Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1 235 6e-57 >seq1 Length=2936865 Score = 235 bits (260), Expect = 6e-57 Identities = 554/832 (67%), Gaps = 11/832 (1%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || ||||||||| || ||||| |||| || ||||| ||||| || | Sbjct 2540290 CATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 2540231 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA---TAGTACTACA 36988 | || || |||||||||||||| |||||||||| ||| || | | || ||| Sbjct 2540230 CAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTTTATTACC 2540171 Query 36989 TGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATA 37048 || | || | ||||| ||||||||||| | |||| |||||||| || | | Sbjct 2540170 C---AAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACA 2540114 Query 37049 GTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTAC 37108 || ||||| | || | ||||| | ||||| || ||| |||||| ||| || Sbjct 2540113 ATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAAC 2540054 Query 37109 AGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAA 37168 ||| || ||| || | ||| | | | | ||| || || ||||| ||| Sbjct 2540053 AGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGGGCAAA 2539994 Query 37169 CAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAA 37228 |||||||||||||| ||| ||||||||||| || | || || ||||| || || || Sbjct 2539993 TAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAA 2539934 Query 37229 GGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGA 37288 |||||||||||||| ||||||||||| || | ||| || || | |||||| || ||| Sbjct 2539933 AGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACT 2539874 Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATA 37348 || || ||||||||||| || || || || || | | | || || | Sbjct 2539873 GAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGA 2539814 Query 37349 ATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAAT 37408 ||| |||||| | | | |||||| ||||| ||||| | ||| |||||||| Sbjct 2539813 ATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAAT 2539754 Query 37409 TGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACT 37468 || || || | |||| ||||| ||| | |||||||| ||||| | ||| Sbjct 2539753 AGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGA 2539694 Query 37469 ATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTC 37528 || |||| |||||||| ||||| || || || || || || ||| | ||||||| Sbjct 2539693 GTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTC 2539634 Query 37529 AGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACT 37588 | | |||||| || |||| | | | ||||| |||||||| || ||||| Sbjct 2539633 TGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGA 2539574 Query 37589 AGCTGCAAAGAAAG-CAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTT 37647 || |||||||||| ||||| | | ||||| | ||||| || |||||||| Sbjct 2539573 TGCGGCAAAGAAAGCCAAGATTCT-TCCGATAAAGAAACGTTCATTATCGTTTAATTTTT 2539515 Query 37648 ---TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 ||||||||| || |||||| |||||| | ||| ||| | ||||| || Sbjct 2539514 CTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAA 2539463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316740768320