Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 333 3e-86 seq4 113 6e-20 >seq1 Length=2936865 Score = 333 bits (368), Expect = 3e-86 Identities = 1426/2238 (64%), Gaps = 53/2238 (2%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||||||||| | ||| || |||| || || | | ||||||||| || || |||| Sbjct 2415629 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCAGTCTTTAAT 2415688 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || ||||||| ||||| |||||||| || | ||| | || || ||| Sbjct 2415689 CCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCTTGATA 2415748 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 ||||| || | ||||| |||||| ||||||||| |||| || | ||||| | ||| Sbjct 2415749 TGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATATCGATA 2415808 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 || |||||| | |||||||| | || || || | | ||||| || || || | Sbjct 2415809 ATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGGGGATA 2415868 Query 62090 TTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146 |||| | || ||||| ||| | || ||||| ||| |||| || |||| ||| Sbjct 2415869 TTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCATCGTTC 2415928 Query 62147 CATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62205 || ||| | || ||| | | | | | |||||||| | ||| ||||| || Sbjct 2415929 CA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAATTCACC 2415987 Query 62206 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 62265 || ||| ||||| | | ||| || || || || ||||| | | | ||||| || || Sbjct 2415988 AGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACC 2416047 Query 62266 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62325 ||||||||| | || || || || ||||| || |||||||| ||| ||||| | ||| Sbjct 2416048 CAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACC 2416107 Query 62326 GTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 62383 ||||| | | ||| | ||| | ||||||| ||| | || | || Sbjct 2416108 --ATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTTCTG 2416165 Query 62384 NNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTATC 62439 ||||| | ||| | | |||| | ||||| || || || Sbjct 2416166 TCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTG----ATCCTTGGTAGGTTTC 2416221 Query 62440 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 62499 || || ||||| | | || | |||| | || || | ||| ||| ||| || || Sbjct 2416222 ATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGATAGT 2416281 Query 62500 TTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATG-GATAATTTAAGA 62558 |||||| || | | |||| ||| ||||| || ||| ||| ||| || || | Sbjct 2416282 TTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAA-A 2416340 Query 62559 GAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 62618 || || || || || || ||||| || || | | || ||||| |||||| | |||| Sbjct 2416341 CCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAG 2416400 Query 62619 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62678 | | |||||||| || | || |||||||| | ||||| | | | || | || | Sbjct 2416401 ATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAG 2416460 Query 62679 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT----CAAATCGC-----CCATCTA 62729 || |||||| ||||| | || ||| ||| | | || || |||||| Sbjct 2416461 TAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTT 2416520 Query 62730 TT---ACAAAC-ATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 62785 | |||||| | | | || |||| ||||||| ||||| || || || || | | | Sbjct 2416521 GTTCAACAAACGAAGGT-AACGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGA 2416579 Query 62786 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 62845 | | |||| | || ||| || | || | | ||||| | |||||||| | Sbjct 2416580 GCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTC 2416639 Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905 || || ||| ||||||| ||||||||||| | |||||||| ||||||||||| | Sbjct 2416640 TGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTT 2416699 Query 62906 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT- 62964 |||| ||| | || | | ||| | | ||||||| || | ||| || | | Sbjct 2416700 TGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTT--TTTCTACCACGAC 2416757 Query 62965 -TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTC 63023 ||| ||||| ||| | ||||| | |||||||| || || | | ||| || Sbjct 2416758 CTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCGGCCAATC 2416817 Query 63024 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63083 | ||| ||||| ||| | | ||| | |||||| || | | | |||| ||||||| Sbjct 2416818 CTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAA 2416877 Query 63084 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63143 | | ||| |||||||| | || |||| |||||| | |||| ||| || || || Sbjct 2416878 ACAAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGT 2416937 Query 63144 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63203 |||||| | | || | ||| | | |||||| ||||| ||||| | || | | Sbjct 2416938 GGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAG 2416997 Query 63204 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63263 | | | | ||||| | ||||| || || ||||| | || | || ||||| || ||| Sbjct 2416998 CAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAAAA 2417057 Query 63264 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCAC 63323 | | | ||| || ||||||||||| || ||||| || || || | ||||| ||| Sbjct 2417058 CACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAG 2417117 Query 63324 TGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 63383 ||| |||||| || ||| | ||| || || || || | || || ||||| || | Sbjct 2417118 TGGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGCAC 2417177 Query 63384 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 63443 | |||||| || ||||| || || || ||| ||| || |||| || | |||| Sbjct 2417178 AAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAAC 2417237 Query 63444 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAA 63503 | |||||||| | ||| || |||||||| || ||||||| | ||||||| Sbjct 2417238 AAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCATGAGTAA 2417297 Query 63504 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT----ATATCCCATTGA 63559 | || ||| || | | || || || |||| ||| ||| ||||| | | | Sbjct 2417298 AGTATCTTTGCGACATCAAGTTATAAGTTTCAA----TGACTCTTGGGATATCTCTTCCA 2417353 Query 63560 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63619 || || || | || || | ||| | || ||||| ||||||||| | | || || Sbjct 