Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1 235 6e-57
>seq1
Length=2936865
Score = 235 bits (260), Expect = 6e-57
Identities = 554/832 (67%), Gaps = 11/832 (1%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
|||||| || ||||||||| || ||||| |||| || ||||| ||||| || |
Sbjct 2540290 CATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 2540231
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA---TAGTACTACA 36988
| || || |||||||||||||| |||||||||| ||| || | | || |||
Sbjct 2540230 CAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTTTATTACC 2540171
Query 36989 TGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATA 37048
|| | || | ||||| ||||||||||| | |||| |||||||| || | |
Sbjct 2540170 C---AAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACA 2540114
Query 37049 GTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTAC 37108
|| ||||| | || | ||||| | ||||| || ||| |||||| ||| ||
Sbjct 2540113 ATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAAC 2540054
Query 37109 AGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAA 37168
||| || ||| || | ||| | | | | ||| || || ||||| |||
Sbjct 2540053 AGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGGGCAAA 2539994
Query 37169 CAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAA 37228
|||||||||||||| ||| ||||||||||| || | || || ||||| || || ||
Sbjct 2539993 TAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAA 2539934
Query 37229 GGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGA 37288
|||||||||||||| ||||||||||| || | ||| || || | |||||| || |||
Sbjct 2539933 AGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACT 2539874
Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATA 37348
|| || ||||||||||| || || || || || | | | || || |
Sbjct 2539873 GAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGA 2539814
Query 37349 ATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAAT 37408
||| |||||| | | | |||||| ||||| ||||| | ||| ||||||||
Sbjct 2539813 ATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAAT 2539754
Query 37409 TGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACT 37468
|| || || | |||| ||||| ||| | |||||||| ||||| | |||
Sbjct 2539753 AGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGA 2539694
Query 37469 ATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTC 37528
|| |||| |||||||| ||||| || || || || || || ||| | |||||||
Sbjct 2539693 GTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTC 2539634
Query 37529 AGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACT 37588
| | |||||| || |||| | | | ||||| |||||||| || |||||
Sbjct 2539633 TGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGA 2539574
Query 37589 AGCTGCAAAGAAAG-CAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTT 37647
|| |||||||||| ||||| | | ||||| | ||||| || ||||||||
Sbjct 2539573 TGCGGCAAAGAAAGCCAAGATTCT-TCCGATAAAGAAACGTTCATTATCGTTTAATTTTT 2539515
Query 37648 ---TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696
||||||||| || |||||| |||||| | ||| ||| | ||||| ||
Sbjct 2539514 CTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAA 2539463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592316740768320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |