Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 295 8e-75 seq2 100 4e-16 seq4 95.1 2e-14 >seq1 Length=2936865 Score = 295 bits (326), Expect = 8e-75 Identities = 836/1276 (66%), Gaps = 25/1276 (2%) Strand=Plus/Minus Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 || || |||||||| |||| ||| |||||||| ||||||| | |||||| || || Sbjct 2417274 TTTAATGCTGGTACTCCAAAACCACAAATGTCATCTTGTTTCTTGGTTGCAATGAAAGAA 2417215 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 ||||| || | || ||||| | ||| | | ||||| ||| |||||| | ||| Sbjct 2417214 GATTCTATTGAAGGTATTTATGACACCTTAAAAACTTGTGCTTTAATTTCAAAGAGTGCT 2417155 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTAC 111907 |||||||| || ||||||| || | | | || || || || |||| ||||| Sbjct 2417154 GGTGGTATTGGTTTGCACATTCACAACATTCGTTCC-ACTGGTGCTTATATTGCTGGTAC 2417096 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||| ||| || |||||||||| || ||| |||| || || ||| ||| || || || Sbjct 2417095 AAACGGTACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACACTGCCCGTTA 2417036 Query 111968 TGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATG 112021 ||| | |||| || || |||| || || | || | |||||||| ||||| Sbjct 2417035 TGTTGATCAAGGTG---GTAACAAGAGACCTGGTGCTTTTGCTTTGTATCTTGAACCATG 2416979 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||| |||||| | || ||| ||||| | | ||||| ||| | || || | Sbjct 2416978 GCACAGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGAAATTAG 2416919 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 | ||| | ||| | || | |||||||||||| | || |||||||||||||| | Sbjct 2416918 AGCTAGAGATTTATTCCCGGCCTTGTGGATTCCAGATTTGTTTATGAAGAGAGTTGAACA 2416859 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | ||| | ||| | | || | |||| | | || || || | |||| | || Sbjct 2416858 AAATGGTGAGTGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCCGACACTTATGG 2416799 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261 ||| ||||||| | | ||| ||| || || ||| |||| | | || | Sbjct 2416798 TGACGAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAAAACCAT 2416739 Query 112262 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 112321 ||| | ||||| | | || | | |||||||||| |||||||| |||| Sbjct 2416738 CAAGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGTACCCCATT 2416679 Query 112322 TATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 112381 ||| | || || || || |||||| ||| || || |||||||| ||| | ||||| Sbjct 2416678 CATGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAGAAGAATTTAGGTATTATCAA 2416619 Query 112382 GAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 112441 ||||||| | ||| ||||| | |||| ||| ||| || ||||| || Sbjct 2416618 ATCTTCCAACTTGTGTTGTGAAATTGTCGAATACTCAGCTCCAGACGAAGTTGCTGTCTG 2416559 Query 112442 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG--- 112497 |||| | ||||| || || | || || ||| || | ||| | ||| || ||| Sbjct 2416558 TAACTTGGCATCGATTGCGTTACCTTCGTTTGTTGAACAAGATGGTAAACACGCTTGGTA 2416499 Query 112498 --ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 | | ||| || | || || ||||| ||| ||| || ||| | |||||||| || Sbjct 2416498 CAACTTTGACAAGTTGCATGATGTTACCAAAGTTGTTACTCGTAACTTGAACAGAGTCAT 2416439 Query 112556 TGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 || || |||| |||||| || ||| ||| |||||||| ||||||||| | || Sbjct 2416438 AGACAGGAATTATTACCCAGTCCCTGA---AGCTGAGAAATCTAACATGAGACACAGACC 2416382 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 112672 ||||| | || ||||||||| | || |||| ||||| ||| | || ||| || Sbjct 2416381 AATTGCATTGGGAGTCCAAGGTTTGGCTGATGCCTTCATGGTTTTAAGAATCGGATTCGA 2416322 Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732 |||| | ||||| | ||| | || | || || || || || |||||||| ||| | Sbjct 2416321 TTCCCAAGAAGCTAGAGAATTAAACATTCAAATTTTCGAAACTATCTATCACGCTGCTGT 2416262 Query 112733 TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792 ||| || | || |||||| | | || ||||| |||||||||| | || || || Sbjct 2416261 TGAAGCTTCTATTGAATTGGCACAAGAAGAAGGTCCTTATGAAACCTACCAAGGATCACC 2416202 Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACTACG 112851 ||| || ||||| || | |||| ||| ||||||| | || | | || | | | | Sbjct 2416201 AGCATCCCAAGGTTTGTTACAATATGACTTGTGGGACAGAAAGCCTACAGAATTA-TGGG 2416143 Query 112852 ACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 112911 | ||||| | | || || | | | ||| | | ||| | | ||| ||| Sbjct 2416142 ATTGGGATGAATTGAAAAAAAAACTTGCCAAACATGGTATGAGAAACTCTTTGTTGGTGG 2416083 Query 112912 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 112971 | ||||||||||| || ||||| ||||||| |||||||| |||||||| |||||||| | Sbjct 2416082 CTCCAATGCCAACCGCTTCCACATCACAAATTTTGGGTAACAATGAATGTTTTGAACCAT 2416023 Query 112972 ACACGACGAACATCTA 112987 |||| |||||||||| Sbjct 2416022 ACACTTCGAACATCTA 2416007 >seq2 Length=2433673 Score = 100 bits (110), Expect = 4e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 |||||| ||||| || ||||| || ||||| ||||| ||||| || || | ||||| Sbjct 2123211 CTATGGACGTGTAGCTCCACGTTCAGGTCTTGCTGTCAAACATGGAATTTCAACCGGTGC 2123152 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGA 163665 || || |||||| | || ||| ||||||||| ||||| || | || |||||| ||| Sbjct 2123151 TGGGGTAATTGATGCTGATTACCGGGGTGAAGTTAAAGTTGTCTTGTTTAATCATTCAGA 2123092 Query 163666 CAAAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTGAGAGGTGTGA 163725 ||| | ||||| | || | ||| || | || || ||| | ||| | || || || Sbjct 2123091 TAAACATTTTGAAATTAAAAAGGGAGATAGAATTGCTCAATTAGTTTTGGAAAGAATTGT 2123032 Query 163726 GACACCCGATGTGGAGGAAATTG 163748 | ||||| |||||||||||| Sbjct 2123031 AAATGCCGATTTGGAGGAAATTG 2123009 >seq4 Length=1591921 Score = 95.1 bits (104), Expect = 2e-14 Identities = 269/406 (66%), Gaps = 8/406 (2%) Strand=Plus/Plus Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946 |||||| | |||||| | | | || | ||| | |||||| ||||| || | || Sbjct 1370407 ATCAAATCTACCTGGTCTCAATAATGCTTTATCCAAAATATCAGGACGATTAGTACCAGC 1370466 Query 15947 GATGACAACAATACCTGTTTCGT--TATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 | |||||| | | || | || ||||||| |||||||| || ||| | ||||| Sbjct 1370467 CAAGACAACCACA--TGATCAGTAGTATCAAATCCATCCATTTCAACCAACAATTGGTTC 1370524 Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACG 16064 | || | ||| || || ||||| | ||||| |||| || | || || || | | Sbjct 1370525 AAGGTGTTTTCACGCTCGTCATTTCCGCCCATACGACCATTACCTCTTTCTTTACCGATG 1370584 Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC-GACTTCAAAGAG 16123 |||||||| ||||||| || | ||| ||| | || | || | ||| || | Sbjct 1370585 GCATCAATTTCATCAACAAAAATGATTGCTGGAGCCATATCTCTTGCTGTCTTGAACAA- 1370643 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG-AAC 16182 ||| |||||||| || || |||||||||||||| || || || | || ||| ||| Sbjct 1370644 ATCACGTACACGAGATGCACCAACACCAACAAACATTTCAACGAATTCTGAACCGGAAAC 1370703 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 | | | ||| || ||| || |||||| ||| ||||| || | | |||||||| | Sbjct 1370704 ACT-AAGGAATGGTACACCAGCTTCACCGGCAGTGGCTTTAGCTAACAAGGTCTTACCTG 1370762 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 |||| || |||| | || ||||| || ||||| ||||| || Sbjct 1370763 TACCCGGAGGTCCCGATAAGATTGCACCACGAGGAATTTTGGCACC 1370808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742337925760