Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1 196 1e-44
>seq1
Length=2936865
Score = 196 bits (216), Expect = 1e-44
Identities = 753/1163 (65%), Gaps = 46/1163 (4%)
Strand=Plus/Minus
Query 363427 CGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGT 363486
|||||||||||| | | | |||| | || |||||| || | ||| | |||||||| |||
Sbjct 2417418 CGTATCAATGGTAAAGTAGCTGAAAGACCACAGCATTTGATTATGAGAGTTGCTATCGGT 2417359
Query 363487 ATCCATTGCCCGGATGTTGATGCCGCGA----TTGAAACATATAAGCTTCTAAGT-GCTC 363541
|| ||| | ||| || || || ||||||| ||||| ||| | || ||
Sbjct 2417358 ATACATGGAAGAGAT----ATCCCAAGAGTCATTGAAACTTATAA-CTTG-ATGTCGCAA 2417305
Query 363542 GTGTA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATG 363600
|| || || || | | || ||| |||||||| |||| || ||||| |||
Sbjct 2417304 AGATACTTTACTCATGGTTCTCCTTGTTTGTTTAATGCTGGTACTCCAAAACCACAAATG 2417245
Query 363601 TCTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACT 363659
|| ||||| |||||| | |||||| || ||||| || || ||||| | |||||| ||
Sbjct 2417244 TCATCTTG-TTTCTTGGTTGCAATGAAAGAAGATTCTATTGAAGGTATTTATGACAC-CT 2417187
Query 363660 TAAGAA-TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG 363718
||| || ||||||| | ||||| |||| ||| || || |||||| | || |||||
Sbjct 2417186 TAAAAACTTGTGCTTTAATTTCAAAGAGTGCTGGTGGTATTGGTTTGCACATTCACAACA 2417127
Query 363719 TTCGTGCACAGAACAG-TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCC 363776
||||| | || | ||| ||| || ||| || |||| | ||||| | | ||
Sbjct 2417126 TTCGTTC-CACTGGTGCTTATATTGCTGGTACAAACGG-TACTTCTAATGGTATTATCCC 2417069
Query 363777 CATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAA 363836
||| ||||||| || |||| ||||| | || || || || ||||| ||| |
Sbjct 2417068 TATGGTTCGTGTTTTCAACAACACTGCCCGTTATGTTGATCAAGGTGGTAACAAGAGACC 2417009
Query 363837 AGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCT 363896
|| || |||||| ||||||| || || || ||||| ||||| || ||||| |
Sbjct 2417008 TGGTGCTTTTGCTTTGTATCTTGAACCATGGCACAGTGATATCTTTGATTTCATTGAGAT 2416949
Query 363897 CCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956
| | || ||| || || || ||| | | || | ||| | ||| || | ||| |
Sbjct 2416948 CAGAAAGAACCACGGTAAGGAAGAAATTAGAGCTAGAGATTTATTCCCGGCCTTGTGGAT 2416889
Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCC 364013
| | || ||||||||| | || || | ||| || ||| || | || | ||
Sbjct 2416888 TCCAGATTTGTTTATGAAGAGAGTTGAACAAAATGGTGAG---TGGACATTGTTCTCTCC 2416832
Query 364014 ACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAA 364073
| | ||| |||||| | |||| | |||||||| | ||||| | ||||||||
Sbjct 2416831 AAATGAAGCTCCAGGATTGGCCGACACTTATGGTGACGAGTTTGTTGAGTTGTACGAAAA 2416772
Query 364074 GTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCAT 364133
|||||| ||| || | | | || || || || || ||| | |||| ||||
Sbjct 2416771 ATATGAAAGGGAAGGTCGTGGTAGAAAAACCATCAAGGCTCAAAAGTTGTGGTACTCCAT 2416712
Query 364134 CATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCG 364193
| |||| | || | || || || || || | |||||||| || ||| | || |||
Sbjct 2416711 CTTGGAAGCTCAAACCGAAACTGGTACCCCATTCATGTTGTATAAGGATGCTTGTAACAC 2416652
Query 364194 CAAGTCCAACCAGCAGCACCTTGGTA----CAATTCAGCAGAGCAACCTATGTACCGAGA 364249
||||||||||||| || | | |||| ||| || | |||| | ||| || |
Sbjct 2416651 CAAGTCCAACCAGAAGAATTTAGGTATTATCAAATCTTC----CAACTTGTGTTGTGAAA 2416596
Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTC 364309
|| | |||||| | ||||| ||||| ||| || |||||| | || ||||| ||| | |
Sbjct 2416595 TTGTCGAATACTCAGCTCCAGACGAAGTTGCTGTCTGTAACTTGGCATCGATTGCGTTAC 2416536
Query 364310 CGGCGTTTGT---AAAAGATGGTA------CTTTTGACCAC---CAGCATCTTTATGACG 364357
| ||||||| | ||||||||| ||| || || | | | |||| |
Sbjct 2416535 CTTCGTTTGTTGAACAAGATGGTAAACACGCTTGGTACAACTTTGACAAGTTGCATGATG 2416476
Query 364358 TAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTC 364417
