Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq1 233 1e-56
seq4 158 6e-34
>seq1
Length=2936865
Score = 233 bits (258), Expect = 1e-56
Identities = 994/1539 (65%), Gaps = 65/1539 (4%)
Strand=Plus/Plus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
||||| |||| ||| |||||||| | | ||| |||||| |||||||||||||||||
Sbjct 2415980 AATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCA 2416039
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
|| || || || ||||| || || || || ||||||||| || | || | || |||
Sbjct 2416040 TTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTT 2416099
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAAC 25195
|||| ||||| ||| ||| | || ||| |||| ||||||||| | | ||| | ||
Sbjct 2416100 CTCATACCATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCA-TAATTCTGTAG- 2416157
Query 25196 TCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGATTGATCA 25255
| | || | || | || ||| |||||||||| || | ||| || ||| |
Sbjct 2416158 --GCTTTC--TGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGG 2416213
Query 25256 AAAGTTGAATATTTACCTTTTGTTATTGCCATATCTTTTGATTGCTCTAAC-GCAGCATA 25314
| ||| ||| ||||| | | ||||| || | || ||| ||| ||||| |
Sbjct 2416214 TAGGTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAA-GCTTCAACAGCAGCGTG 2416272
Query 25315 ATACATATTTTCAAAAATCGCTTTGTTTAAAAACTTAGCTTTTTCTCCATCGAAAGCAAT 25374
||| ||| |||| ||||| ||||||| |||||| || |||||| | ||
Sbjct 2416273 ATAGATAGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGAT 2416332
Query 25375 TTCCATTAAGGC--GAACGTATCTGCTAATCCCTGAACTCCTAATCCAACTGGACGATGT 25432
| | | || | ||| | ||| || || || || ||||| ||| ||| ||| | |||
Sbjct 2416333 T--CTTAAAACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGT 2416390
Query 25433 TTATTATTACTTATCTCAGTTTCTGATGTTGGATAGAAATTTGTATCGATCACATTATCT 25492
| | ||| | |||||| ||| | ||| || |||| | || || || | |
Sbjct 2416391 CTCATGTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTC 2416450
Query 25493 AGATTCTTTATGGCAAGCTTTGTGTATTTTCT--CAACTCAATAAAGTCAAAATAAGGCT 25550
| || | ||| ||||| ||| || ||||| ||||| | ||| |
Sbjct 2416451 AAGTTACGAGTAACAA-CTTTG-GTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGT 2416508
Query 25551 TATCGTTTAT-ATCTCTTTTTACAAATTTAGATAAAGCGATTGATGCTAAATTACAAACA 25609
||||| |||| || ||||| || ||| || || ||||| || ||||| |||
Sbjct 2416509 ----GTTTACCATCTTGTTCAACAAACGAAGGTAACGCAATCGATGCCAAGTTACAGACA 2416564
Query 25610 GCTTGTTCTTTCCCGTCAGAATATTCATTGATCTCGATACATAAGTTGCTAGATTTGATT 25669
|| ||| | | || ||||| || || ||| |||||| |||||||||
Sbjct 2416565 GCAACTTCGTCTGGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATA 2416624
Query 25670 ACTCCATAATTCTTTTGATTA---TTGCATGTATTGACAAT-ATCTTTATATCCTAAAT- 25724
| || ||||||| || || ||| || || |||| ||| ||||| | | ||
Sbjct 2416625 ATACCTAAATTCTTCTGGTTGGACTTG---GTGTT-ACAAGCATCCTTATA--CAACATG 2416678
Query 25725 -ATGGCGTTCCTGTTTCAATTTGAGATACTAAAATTTTCTCCCAAAGTTCTCTCGCTTTT 25783
|||| || || ||||| |||||| | | || || | ||| | | | || ||
Sbjct 2416679 AATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTG 2416738
Query 25784 AC--TTTCTTTACGAAGTTACCATCAGAAACAGCTCTTTCGTAAAGTTCAACAAATTCTT 25841
| ||| | ||| | | ||| || || | ||||||| | |||||||| || |
Sbjct 2416739 ATGGTTTTTCTACCACG--ACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGT 2416796
Query 25842 GATTTATTTTCTCAGAGAAAAGTTTGCCATATTTATTGAGAATAATATTTGGACAGAATA 25901
| | || || |||| | | ||| | || ||||| |||| |
Sbjct 2416797 CACC-----------ATAAGTGTCGGCCAA--TCCTGGAGCTTCAT--TTGGAGAGAACA 2416841
Query 25902 AATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCAT 25961
| ||| ||| ||||||| |||||| ||| |||||| |||||||||||||||| ||
Sbjct 2416842 ATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAACAAATCTGGAATCCACAAGGCCG 2416901
Query 25962 AAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAAT 26021
||||||||||| ||||| |||||||| || ||||| |||||| | | || | |||||
