Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1 233 1e-56 seq4 158 6e-34 >seq1 Length=2936865 Score = 233 bits (258), Expect = 1e-56 Identities = 994/1539 (65%), Gaps = 65/1539 (4%) Strand=Plus/Plus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 ||||| |||| ||| |||||||| | | ||| |||||| ||||||||||||||||| Sbjct 2415980 AATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCA 2416039 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 || || || || ||||| || || || || ||||||||| || | || | || ||| Sbjct 2416040 TTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTT 2416099 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAAC 25195 |||| ||||| ||| ||| | || ||| |||| ||||||||| | | ||| | || Sbjct 2416100 CTCATACCATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCA-TAATTCTGTAG- 2416157 Query 25196 TCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGATTGATCA 25255 | | || | || | || ||| |||||||||| || | ||| || ||| | Sbjct 2416158 --GCTTTC--TGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGG 2416213 Query 25256 AAAGTTGAATATTTACCTTTTGTTATTGCCATATCTTTTGATTGCTCTAAC-GCAGCATA 25314 | ||| ||| ||||| | | ||||| || | || ||| ||| ||||| | Sbjct 2416214 TAGGTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAA-GCTTCAACAGCAGCGTG 2416272 Query 25315 ATACATATTTTCAAAAATCGCTTTGTTTAAAAACTTAGCTTTTTCTCCATCGAAAGCAAT 25374 ||| ||| |||| ||||| ||||||| |||||| || |||||| | || Sbjct 2416273 ATAGATAGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGAT 2416332 Query 25375 TTCCATTAAGGC--GAACGTATCTGCTAATCCCTGAACTCCTAATCCAACTGGACGATGT 25432 | | | || | ||| | ||| || || || || ||||| ||| ||| ||| | ||| Sbjct 2416333 T--CTTAAAACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGT 2416390 Query 25433 TTATTATTACTTATCTCAGTTTCTGATGTTGGATAGAAATTTGTATCGATCACATTATCT 25492 | | ||| | |||||| ||| | ||| || |||| | || || || | | Sbjct 2416391 CTCATGTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTC 2416450 Query 25493 AGATTCTTTATGGCAAGCTTTGTGTATTTTCT--CAACTCAATAAAGTCAAAATAAGGCT 25550 | || | ||| ||||| ||| || ||||| ||||| | ||| | Sbjct 2416451 AAGTTACGAGTAACAA-CTTTG-GTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGT 2416508 Query 25551 TATCGTTTAT-ATCTCTTTTTACAAATTTAGATAAAGCGATTGATGCTAAATTACAAACA 25609 ||||| |||| || ||||| || ||| || || ||||| || ||||| ||| Sbjct 2416509 ----GTTTACCATCTTGTTCAACAAACGAAGGTAACGCAATCGATGCCAAGTTACAGACA 2416564 Query 25610 GCTTGTTCTTTCCCGTCAGAATATTCATTGATCTCGATACATAAGTTGCTAGATTTGATT 25669 || ||| | | || ||||| || || ||| |||||| ||||||||| Sbjct 2416565 GCAACTTCGTCTGGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATA 2416624 Query 25670 ACTCCATAATTCTTTTGATTA---TTGCATGTATTGACAAT-ATCTTTATATCCTAAAT- 25724 | || ||||||| || || ||| || || |||| ||| ||||| | | || Sbjct 2416625 ATACCTAAATTCTTCTGGTTGGACTTG---GTGTT-ACAAGCATCCTTATA--CAACATG 2416678 Query 25725 -ATGGCGTTCCTGTTTCAATTTGAGATACTAAAATTTTCTCCCAAAGTTCTCTCGCTTTT 25783 |||| || || ||||| |||||| | | || || | ||| | | | || || Sbjct 2416679 AATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTG 2416738 Query 25784 AC--TTTCTTTACGAAGTTACCATCAGAAACAGCTCTTTCGTAAAGTTCAACAAATTCTT 25841 | ||| | ||| | | ||| || || | ||||||| | |||||||| || | Sbjct 2416739 ATGGTTTTTCTACCACG--ACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGT 2416796 Query 25842 GATTTATTTTCTCAGAGAAAAGTTTGCCATATTTATTGAGAATAATATTTGGACAGAATA 25901 | | || || |||| | | ||| | || ||||| |||| | Sbjct 2416797 CACC-----------ATAAGTGTCGGCCAA--TCCTGGAGCTTCAT--TTGGAGAGAACA 2416841 Query 25902 AATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCAT 25961 | ||| ||| ||||||| |||||| ||| |||||| |||||||||||||||| || Sbjct 2416842 ATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAACAAATCTGGAATCCACAAGGCCG 2416901 Query 25962 AAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAAT 26021 ||||||||||| ||||| |||||||| || ||||| |||||| | | || | ||||| Sbjct 