Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 196 1e-44 >seq1 Length=2936865 Score = 196 bits (216), Expect = 1e-44 Identities = 753/1163 (65%), Gaps = 46/1163 (4%) Strand=Plus/Minus Query 363427 CGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGT 363486 |||||||||||| | | | |||| | || |||||| || | ||| | |||||||| ||| Sbjct 2417418 CGTATCAATGGTAAAGTAGCTGAAAGACCACAGCATTTGATTATGAGAGTTGCTATCGGT 2417359 Query 363487 ATCCATTGCCCGGATGTTGATGCCGCGA----TTGAAACATATAAGCTTCTAAGT-GCTC 363541 || ||| | ||| || || || ||||||| ||||| ||| | || || Sbjct 2417358 ATACATGGAAGAGAT----ATCCCAAGAGTCATTGAAACTTATAA-CTTG-ATGTCGCAA 2417305 Query 363542 GTGTA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATG 363600 || || || || | | || ||| |||||||| |||| || ||||| ||| Sbjct 2417304 AGATACTTTACTCATGGTTCTCCTTGTTTGTTTAATGCTGGTACTCCAAAACCACAAATG 2417245 Query 363601 TCTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACT 363659 || ||||| |||||| | |||||| || ||||| || || ||||| | |||||| || Sbjct 2417244 TCATCTTG-TTTCTTGGTTGCAATGAAAGAAGATTCTATTGAAGGTATTTATGACAC-CT 2417187 Query 363660 TAAGAA-TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG 363718 ||| || ||||||| | ||||| |||| ||| || || |||||| | || ||||| Sbjct 2417186 TAAAAACTTGTGCTTTAATTTCAAAGAGTGCTGGTGGTATTGGTTTGCACATTCACAACA 2417127 Query 363719 TTCGTGCACAGAACAG-TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCC 363776 ||||| | || | ||| ||| || ||| || |||| | ||||| | | || Sbjct 2417126 TTCGTTC-CACTGGTGCTTATATTGCTGGTACAAACGG-TACTTCTAATGGTATTATCCC 2417069 Query 363777 CATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAA 363836 ||| ||||||| || |||| ||||| | || || || || ||||| ||| | Sbjct 2417068 TATGGTTCGTGTTTTCAACAACACTGCCCGTTATGTTGATCAAGGTGGTAACAAGAGACC 2417009 Query 363837 AGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCT 363896 || || |||||| ||||||| || || || ||||| ||||| || ||||| | Sbjct 2417008 TGGTGCTTTTGCTTTGTATCTTGAACCATGGCACAGTGATATCTTTGATTTCATTGAGAT 2416949 Query 363897 CCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956 | | || ||| || || || ||| | | || | ||| | ||| || | ||| | Sbjct 2416948 CAGAAAGAACCACGGTAAGGAAGAAATTAGAGCTAGAGATTTATTCCCGGCCTTGTGGAT 2416889 Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCC 364013 | | || ||||||||| | || || | ||| || ||| || | || | || Sbjct 2416888 TCCAGATTTGTTTATGAAGAGAGTTGAACAAAATGGTGAG---TGGACATTGTTCTCTCC 2416832 Query 364014 ACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAA 364073 | | ||| |||||| | |||| | |||||||| | ||||| | |||||||| Sbjct 2416831 AAATGAAGCTCCAGGATTGGCCGACACTTATGGTGACGAGTTTGTTGAGTTGTACGAAAA 2416772 Query 364074 GTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCAT 364133 |||||| ||| || | | | || || || || || ||| | |||| |||| Sbjct 2416771 ATATGAAAGGGAAGGTCGTGGTAGAAAAACCATCAAGGCTCAAAAGTTGTGGTACTCCAT 2416712 Query 364134 CATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCG 364193 | |||| | || | || || || || || | |||||||| || ||| | || ||| Sbjct 2416711 CTTGGAAGCTCAAACCGAAACTGGTACCCCATTCATGTTGTATAAGGATGCTTGTAACAC 2416652 Query 364194 CAAGTCCAACCAGCAGCACCTTGGTA----CAATTCAGCAGAGCAACCTATGTACCGAGA 364249 ||||||||||||| || | | |||| ||| || | |||| | ||| || | Sbjct 2416651 CAAGTCCAACCAGAAGAATTTAGGTATTATCAAATCTTC----CAACTTGTGTTGTGAAA 2416596 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTC 364309 || | |||||| | ||||| ||||| ||| || |||||| | || ||||| ||| | | Sbjct 2416595 TTGTCGAATACTCAGCTCCAGACGAAGTTGCTGTCTGTAACTTGGCATCGATTGCGTTAC 2416536 Query 364310 CGGCGTTTGT---AAAAGATGGTA------CTTTTGACCAC---CAGCATCTTTATGACG 364357 | ||||||| | ||||||||| ||| || || | | | |||| | Sbjct 2416535 CTTCGTTTGTTGAACAAGATGGTAAACACGCTTGGTACAACTTTGACAAGTTGCATGATG 2416476 Query 364358 TAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTC 364417 | ||| | || |||| | || | ||| || || |||| ||||||||| ||| | | Sbjct 2416475 TTACCAAAGTTGTTACTCGTAACTTGAACAGAGTCATAGACAGGAATTATTACCCAGTCC 2416416 Query 364418 CTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCG 364477 ||||||| ||| ||||| ||| | || | || |||| | || || || || | | Sbjct 2416415 CTGAAGCTGAGAAATCTAACATGAGACACAGACCAATTGCATTGGGAGTCCAAGGTTTGG 2416356 Query 364478 CTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATA 364537 |||| | || ||| | | | || | ||| ||||| | || ||| | | |||| | Sbjct 2416355 CTGATGCCTTCATGGTTTTAAGAATCGGATTCGATTCCCAAGAAGCTAGAGAATTAAACA 2416296 Query 364538 AGGAGATCTTTGAAACAATGTAT 364560 | || || ||||| || ||| Sbjct 2416295 TTCAAATTTTCGAAACTATCTAT 2416273 Score = 170 bits (188), Expect = 5e-37 Identities = 486/741 (66%), Gaps = 16/741 (2%) Strand=Plus/Plus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278 || |||||||| | | || ||||| ||| |||||| | ||| || ||| || || Sbjct 2539559 GCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAGAACTTGGTGGAAAACTTTTCAGCT 2539618 Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| ||||| ||||| || | || |||||| || | ||||| ||||| ||||| || Sbjct 2539619 GAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTATGATGGAAAACATT 2539678 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAA--GATAAAGACGAACAAC 22396 ||| | ||||| || || | || | | ||| || | ||| | | ||| Sbjct 2539679 CACTCAGAAACTTACTCATTATTGATTGAA--ACTTATATCAAGGATCCAAAAGAAGCTG 2539736 Query 22397 GAAACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGC 22456 ||||||| || ||| ||||||| | |||||| || ||||| |||||||| Sbjct 2539737 ACTTCTTATTCAATGCTATTGAAACCATTCCACAAATTAAAAAGAAGGCTGATTGGGCCA 2539796 Query 22457 TGAAATGGATGAACAAT---GAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGG 22513 | | |||||| | || || | || || || | | |||| || |||| | Sbjct 2539797 TCAGATGGATCCAAGATTCCGAGGCATTGTTTGCCGAGAGATTGGTTGCTTTCGCTGCTG 2539856 Query 22514 TTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAA 22573 ||||||| || || || ||| ||||| | || || ||| | || ||| | | Sbjct 2539857 TTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGGTTGAAGAAAAGAGGTT 2539916 Query 22574 TTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCG 22633 | ||||| || |||| || || || || |||||| | || || || ||| | || || | Sbjct 2539917 TGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAGGTTTACACACTG 2539976 Query 22634 ATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAAACTGTAC 22693 | ||||| ||| | ||| | || || | |||| || || || || | Sbjct 2539977 ACTTTGCATGTTTATTATTTGCCCATT-TACAA--CATAGAC---CAGATCCAAAGATCG 2540030 Query 22694 TTGATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGTTAC 22750 |||| | ||||||| | || |||||| ||||| ||| || || || |||| Sbjct 2540031 TTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTACTGATGCTTTAC 2540090 Query 22751 CAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAG 22810 |||| ||| | | ||||| ||| ||| |||| || |||| || |||||||||| | Sbjct 2540091 CAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTTGAATTTGTTGCTG 2540150 Query 22811 ATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAAT 22870 || | |||| || | | ||| || ||| ||| || ||| ||||||||| || | Sbjct 2540151 ATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTAATCCATTCGATT 2540210 Query 22871 GGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAAT 22930 |||||| ||||| | | || |||||||||||||| ||||| |||||| ||| | Sbjct 2540211 TTATGGAAAACATTTCCTTGGCTGGTAAGACCAATTTCTTTGAAAAGAGAGTTTCTGATT 2540270 Query 22931 ACCAAAAAGCAGGTGTTATGG 22951 | |||||||| |||||||||| Sbjct 2540271 ATCAAAAAGCTGGTGTTATGG 2540291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353466406256