Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 257 2e-63 seq2 86.0 7e-12 >seq1 Length=2936865 Score = 257 bits (284), Expect = 2e-63 Identities = 838/1288 (65%), Gaps = 29/1288 (2%) Strand=Plus/Minus Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 || ||||||||||| |||| ||| || ||||| ||| ||| | | || | || || Sbjct 2417274 TTTAATGCTGGTACTCCAAAACCACAAATGTCATCTTGTTTCTTGGTTGCAATGAAAGAA 2417215 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGT-GTGCGCAAATCTCAAAGTGGGC 75447 || || || | ||||| |||| || |||| | | |||| ||| |||||| | || Sbjct 2417214 GATTCTATTGAAGGTATTTATGACAC-CTTAAAAACTTGTGCTTTAATTTCAAAGAGTGC 2417156 Query 75448 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGAC 75507 ||| |||||||| ||||||| || | | | ||| | || |||| || || Sbjct 2417155 TGGTGGTATTGGTTTGCACATTCACAACATTCGTTCCACTGGTGCTTATATTGCTGGTAC 2417096 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 ||| ||| || |||||||||| || ||| |||| || || ||| ||| || || || Sbjct 2417095 AAACGGTACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACACTGCCCGTTA 2417036 Query 75568 TGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATG 75621 ||| |||||| || | |||| | || | | || | || | |||||||| Sbjct 2417035 TGTTGATCAAGGTGG---TAACAAGAGACCTGGTGCTTTTGCTTTGTATCTTGAACCATG 2416979 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||| |||||| | || ||| ||||| | || ||||| ||| | ||||| | | Sbjct 2416978 GCACAGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGAAATTAG 2416919 Query 75682 GTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 ||||||| | || | || ||||||||||||| | || |||||| | ||||| | Sbjct 2416918 AGCTAGAGATTTATTCCCGGCCTTGTGGATTCCAGATTTGTTTATGAAGAGAGTTGAACA 2416859 Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 |||| | ||| | | |||| |||| | | || ||||| | ||||| | || Sbjct 2416858 AAATGGTGAGTGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCCGACACTTATGG 2416799 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 ||| ||||||| | | ||| ||| |||||| ||| ||| | | | || | Sbjct 2416798 TGACGAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAAAACCAT 2416739 Query 75862 ACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 | || | | | ||| ||| | | || | || | || || || ||||| || |||| Sbjct 2416738 -CAAGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGTACCCCAT 2416680 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 ||| | || |||||||||||||||| ||| ||||| |||||||| || | |||| Sbjct 2416679 TCATGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAGAAGAATTTAGGTATTATCA 2416620 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 | || || | || |||||| | || ||| ||| | || || ||||| | Sbjct 2416619 AATCTTCCAACTTGTGTTGTGAAATTGTCGAATACTCAGCTCCAGACGAAGTTGCTGTCT 2416560 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCG-CACTTTTGAT 76099 | || |||||||| || || | || || ||| | |||| | ||| ||| | Sbjct 2416559 GTAACTTGGCATCGATTGCGTTACCTTCGTTTGTTGAACAAGATGGTAAACACGCTTGGT 2416500 Query 76100 -----TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 | ||| || | ||||| | || || ||||||| || | ||| |||||| Sbjct 2416499 ACAACTTTGACAAGTTGCATGATGTTACCAAAGTTGTTACTCGTAACTTGAACAGAGTCA 2416440 Query 76155 TTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 | ||||| |||| ||| || || ||| ||| | || ||||| ||| ||||||||| Sbjct 2416439 TAGACAGGAATTATTACCCAGTCCCTGAAGCTGAG---AAATCTAACATGAGACACAGAC 2416383 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTG 76271 | |||| ||||| || |||||| | || |||| || || | | | || ||| | Sbjct 2416382 CAATTGCATTGGGAGTCCAAGGTTTGGCTGATGCCTTCATGGTTTTAAGAATCGGATTCG 2416323 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 |||| | ||||| | || | || || || || ||||| || |||||||| | Sbjct 2416322 ATTCCCAAGAAGCTAGAGAATTAAACATTCAAATTTTCGAAACTATCTATCACGCTGCTG 2416263 Query 76332 TGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTC 76391 | || || | ||||||||| ||| ||||| | ||||| || | | || || | Sbjct 2416262 TTGAAGCTTCTATTGAATTGGCACAAGAAGAAGGTCCTTATGAAACCTACCAAGGATCAC 2416203 Query 76392 CCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG 76451 | || |||||||| || | || | ||| ||||||| | || || | | || || | Sbjct 2416202 CAGCATCCCAAGGTTTGTTACAATATGACTTGTGGGACAGA-AAGCCTA-CAGAATTATG 2416145 Query 76452 --ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509 | ||||||| | || || | | | ||| | | ||| | | ||| | Sbjct 2416144 GGATTGGGATGAATTGAAAAAAAAACTTGCCAAACATGGTATGAGAAACTCTTTGTTGGT 2416085 Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569 ||| ||||||||||| || ||||| ||||||| |||||||| |||||||| |||||||| Sbjct 2416084 GGCTCCAATGCCAACCGCTTCCACATCACAAATTTTGGGTAACAATGAATGTTTTGAACC 2416025 Query 76570 ATACACAACAAACATCTACCTGAGAAGA 76597 |||||| | ||||||||| |||||| Sbjct 2416024 ATACACTTCGAACATCTACTCCAGAAGA 2415997 Score = 91.5 bits (100), Expect = 2e-13 Identities = 290/443 (65%), Gaps = 24/443 (5%) Strand=Plus/Plus Query 64798 ATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAATTTT 64857 ||| |||| |||||||| | |||||||| |||||| |||||| | | || ||| Sbjct 2539553 ATCTTGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAGAACTTGGTGGAAAACTTT 2539612 Query 64858 GCGGATGAAGTGCAGATAAGCGAAGCGCGCTCATTCTACGCATATCAATGCCATAATG-A 64916 | | |||||| || || ||||| || ||||||| || ||| || ||| | Sbjct 2539613 TCAGCTGAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATT-ATGATGGA 2539671 Query 64917 AATGGTTCATGGCGAAACATATTCAAAATTGATTGACAAATACATTAAGGATGGATCTGA 64976 || |||| ||||| || ||| ||||||||| | || || |||||| | Sbjct 2539672 AAACATTCACTCAGAAACTTACTCATTATTGATTGAAACTTATATCAAGGATCCA----- 2539726 Query 64977 AAAGAAGCAG-----TTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCG 65031 |||||||| | ||||| | || || |||| | ||| ||| | |||||||| Sbjct 2539727 AAAGAAGCTGACTTCTTATTCAATGCTATTGAAACCATTCCACAAATTAAAAAGAAGGCT 2539786 Query 65032 AAATGGGCAATGAAATGGTTTGACACAAAGTCTC----GC-TCCTTCGCCGAGCGCCTTT 65086 | ||||| || | |||| | | ||| || || | || |||||| | | Sbjct 2539787 GATTGGGCCATCAGATGGAT-----CCAAGATTCCGAGGCATTGTTTGCCGAGAGATTGG 2539841 Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGG 65145 |||| || || ||| || |||||||| ||| || ||||| ||| |||||| ||| Sbjct 2539842 TTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATT-TGCATCTATTTTCTGG 2539900 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| | ||| | |||||||| || ||||| || ||| | |||| || || Sbjct 2539901 TTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGAC 2539960 Query 65206 GAGGGTCTCCACCAGGAGTTTGC 65228 || ||| | ||| || ||||| Sbjct 2539961 GAAGGTTTACACACTGACTTTGC 2539983 Score = 87.8 bits (96), Expect = 2e-12 Identities = 218/326 (67%), Gaps = 9/326 (3%) Strand=Plus/Minus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| || ||||| || || || |||| | ||| || || || || || || | Sbjct 2719690 TGGTGCAAAAATCCCTCGCGGTGCTATTCTTTCAGGTCCTCCGGGAACAGGTAAAACATT 2719631 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAA 175393 ||||| ||||| || |||||| | ||| || || || | || |||| | Sbjct 2719630 ACTCGCTAAAGCCACAGCTGGTGAAGCTGGTGTTCCGTTTTATTCTGTT-TCTGGTTCGG 2719572 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | ||||| || |||||||||||||| |||||| | | || || ||| | || ||| | Sbjct 2719571 AATTTGTTGAAATGTTTGTTGGTGTAGGTGCCTCACGTGTACGTGATTTGTTCAAAACTG 2719512 Query 175454 CCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAAC 175513 | | |||||| |||| ||||| || ||||||| |||||||| | || |||||| Sbjct 2719511 CAAGAGAAAATGCTCCATCGATTGTGTTTGTTGATGAAATTGATGCAATTGGTAAGCAAA 2719452 Query 175514 GCAGCGCTGGTGGTATGCCA-----GCAAATGACGAGAGAGAACAAACAATTAATCAACT 175568 | | | || | |||| | || || || ||||||||| ||| | |||||| | Sbjct 2719451 G-ATCAAAGG-GAAATGCAACAGGCGCCAACGATGAGAGAGAAACTACATTGAATCAATT 2719394 Query 175569 ACTCACCGAGATGGATGGCTTTGACA 175594 | | || ||||| || ||||||| Sbjct 2719393 ATTGGTTGAAATGGACGGATTTGACA 2719368 >seq2 Length=2433673 Score = 86.0 bits (94), Expect = 7e-12 Identities = 174/257 (68%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 27781 CCAGTAGATCCAAATCCACCCGCACCTCTCTCTGTCTCT-TCAA-----GAACACCAATT 27834 ||||| ||||||||||| || |||| | || || | | ||| | | ||||| Sbjct 2122954 CCAGTCGATCCAAATCCTCCTTCACCACGTTCAGTATTTGACAATCCTTCCAAATCAATT 2123013 Query 27835 TCCTGCACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTC 27894 |||| || ||||| || || | || | || | ||| || || | ||| || || Sbjct 2123014 TCCTCCAAATCGGCATTTACAATTCTTTCCAAAACTAATTGAGCAATTCTATCTCCCTTT 2123073 Query 27895 TTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAG 27954 || | ||||| | ||| ||| ||||| || | || ||||| |||||||| || Sbjct 2123074 TTAATTTCAAAATGTTTATCTGAATGATTAAACAAGACAACTTTAACTTCACCCCGGTAA 2123133 Query 27955 TCGGGATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGT 28014 || | |||||| || || ||||| | ||| ||||| || ||||| ||||| || ||| Sbjct 2123134 TCAGCATCAATTACCCCAGCACCGGTTGAAATTCCATGTTTGACAGCAAGACCTGAACGT 2123193 Query 28015 GGTGCAACACGACCATA 28031 || || ||||| ||||| Sbjct 2123194 GGAGCTACACGTCCATA 2123210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569540343040