2416902 GGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTGATCTCAATGAAAT 2416961 Query 26022 CAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTC 26081 |||| ||||| |||||||||||| | ||| | ||||||| ||| ||| || | Sbjct 2416962 CAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACCAGGTCTCTTGTTAC 2417021 Query 26082 CACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCA 26140 |||||||||| || || | ||||| | |||||||| | ||| || | |||| ||| Sbjct 2417022 CACCTTGATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCATAGGGA-TAATACCA 2417080 Query 26141 GTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGA 26200 | ||| |||||||| | | ||| | | || || || | ||| | |||| || Sbjct 2417081 TTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGAATGTTGTGAATGTGC 2417140 Query 26201 ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATT 26260 | ||| || |||||||| | |||||||| |||||| | | || || |||| Sbjct 2417141 AAACCAATACCACCAGCACTCTTTGAAATTAAAGCACAAGTTTTTAAGGTGTCATAAATA 2417200 Query 26261 CCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTT 26320 |||| || ||| |||||||| | | || |||||||| || | ||| | | | Sbjct 2417201 CCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGGA 2417260 Query 26321 GTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTT--CACTCAAAGCTG 26378 || || | |||||| || || | | |||||||| | |||| || || ||| Sbjct 2417261 GTACCAGCATTAAACAAACAAGGAGAACCATGAGTAAAGTATCTTTGCGACATCAAG--T 2417318 Query 26379 TATAAGTTTCAAGAACTTCATCGATAT-TGTAATTACTA-ACTTCAATAGCTGTTCTTAA 26436 |||||||||||| ||| ||||| | | || || | ||||| ||| | Sbjct 2417319 TATAAGTTTCAATGACTCTTGGGATATCTCTTCCATGTATAC--CGATAGCAACTCTCAT 2417376 Query 26437 CCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCTCTAATCAAATAAGATTT 26496 || || || |||| |||| ||| ||| | || ||| |||||| ||| | Sbjct 2417377 AATCAAATGCTGTGGTCTTTCAGCTACTTTACCAT--TGATACGTAA-CAAATATGATCT 2417433 Query 26497 TTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATC 26535 |||||||||||| || |||||||| | | ||||||||| Sbjct 2417434 TTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAATC 2417472 >seq4 Length=1591921 Score = 158 bits (174), Expect = 6e-34 Identities = 289/422 (68%), Gaps = 6/422 (1%) Strand=Plus/Minus Query 25886 ATATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCT 25945 |||| ||| ||||||| ||||||| | | | ||| | | ||| || |||||| Sbjct 907309 ATATCGGGAGAGAATAACGACCAATCATCTCCTGATTTCACTCTTTGCATGAACAAATCT 907250 Query 25946 GGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTT 26005 |||||||| | |||| || |||||||| | || | |||||| || |||||||| || Sbjct 907249 GGAATCCATAACCCATAGAACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTC 907190 Query 26006 TTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTA 26065 | | || || | ||||| || || | ||||| ||||| | |||||| ||||| Sbjct 907189 CTCATATTCAAAATGTCAAAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCT 907130 Query 26066 CCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAAC 26125 ||| |||||||||||| ||||| || || |||| ||| || | |||||||| |||| Sbjct 907129 CCTGGTCTTTTTCCTCCGCCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAAC 907070 Query 26126 ATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTA 26185 || ||||||| ||| || || || || ||| ||| | |||||| || ||| Sbjct 907069 ATGGGAACTACCCCACCAGATCTCCCATTAGTACTACTAATGTGCGATCCTTGCGCTCTG 907010 Query 26186 ATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT---AGCTGCACAATCT 26242 |||| |||| ||| || || || ||||||| ||| ||||| ||||| || Sbjct 907009 ATATTGTGAATATGGATCCCAATCCCACCAGAAGCTTTGGAAATCAAGGCTGC---TTCG 906953 Query 26243 GAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAA 26302 || ||| | | ||||| | ||| |||| | |||||| ||| || |||||||| Sbjct 906952 TGAAGTGTTTGATAGATTCCATCAATGGAATCATCCTTCATTGCTAGCAAGAAACAAGAT 906893 Query 26303 GA 26304 || Sbjct 906892 GA 906891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039975328600