ||| |||||||| |||||| ||||||||| Sbjct 908394 TCTGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCCCTATCTGCAGCC 908336 Query 62166 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62225 || | ||| || ||| || || ||||| | ||| |||| | | || |||||| Sbjct 908335 ATATCTATAATATCCTTCTGCTTAAGCTCCCACACCGTTCTATATAATTCTTTGATATCT 908276 Query 62226 TCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280 | || | | | ||| || |||| || || || || ||||| |||||| | | Sbjct 908275 TTGGGTATCACCGATATGTCTT--GAATCGAGCCGCCGTCCTGAATAATTCTATTCCTCA 908218 Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA---CTCTAAGGAGATGCGGATTAACTA 62337 || | |||||||| | | | | ||| || | | ||||| | || || | Sbjct 908217 TCGCCGAATTCCATA---TACCCAAATCTGAAAGGTCTTTGATGAGATACTTGTTCACCA 908161 Query 62338 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCG 62397 |||| || || ||||| | ||||| || ||||| | ||| ||||||||||| | Sbjct 908160 CTTGGAACTCGCCAGATATTACTCGACGTGTGTATAAATTGGACGTATACGGTTCAAAAC 908101 Query 62398 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62452 | ||||| ||||||||| |||| ||||| ||||| ||||| ||||| | ||| Sbjct 908100 ATTCATTGAATCCCAAAATCTGAGATGTTGAAGCAGTAGGCATGGGTGCTATCAA 908046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947137705280