Sbjct 2416902 GGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTGATCTCAATGAAAT 2416961
Query 26022 CAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTC 26081
|||| ||||| |||||||||||| | ||| | ||||||| ||| ||| || |
Sbjct 2416962 CAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACCAGGTCTCTTGTTAC 2417021
Query 26082 CACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCA 26140
|||||||||| || || | ||||| | |||||||| | ||| || | |||| |||
Sbjct 2417022 CACCTTGATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCATAGGGA-TAATACCA 2417080
Query 26141 GTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGA 26200
| ||| |||||||| | | ||| | | || || || | ||| | |||| ||
Sbjct 2417081 TTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGAATGTTGTGAATGTGC 2417140
Query 26201 ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATT 26260
| ||| || |||||||| | |||||||| |||||| | | || || ||||
Sbjct 2417141 AAACCAATACCACCAGCACTCTTTGAAATTAAAGCACAAGTTTTTAAGGTGTCATAAATA 2417200
Query 26261 CCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTT 26320
|||| || ||| |||||||| | | || |||||||| || | ||| | | |
Sbjct 2417201 CCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGGA 2417260
Query 26321 GTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTT--CACTCAAAGCTG 26378
|| || | |||||| || || | | |||||||| | |||| || || |||
Sbjct 2417261 GTACCAGCATTAAACAAACAAGGAGAACCATGAGTAAAGTATCTTTGCGACATCAAG--T 2417318
Query 26379 TATAAGTTTCAAGAACTTCATCGATAT-TGTAATTACTA-ACTTCAATAGCTGTTCTTAA 26436
|||||||||||| ||| ||||| | | || || | ||||| ||| |
Sbjct 2417319 TATAAGTTTCAATGACTCTTGGGATATCTCTTCCATGTATAC--CGATAGCAACTCTCAT 2417376
Query 26437 CCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCTCTAATCAAATAAGATTT 26496
|| || || |||| |||| ||| ||| | || ||| |||||| ||| |
Sbjct 2417377 AATCAAATGCTGTGGTCTTTCAGCTACTTTACCAT--TGATACGTAA-CAAATATGATCT 2417433
Query 26497 TTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATC 26535
|||||||||||| || |||||||| | | |||||||||
Sbjct 2417434 TTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAATC 2417472
>seq4
Length=1591921
Score = 158 bits (174), Expect = 6e-34
Identities = 289/422 (68%), Gaps = 6/422 (1%)
Strand=Plus/Minus
Query 25886 ATATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCT 25945
|||| ||| ||||||| ||||||| | | | ||| | | ||| || ||||||
Sbjct 907309 ATATCGGGAGAGAATAACGACCAATCATCTCCTGATTTCACTCTTTGCATGAACAAATCT 907250
Query 25946 GGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTT 26005
|||||||| | |||| || |||||||| | || | |||||| || |||||||| ||
Sbjct 907249 GGAATCCATAACCCATAGAACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTC 907190
Query 26006 TTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTA 26065
| | || || | ||||| || || | ||||| ||||| | |||||| |||||
Sbjct 907189 CTCATATTCAAAATGTCAAAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCT 907130
Query 26066 CCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAAC 26125
||| |||||||||||| ||||| || || |||| ||| || | |||||||| ||||
Sbjct 907129 CCTGGTCTTTTTCCTCCGCCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAAC 907070
Query 26126 ATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTA 26185
|| ||||||| ||| || || || || ||| ||| | |||||| || |||
Sbjct 907069 ATGGGAACTACCCCACCAGATCTCCCATTAGTACTACTAATGTGCGATCCTTGCGCTCTG 907010
Query 26186 ATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT---AGCTGCACAATCT 26242
|||| |||| ||| || || || ||||||| ||| ||||| ||||| ||
Sbjct 907009 ATATTGTGAATATGGATCCCAATCCCACCAGAAGCTTTGGAAATCAAGGCTGC---TTCG 906953
Query 26243 GAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAA 26302
|| ||| | | ||||| | ||| |||| | |||||| ||| || ||||||||
Sbjct 906952 TGAAGTGTTTGATAGATTCCATCAATGGAATCATCCTTCATTGCTAGCAAGAAACAAGAT 906893
Query 26303 GA 26304
||
Sbjct 906892 GA 906891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039975328600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |