Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 389 4e-103
seq4 113 5e-20
>seq1
Length=2936865
Score = 389 bits (430), Expect = 4e-103
Identities = 640/915 (70%), Gaps = 15/915 (2%)
Strand=Plus/Minus
Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728
||||||||| || | |||||| |||||||||||||| || || || | || || ||
Sbjct 2540278 TTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAAATGTT 2540219
Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788
|||||||||||| |||||||| | ||||| || | |||||| || || | | |
Sbjct 2540218 TTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTTTATTACCCAAAGCAACCAA 2540159
Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848
|| |||||| || ||||||| || |||| ||| | | ||||||||| || | |||
Sbjct 2540158 TAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCCAATAA 2540099
Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
|||| |||| ||||| |||| ||||||| ||| || | || || || | |||||
Sbjct 2540098 ACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAATAAT 2540039
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| |||| | | | || || | | | | ||| ||| | |||||||||||
Sbjct 2540038 TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGGGCAAATAATAAACATGCAAA 2539979
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
||| |||| || ||||| | || || ||||| || || || ||||| || |||||
Sbjct 2539978 GTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAATCCTGGCAT 2539919
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
|| |||||||| || |||||||| ||||| |||||||| ||| || || ||||||||
Sbjct 2539918 CAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAGATACCTTC 2539859
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCATT 19147
|| || || |||||||| | ||| || || ||| | || || || || ||||||
Sbjct 2539858 AACAGCAGCGAAAGCAACCAATCTCTCGGCA-AACAATGCCTCGGAATCTTGGATCCATC 2539800
Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207
| | |||||||||||||||||||| | ||| || || || |||| ||| |||| |
Sbjct 2539799 TGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCATTGAATA-AG 2539741
Query 19208 ACATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266
| | || || | || ||| || | ||| | || |||||||| ||| |||||||
Sbjct 2539740 AAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGAGTAAGTTTCTGAG 2539681
Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326
||||| ||||| || || || |||||||| ||| || | ||||||| || || |||
Sbjct 2539680 TGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAATTTGAACT 2539621
Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386
||| |||| |||| ||||| || |||||||| || ||||| || ||||| ||
Sbjct 2539620 TCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGATGCGGCAAAGAAA 2539561
Query 19387 GCTAATACATGTT----TAATAAAATGTTTTTCATCTGAGGTTAATGTAT---TCCAATC 19439
|| || | | || ||| ||| ||| | ||| | ||||| | | |||||||
Sbjct 2539560 GCCAAGA-TTCTTCCGATAAAGAAACGTTCATTATC---GTTTAATTTTTCTCTCCAATC 2539505
Query 19440 ATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTT 19499
|| || ||||||| |||||| | ||||||| ||||||| || |||||||| ||||| ||
Sbjct 2539504 ATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGCTTTCTT 2539445
Query 19500 ATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559
||||| | ||| || ||| | ||| || ||||| || ||| | | | | | || ||
Sbjct 2539444 GTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATAACGACGTGTGTTCTC 2539385
Query 19560 TTTAAGAATAGGTTC 19574
||| | || |||||
Sbjct 2539384 TTTCAAAAGTGGTTC 2539370
Score = 325 bits (360), Expect = 4e-84
Identities = 1169/1827 (64%), Gaps = 39/1827 (2%)
Strand=Plus/Plus
Query 47009 TTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT 47068
|| ||||| ||||| ||||||||||||||||| ||| |||||||||| || |||||
Sbjct 2415655 TTGTGTTCTCAAATAGTACATACCAGTCTTTAATCCTTTCTTCCATCCATAAAAGTGCAT 2415714
Query 47069 ACTAGTTAATTTAGA-ATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGAT 47127
||| || |||||| || | ||| || | |||| || || | ||||| ||||
Sbjct 2415715 ACTTGTCAATTTACCCATTGTTGGGTCCTTGA-TATGGATGTTTAATGATTGTGATTGAT 2415773
Query 47128 CAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATA 47187
|||| || || | ||||||| |||||||| | |||| | |||| | || ||||| |
Sbjct 2415774 CAATGAAGGCTGCCCTATCAGAGGCCATATCGATAATATGCTTTTGAGAGATTTCCCACA 2415833
Query 47188 CTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAGT---ATTTTGAATAGATCCTC 47244
|||| || || | | |||||| || || |||| ||| | | ||| || || ||
Sbjct 2415834 CTGTCTTGTACAATGCTTTAATTTCATCGGGGATATTTGGCAAAGCTTGGATGGAACCAT 2415893
Query 47245 Cgttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaatgttt 47304
|||| ||||| | | || | ||| ||||| ||| || |
Sbjct 2415894 TGTTTGAAATAATACTACTCTTCATAGCATCGTTCCAAATACCCAAATCAACCAAATCCT 2415953
Query 47305 ttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATAT 47364
| || | | |||||||||||||| ||||| |||| | ||||| | | || || |
Sbjct 2415954 TCAACAAGTATGGATTAACAATTTGGAATTCACCAGCCAACACTCTTCTGGAGTAGATGT 2416013
Query 47365 TACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAG 47424
| || |||||||| | | ||||||| || || |||||||| | || || || || |
Sbjct 2416014 TCGAAGTGTATGGTTCAAAACATTCATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTG 2416073
Query 47425 GCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNN 47484
|||| | || || || || ||||| | |||| ||| | |
Sbjct 2416074 GCATTGGAGCCACCAACAAAGAGTTTCTCATACCATGTTTGGCAAGTTTTTTTTTCAATT 2416133
Query 47485 GTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTT 47544
| ||||||||| | |||| || | ||| || |||||||| | | ||||
Sbjct 2416134 CATCCCAATCCCATAATTCTGTAGGCTTTCTGTCCCACAAGTCATATTGTAACAAACCTT 2416193
Query 47545 TACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAAC 47604
| || || || | || |||| ||||||||| | | || || | |||| |
Sbjct 2416194 GGGATGCTGGTGATCCTTGGTAGGTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAG 2416253
Query 47605 TTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTC-CTTGCT 47663
||||| | ||| | ||| || ||||| || |||| ||||||| |||| || |||
Sbjct 2416254 AAGCTTCAACAGCAGCGTGATAGATAGTTTCGAAAATTTGAATGTTTA-ATTCTCTAGCT 2416312
Query 47664 TCTGATGATTCAAAAG-GATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACC 47722
||| || || || ||| || | ||| ||||| ||||| || ||
Sbjct 2416313 TCTTGGGAATCGAATCCGAT-TCTTAAAACCATGAAGGCATCAGCCAAACCTTGGACTCC 2416371
Query 47723 AATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTT 47782
| |||||||||| || | | ||||| ||||||||| || | ||| || | ||
Sbjct 2416372 CAATGCAATTGGTCTGTGTCTCATGTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATT 2416431
Query 47783 TATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATT 47842
| ||||| | | | || | || || || || |
Sbjct 2416432 CCTGTCTATGACTCTGTTCAAGTTACGAGTAACAACTTTGGTAACATCATGCAACTTGTC 2416491
Query 47843 AAAAT-----CAAACTTGTT----AT-TTAT--AACAAACCTATTAAGTGCTATAGATGC 47890
||| | ||| | |||| || || | ||||||| | | || || |||||
Sbjct 2416492 AAAGTTGTACCAAGCGTGTTTACCATCTTGTTCAACAAACGAAGGTAACGCAATCGATGC 2416551
Query 47891 TAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATT 47950
| ||||| ||||| || || | |||| | |||| | |||||| ||| | ||
Sbjct 2416552 CAAGTTACAGACAGCAACTTCGTCTGGAGCTGAGTATTCGACAATTTCACAACACAAGTT 2416611
Query 47951 ACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTA 48010
| |||||||| |||| ||||| | || || ||||||| || ||||| ||
Sbjct 2416612 GGAAGATTTGATAATACCTAAATTCTTCTGGTTGGACTTGGTGTTACAAGCATCCTTATA 2416671
Query 48011 AAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCT 48070
| ||| || || || |||||||| | |||| ||| | ||| || | ||| | |
Sbjct 2416672 CAACATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTG 2416731
Query 48071 AGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAA 48130
|||||| || |||| | | || ||| ||||| || |||| ||||
Sbjct 2416732 AGCCTTGATGGTTTTTCTACCACGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAA 2416791
