Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1 324 2e-83
>seq1
Length=2936865
Score = 324 bits (358), Expect = 2e-83
Identities = 635/923 (69%), Gaps = 33/923 (4%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| |||||| || || |||| | |||||||||||||| ||||| || |
Sbjct 2540290 CATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 2540231
Query 92850 CAAAGATATCGAATTCACTAGT---GATTGGATTCTTGGCGTTATAATACTTTTC----A 92902
||| || || | ||| || || |||||| || | || ||| |||||| |
Sbjct 2540230 CAAGGAAAT-GTTTTCCATAAAATCGAATGGATTAGTGACATTGTAA-ACTTTTTTATTA 2540173
Query 92903 CCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962
|| ||| | ||||||||||||||| |||||||| | || ||| |||| || | |
Sbjct 2540172 CC---CAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTA 2540116
Query 92963 CAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACA 93022
|||||||| || | | || || |||| ||| || || ||||| ||||| || ||| ||
Sbjct 2540115 CAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCA 2540056
Query 93023 ACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACATAA 93079
|| ||||| | || | |||| | | | | | ||||| |||| | ||| | ||
Sbjct 2540055 ACAGCTTCAGT-AATAATTCTTTCAA-CGA-TCTTTGGATCTGGTCTATGTTGTAAATGG 2539999
Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139
| | ||| || |||||||| || |||||||||||||| || | || || || |||
Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939
Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199
||| ||||| ||||| | || |||| |||||| | ||| || || || ||||| |
Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879
Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG-- 93257
||| ||||| |||||||| || || || || || || | | |||||||| ||
Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819
Query 93258 -CGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316
|||||| || ||||||| | | |||||||| || || || ||||| || |
Sbjct 2539818 TCGGAAT--CT-TGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATG 2539762
Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376
||||| ||||| || |||| | | || || | | ||| || || || || ||
Sbjct 2539761 GTTTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATC 2539702
Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436
|| | || || |||| || || | || ||||| ||||||||||||||||||| ||
Sbjct 2539701 AATAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGAT 2539642
Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496
||||||| | || || ||||| ||||| | || || | || ||||| || |||
Sbjct 2539641 TTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATA 2539582
Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATAT--ATGCTTTATA-AAATGTTTCTCATCATCT 93553
||||||||||| ||||| |||||||| || | | || | ||| || |||| |||
Sbjct 2539581 CCATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGT---TCATTATCG 2539525
Query 93554 TTAAGCTTATC---CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAA 93610
|| | || || |||||| |||||||| | ||||| |||||| | |||||
Sbjct 2539524 TTTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAG 2539465
Query 93611 AACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670
|| || || || ||||| |||||||| | ||| || || || ||| |||||||| |||
Sbjct 2539464 AATGAAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATG 2539405
Query 93671 ACAAAACGATTAGGGTTATCTTT 93693
||| ||||| | ||| |||||
Sbjct 2539404 ACATAACGACGTGTGTTCTCTTT 2539382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860744313920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |