Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 324 2e-83 >seq1 Length=2936865 Score = 324 bits (358), Expect = 2e-83 Identities = 635/923 (69%), Gaps = 33/923 (4%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||| || || |||| | |||||||||||||| ||||| || | Sbjct 2540290 CATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 2540231 Query 92850 CAAAGATATCGAATTCACTAGT---GATTGGATTCTTGGCGTTATAATACTTTTC----A 92902 ||| || || | ||| || || |||||| || | || ||| |||||| | Sbjct 2540230 CAAGGAAAT-GTTTTCCATAAAATCGAATGGATTAGTGACATTGTAA-ACTTTTTTATTA 2540173 Query 92903 CCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 || ||| | ||||||||||||||| |||||||| | || ||| |||| || | | Sbjct 2540172 CC---CAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTA 2540116 Query 92963 CAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACA 93022 |||||||| || | | || || |||| ||| || || ||||| ||||| || ||| || Sbjct 2540115 CAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCA 2540056 Query 93023 ACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACATAA 93079 || ||||| | || | |||| | | | | | ||||| |||| | ||| | || Sbjct 2540055 ACAGCTTCAGT-AATAATTCTTTCAA-CGA-TCTTTGGATCTGGTCTATGTTGTAAATGG 2539999 Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 | | ||| || |||||||| || |||||||||||||| || | || || || ||| Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| ||||| ||||| | || |||| |||||| | ||| || || || ||||| | Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG-- 93257 ||| ||||| |||||||| || || || || || || | | |||||||| || Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819 Query 93258 -CGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 |||||| || ||||||| | | |||||||| || || || ||||| || | Sbjct 2539818 TCGGAAT--CT-TGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATG 2539762 Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376 ||||| ||||| || |||| | | || || | | ||| || || || || || Sbjct 2539761 GTTTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATC 2539702 Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436 || | || || |||| || || | || ||||| ||||||||||||||||||| || Sbjct 2539701 AATAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGAT 2539642 Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 ||||||| | || || ||||| ||||| | || || | || ||||| || ||| Sbjct 2539641 TTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATA 2539582 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATAT--ATGCTTTATA-AAATGTTTCTCATCATCT 93553 ||||||||||| ||||| |||||||| || | | || | ||| || |||| ||| Sbjct 2539581 CCATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGT---TCATTATCG 2539525 Query 93554 TTAAGCTTATC---CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAA 93610 || | || || |||||| |||||||| | ||||| |||||| | ||||| Sbjct 2539524 TTTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAG 2539465 Query 93611 AACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670 || || || || ||||| |||||||| | ||| || || || ||| |||||||| ||| Sbjct 2539464 AATGAAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATG 2539405 Query 93671 ACAAAACGATTAGGGTTATCTTT 93693 ||| ||||| | ||| ||||| Sbjct 2539404 ACATAACGACGTGTGTTCTCTTT 2539382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860744313920