Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1 150 2e-31 >seq1 Length=2936865 Score = 150 bits (166), Expect = 2e-31 Identities = 203/283 (72%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 ||||| || | |||||| | | || || || || | || |||||| ||||| || || Sbjct 1429659 CCATGGTAAACAGCATAGTTTGCGGAAATGTTGGCCAACAATGCTTGAGCTGTACATATA 1429718 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 || || ||||| ||||| | |||||||| ||||||||||| | |||||||| | Sbjct 1429719 TTTGAAGTGGCTTTCTCTCTCTTGATATGCTGTTCTCTAGTTTGCAAGGCTAATCTCAAA 1429778 Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451 || || |||||| || ||| ||| || |||||||| ||||| || ||||| | Sbjct 1429779 GCCGGTTTGCCTAATCTATCCTTTGAGACTCCGACAATTCTTCCAGGGATTTTTCTAGCA 1429838 Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511 ||||| | || || | |||||| ||||| |||||||| |||||||| | ||| | ||| Sbjct 1429839 TACTTTTGTGAGGTAGAAAAGAAGGCAGCGTGAGGACCACCGTATCCAAAAGGTACACCG 1429898 Query 139512 AACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCAC 139554 || ||||| | |||| | ||||||||| ||| | |||| Sbjct 1429899 AATCTTTGTGAAGTACCCAATGCAATATCAGCTCCAAATTCAC 1429941 Score = 114 bits (126), Expect = 1e-20 Identities = 338/503 (67%), Gaps = 25/503 (5%) Strand=Plus/Plus Query 138201 CCAGGACCTCCACCTCCATGTGG-AATACAGAATGTCTTATGTAAATTTAGATGACATAC 138259 || || || ||||| ||||| ||| || ||||| || || | ||| | ||||||||| Sbjct 1428576 CCGGGTCCACCACCACCATGACTCAATGCA-AATGTTTTGTGAATATTCAAATGACATAC 1428634 Query 138260 ATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATC 138319 ||| ||||| | |||| || || || ||| || |||||||| | ||| |||||||| Sbjct 1428635 ATCAGCACCCAAATCACCAGGAGATGTTAAACCAACTTGTGCATTCATATTAGCACCATC 1428694 Query 138320 GAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC-TGTCTGATGTTTGTTT 138378 | |||||| || || || | |||||| || | | ||| | | | ||| || || Sbjct 1428695 CAAGTATACCAACCCGCCGTTTTGATGAACAATATCA-ATAGCTTCTTTGACACCTGGTT 1428753 Query 138379 CAAATACACCATGAGTCGATGGATATGTAATCATAAT---ACA-TGAGAGTTCAAATGTA 138434 |||| | |||| ||| || ||||| || ||||| || ||| | | ||||| Sbjct 1428754 CAAACAATCCATAAGTTGAAGGATAAGTGATCATGATGGAACACAAATTGGCGGAATGTT 1428813 Query 138435 TTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATCATCATCACACTTG 138494 || || || || ||| || | ||| || | ||| ||| |||| || ||| ||| Sbjct 1428814 TTTCTGCTT--TTGCTT-TC-AAATCATTCAAGTCAATGGAACCATTGTCTAAACATTTG 1428869 Query 138495 ACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGAC 138554 || |||||||||| ||| ||| |||| ||||||||||| ||||| || || Sbjct 1428870 ACTGGAACAACTTTCAATCCACACATTGCTGCTGAGGCAGGATTAGTACCATGAGCAGAA 1428929 Query 138555 TCTGGTATCAGACATACATTTCTTT-----TA-TCATCTCCTGATCCTTGATGATATGCT 138608 | || || || || | ||||||| || ||| ||| |||| ||| |||||| | Sbjct 1428930 ACAGGAATAAGGCAAATGTTTCTTTGTTCGTATTCACCTCTTGAT--TTG-TGATATTGT 1428986 Query 138609 TGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGG-TTGTAATGATA- 138666 || | ||| ||| | ||| ||||| || | || | ||| || || | | || Sbjct 1428987 CTAATCAATGACAATCCAGTATATTCACCTTGAGCACCAGAGTTTGGCATGGA--GGTAG 1429044 Query 138667 TAGAATCAAAACCTGTGATATCA 138689 ||| ||||||||| ||||||||| Sbjct 1429045 TAGCATCAAAACCGGTGATATCA 1429067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998342100160