Query 48131 TTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATC 48190
|| || ||||| | | || || ||| |||||| ||| | | ||||| |||
Sbjct 2416792 CTCGTCACCATAAGTGTCGGCCAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCA--- 2416848
Query 48191 CTCATCATTTTTT---ACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAA 48247
|||| |||||| | ||||| ||||||| | |||||| ||||| | || |||||
Sbjct 2416849 CTCACCATTTTGTTCAACTCTCTTCATAAACAAATCTGGAATCCACAAGGCCGGGAATAA 2416908
Query 48248 ATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTAT 48307
||| |||| ||| | |||||| || || ||| || | | |||| || || | ||
Sbjct 2416909 ATCTCTAGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGAT 2416968
Query 48308 ATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTG 48367
|||| ||||||||||| | ||| | || | |||| |||| || ||||| |||||
Sbjct 2416969 ATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACCAGGTCTCTTGTTACCACCTTG 2417028
Query 48368 ATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATAT 48427
||| | ||| | |||||| ||||| |||| | | ||| |||| ||||||||| || |
Sbjct 2417029 ATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCATAGGGATAATACCATTAGAAGT 2417088
Query 48428 ACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTA 48486
||| || || || | ||||||| ||| | | | || || ||| || || ||| |
Sbjct 2417089 ACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGAATGTTGTGAATGTGCAA-ACCAA 2417147
Query 48487 TACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTA 48546
||||||| || | || || |||| |||||| ||| | ||| |||||||| ||||| |
Sbjct 2417148 TACCACCAGCACTCTTTGAAATTAAAGCACAAGTTTTTAAGGTGTCATAAATACCTTCAA 2417207
Query 48547 TACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTG 48606
|| ||| ||| |||| | | |||||| |||||||| || | ||| || |
Sbjct 2417208 TAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGGAGTACCAG 2417267
Query 48607 AATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTT 48666
|||||| || ||||| ||||| |||| || | | || | ||| ||||| ||||
Sbjct 2417268 CATTAAACAAACAAGGAGAACCATGAGTAAAGTATCTTTGCGACATCAAGTTATAAGTTT 2417327
Query 48667 CAATAACAGAATCT----ATATCCCATTGATGTATACCTATAGATACACGCATTAACATA 48722
|||| || ||| ||||| | | ||||||||| |||| || | ||| | || |
Sbjct 2417328 CAAT----GACTCTTGGGATATCTCTTCCATGTATACCGATAGCAACTCTCATAATCAAA 2417383
Query 48723 TATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTT 48782
| || ||||||||| | | ||| ||| || || | ||||||| |||| || |||
Sbjct 2417384 TGCTGTGGTCTTTCAGCTACTTTACCATTGATACGTAACAAATATGATCTTTCTAAAGTT 2417443
Query 48783 TTAAAACCAAAATAGTTGTA--TGAAA 48807
|| ||||||||||||||||| |||||
Sbjct 2417444 TTGAAACCAAAATAGTTGTAATTGAAA 2417470
>seq4
Length=1591921
Score = 113 bits (124), Expect = 5e-20
Identities = 185/261 (71%), Gaps = 8/261 (3%)
Strand=Plus/Minus
Query 48180 AATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCT 48239
|| |||||||| || | ||| ||||| ||| || | |||||| ||||| | | |
Sbjct 907294 AACGACCAATCATCTCCTGATTTCACTCTTTGCATGAACAAATCTGGAATCCATA-ACCC 907236
Query 48240 ATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCC---ACTATTCCTTTTAAGTTCAAG 48295
||| || ||||| ||||||| |||||||||||||| | | ||||| || |||||
Sbjct 907235 ATAGAACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTCCTCATA--TTCAA- 907179
Query 48296 AAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTT 48355
|| ||| | || ||||||||||| ||||| | ||| ||||| | | | ||||||| |||
Sbjct 907178 AATGTCAAAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCTCCTGGTCTTTT 907119
Query 48356 ATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAAT 48415
|| ||||| || | ||||| || || ||||| |||| | ||||| || || |
Sbjct 907118 TCCTCCGCCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAACATGGGAACTAC 907059
Query 48416 ACCATTTGATATACCATTGGT 48436
||| ||| | ||||| ||
Sbjct 907058 CCCACCAGATCTCCCATTAGT 907038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108743789120
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