2417354 TGTATACCGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTACCATTG 2417413 Query 63620 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 63677 || ||||| || ||| |||| |||||||| ||||||||||||||||| ||||| | Sbjct 2417414 ATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAA--T 2417471 Query 63678 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-CATG 63736 | || || || | ||| | ||||| | || ||| || | | || | ||| ||| Sbjct 2417472 CACGGTCATAGACAATTGCTGAGTTCAATTCATCAGCATTCTCTTGAATGATATCGTATG 2417531 Query 63737 GTAATAC-TTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAA 63795 | | | ||||||| || ||| || | ||| || |||| ||| | | | || Sbjct 2417532 TT--TCCTTTGAAATCATGGGAGCGTGAAGATTAGTTTCTGGGTTGATATATTCGTACAA 2417589 Query 63796 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 63855 ||| | || | | | | | ||| | |||| ||| || | ||| ||||| || || Sbjct 2417590 ATCTTTGGAAACCTGAGAATACAATTTAATGGTTTGTTTATGCAAATTGGATACCGCGAT 2417649 Query 63856 TCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 63915 || || || | | ||||| || || ||| || || ||| || || | || || Sbjct 2417650 CCTTGCTGCCAAGACAGCATAGTCTGGGTGTATGGTGGTCATAGTAGCAGCAGTCTCAGC 2417709 Query 63916 TGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 |||| | | ||||| || | ||||| ||||| | |||| || || || || Sbjct 2417710 AGCCAAATTATCCAACTCAATGGTTGTGACACCTTGGTATACACCAGCAATGACTTTTTG 2417769 Query 63976 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 64035 || || || || || | ||||| | || ||| ||||| |||||| || || | Sbjct 2417770 AGTAATAGCAACTGGTTCAACATGATTTGAGTCTAAACCATAGCATAATCTTTGAACTCT 2417829 Query 64036 AGATGTGATTTTATCAAA 64053 || |||||||| ||||| Sbjct 2417830 AGCAGTGATTTTGTCAAA 2417847 Score = 316 bits (350), Expect = 3e-81 Identities = 619/902 (69%), Gaps = 17/902 (2%) Strand=Plus/Minus Query 32349 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 32408 ||||| | |||||| || |||||| || ||| || | ||||| || ||||| || Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239 Query 32409 TTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAttttt 32468 ||||| | || || || |||||||| |||||||||||||| || ||||| |||| |||| Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179 Query 32469 ttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATT 32528 ||| ||||| || | |||||||| || |||||||| | |||| ||| | | Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119 Query 32529 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 32588 | ||||||||| || | | ||||||| | ||| |||||| ||||||| |||||| Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059 Query 32589 GAGACCGCGTCTGTTATAATAGATCTTACT--GTTTCTTCACTC-GGTGGATACAATAAA 32645 || || || || ||||| |||| | | | || || ||| || |||| Sbjct 2540058 TCAACAGCTTCAGTAATAAT---TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAA 2540002 Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705 || ||| | |||||||| || || ||||| ||| ||||| | || |||||||||| Sbjct 2540001 TGGGCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCG 2539942 Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765 ||||| || || | ||| ||||| | || | || || | ||| || || || |||||| Sbjct 2539941 TTGGAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAAT 2539882 Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACC 32824 || ||| || || || ||||| || || || || |||| | |||||| || | | Sbjct 2539881 GAACCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAAT 2539822 Query 32825 GGCGCTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 32881 | | | | || || ||||| || || |||||||| ||||||||||| | || || Sbjct 2539821 GCCTCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAAT 2539763 Query 32882 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 32941 || || |||||||| || | ||| ||| || ||| || | ||| || ||||| Sbjct 2539762 GGTTTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAAT 2539703 Query 32942 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCA 33001 ||| | || |||| || ||||||||||| || ||||| ||||||||||| | Sbjct 2539702 CAATAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGA 2539643 Query 33002 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 33061 | |||| || | ||| || ||||| | |||| ||| | || || ||||| || || Sbjct 2539642 TTTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAAT 2539583 Query 33062 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA-ATATTTTTCGTCTGGTG 33120 || || || ||||| || ||||| | | ||||| | | || | | || Sbjct 2539582 ACCATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGT- 2539524 Query 33121 TTAGTTTAT---TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 33177 ||| ||| | ||||||||| | ||||||| || ||| | |||||| ||||||| | Sbjct 2539523 TTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGA 2539464 Query 33178 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAA 33237 |||| ||||| || || || ||||| | |||||| ||||| ||| |||||||| || | Sbjct 2539463 ATGAAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGA 2539404 Query 33238 CA 33239 || Sbjct 2539403 CA 2539402 >seq4 Length=1591921 Score = 113 bits (124), Expect = 6e-20 Identities = 240/355 (68%), Gaps = 14/355 (4%) Strand=Plus/Minus Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020 ||||| |||| |||||||| ||| ||| |||||||| |||||| ||||||||| Sbjct 908394 TCTGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCCCTATCTGCAGCC 908336 Query 62021 ATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62080 || | |||||| ||| || || ||||| | ||| |||| | | || |||||| Sbjct 908335 ATATCTATAATATCCTTCTGCTTAAGCTCCCACACCGTTCTATATAATTCTTTGATATCT 908276 Query 62081 TCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62135 | || | | | ||| || |||| || || || || ||||| |||||| | | Sbjct 908275 TTGGGTATCACCGATATGTCTT--GAATCGAGCCGCCGTCCTGAATAATTCTATTCCTCA 908218 Query 62136 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA---CTCTAAGGAGATGCGGATTAACTA 62192 || | |||||||| | | | | ||| || | | ||||| | || || | Sbjct 908217 TCGCCGAATTCCATA---TACCCAAATCTGAAAGGTCTTTGATGAGATACTTGTTCACCA 908161 Query 62193 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAG 62252 |||| || || ||||| | ||||| || ||||| | ||| ||||||||||| | | Sbjct 908160 CTTGGAACTCGCCAGATATTACTCGACGTGTGTATAAATTGGACGTATACGGTTCAAAAC 908101 Query 62253 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62307 | ||||| ||||||||| |||| ||||| ||||| ||||| ||||| | ||| Sbjct 908100 ATTCATTGAATCCCAAAATCTGAGATGTTGAAGCAGTAGGCATGGGTGCTATCAA 908046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631936636800