Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 176 5e-39 >seq1 Length=2936865 Score = 176 bits (194), Expect = 5e-39 Identities = 608/943 (64%), Gaps = 13/943 (1%) Strand=Plus/Plus Query 110287 GCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCC 110346 ||||| || || | || || |||| | |||||| | | |||||| | |||||| Sbjct 2416541 GCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGCTGAGTATTCGACAATTTCA 2416600 Query 110347 GTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCAT 110406 ||||||||||||| || || | ||| || |||||||| || || |||| ||| || Sbjct 2416601 CAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTCTGGTTGGACTTGGTGTTACAA 2416660 Query 110407 GCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTC 110466 ||||||||||| | |||| |||||||||||||||| || || | | | |||| | | Sbjct 2416661 GCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATGGAGTAC 2416720 Query 110467 CATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTAC 110526 || | | || || ||| || | |||||||| || || || |||| Sbjct 2416721 CACAACTTTTGAGCCTTGATGGTTTTTCTACCACGACCTTCCCTTTCATATTTTTCGTAC 2416780 Query 110527 AAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAG 110586 || || |||| || | || || || | | || || | | ||| |||| Sbjct 2416781 AACTCAACAAACTCGTCACCATAAGTGTCGGCCAATCCTGGAGCTTCATTTGGAGAGAAC 2416840 Query 110587 AGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCC 110646 | | ||| | ||| | ||||| |||||||| |||| || |||||||||| ||| Sbjct 2416841 AATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAACAAATCTGGAATCCACAAGGCC 2416900 Query 110647 GAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAG 110706 | ||| | || | | | ||||| | ||| ||||| | | ||| | || Sbjct 2416901 GGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTGATCTCAATGAAA 2416960 Query 110707 TCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA------TGGATCCCTTACGA 110760 || | |||||| |||||||||||| ||||| | ||| | | || ||| | Sbjct 2416961 TCAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACCAGGTCTCTTGTTA 2417020 Query 110761 CGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATT 110820 | || | || | |||||| || || ||| ||||| || | | |||||| ||||| Sbjct 2417021 CCAC---CTTGATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCATAGGGATAATA 2417077 Query 110821 CCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGGAT 110879 |||| || ||| |||||||| ||| | | || | ||| |||||||| ||| || Sbjct 2417078 CCATTAGAAGTACCGTTTGTACCAGCAATATAAGCAC-CAGTGGAACGAATGTTGTGAAT 2417136 Query 110880 ATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATA 110939 |||| |||||||||||| || | ||| |||| ||||| | | | || |||| Sbjct 2417137 GTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGCACAAGTTTTTAAGGTGTCATA 2417196 Query 110940 AATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACG 110999 |||||| ||||| |||||| | || | |||| | || ||||| ||||| || || Sbjct 2417197 AATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTT 2417256 Query 111000 AGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTT 111059 || || || ||||| || | ||| | ||||| | || | ||| |||||| Sbjct 2417257 TGGAGTACCAGCATTAAACAAACAAGGAGAACCATGAGTAAAGTATCTTTGCGACATCAA 2417316 Query 111060 GTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCAT 111119 ||| || || || | | || | |||| | || || ||||| || ||||||| ||| Sbjct 2417317 GTTATAAGTTTCAATGACTCTTGGGATATCTCTTCCATGTATACCGATAGCAACTCTCAT 2417376 Query 111120 GAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTA-ACTCTTCT 111178 | || || || || |||| || || |||| | ||| | || |||| | Sbjct 2417377 AATCAAATGCTGTGGTCTTTCAGCTACTTTACCATTGATACGTAACAAATATGATCTT-T 2417435 Query 111179 CTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||| || |||| |||||| || ||| ||||||||| || Sbjct 2417436 CTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAATCACGGTC 2417478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975941102400