| ||| | || |||| | || | ||| || || |||| ||||||||| ||| | |
Sbjct 2416475 TTACCAAAGTTGTTACTCGTAACTTGAACAGAGTCATAGACAGGAATTATTACCCAGTCC 2416416
Query 364418 CTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCG 364477
||||||| ||| ||||| ||| | || | || |||| | || || || || | |
Sbjct 2416415 CTGAAGCTGAGAAATCTAACATGAGACACAGACCAATTGCATTGGGAGTCCAAGGTTTGG 2416356
Query 364478 CTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATA 364537
|||| | || ||| | | | || | ||| ||||| | || ||| | | |||| |
Sbjct 2416355 CTGATGCCTTCATGGTTTTAAGAATCGGATTCGATTCCCAAGAAGCTAGAGAATTAAACA 2416296
Query 364538 AGGAGATCTTTGAAACAATGTAT 364560
| || || ||||| || |||
Sbjct 2416295 TTCAAATTTTCGAAACTATCTAT 2416273
Score = 170 bits (188), Expect = 5e-37
Identities = 486/741 (66%), Gaps = 16/741 (2%)
Strand=Plus/Plus
Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278
|| |||||||| | | || ||||| ||| |||||| | ||| || ||| || ||
Sbjct 2539559 GCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAGAACTTGGTGGAAAACTTTTCAGCT 2539618
Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338
||| ||||| ||||| || | || |||||| || | ||||| ||||| ||||| ||
Sbjct 2539619 GAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTATGATGGAAAACATT 2539678
Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAA--GATAAAGACGAACAAC 22396
||| | ||||| || || | || | | ||| || | ||| | | |||
Sbjct 2539679 CACTCAGAAACTTACTCATTATTGATTGAA--ACTTATATCAAGGATCCAAAAGAAGCTG 2539736
Query 22397 GAAACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGC 22456
||||||| || ||| ||||||| | |||||| || ||||| ||||||||
Sbjct 2539737 ACTTCTTATTCAATGCTATTGAAACCATTCCACAAATTAAAAAGAAGGCTGATTGGGCCA 2539796
Query 22457 TGAAATGGATGAACAAT---GAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGG 22513
| | |||||| | || || | || || || | | |||| || |||| |
Sbjct 2539797 TCAGATGGATCCAAGATTCCGAGGCATTGTTTGCCGAGAGATTGGTTGCTTTCGCTGCTG 2539856
Query 22514 TTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAA 22573
||||||| || || || ||| ||||| | || || ||| | || ||| | |
Sbjct 2539857 TTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGGTTGAAGAAAAGAGGTT 2539916
Query 22574 TTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCG 22633
| ||||| || |||| || || || || |||||| | || || || ||| | || || |
Sbjct 2539917 TGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAGGTTTACACACTG 2539976
Query 22634 ATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAAACTGTAC 22693
| ||||| ||| | ||| | || || | |||| || || || || |
Sbjct 2539977 ACTTTGCATGTTTATTATTTGCCCATT-TACAA--CATAGAC---CAGATCCAAAGATCG 2540030
Query 22694 TTGATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGTTAC 22750
|||| | ||||||| | || |||||| ||||| ||| || || || ||||
Sbjct 2540031 TTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTACTGATGCTTTAC 2540090
Query 22751 CAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAG 22810
|||| ||| | | ||||| ||| ||| |||| || |||| || |||||||||| |
Sbjct 2540091 CAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTTGAATTTGTTGCTG 2540150
Query 22811 ATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAAT 22870
|| | |||| || | | ||| || ||| ||| || ||| ||||||||| || |
Sbjct 2540151 ATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTAATCCATTCGATT 2540210
Query 22871 GGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAAT 22930
|||||| ||||| | | || |||||||||||||| ||||| |||||| ||| |
Sbjct 2540211 TTATGGAAAACATTTCCTTGGCTGGTAAGACCAATTTCTTTGAAAAGAGAGTTTCTGATT 2540270
Query 22931 ACCAAAAAGCAGGTGTTATGG 22951
| |||||||| ||||||||||
Sbjct 2540271 ATCAAAAAGCTGGTGTTATGG 2540291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353466406256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |