Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1 253 3e-62
seq2 122 1e-22
>seq1
Length=2936865
Score = 253 bits (280), Expect = 3e-62
Identities = 582/863 (67%), Gaps = 36/863 (4%)
Strand=Plus/Minus
Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919
|||||||| || || ||| | || || |||||||| ||||| || |||| || ||
Sbjct 2540281 AGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAAAT 2540222
Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTA----ATT 17975
| ||||||||| |||||||||||| || ||| ||||| ||||| |
Sbjct 2540221 GTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTT----TATTACCCAAAG 2540166
Query 17976 CGTATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATAC 18035
| ||||||||||| || |||||||| |||||||| |||| || | ||||||||||
Sbjct 2540165 CAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATAC 2540106
Query 18036 CTAGTAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTT 18095
| | || || | |||| ||||||| ||| |||||||| || || ||||||| ||
Sbjct 2540105 CCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAG 2540046
Query 18096 TTATTATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGT-GATTATAATATAAT 18154
| || || || || ||| || | | | | || ||| || | |||||
Sbjct 2540045 TAATAATTCTTTCAAC----GATCTTTGGATCTGGTCTATGTTGTAAATGGGCAAATAAT 2539990
Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214
||||| ||||| ||||||||||||||||| || | | ||||||||||| || |||
Sbjct 2539989 AAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTT 2539930
Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGA---AACTACTAGAA 18271
|| || ||||| | ||||||||| || | ||| || || ||||| | ||| ||| |||
Sbjct 2539929 AATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACT-GAA 2539871
Query 18272 AAGAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTAT 18329
| || ||||| ||||| ||| ||||| || | ||||| || ||||| | || |
Sbjct 2539870 A--AAGATACCTTCAACAGCA-GCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGA 2539814
Query 18330 TGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTA 18389
|| | |||||| | ||||| || | | || || || | || |
Sbjct 2539813 ATCT-TGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAA 2539755
Query 18390 TAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAG 18449
||||||| || || || |||||| | ||| || |||||||| || || || || |
Sbjct 2539754 TAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATG 2539695
Query 18450 AATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCT 18509
| || |||| || || ||| ||||||| || || || | || || ||| |||| |
Sbjct 2539694 AGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTT 2539635
Query 18510 CGGGATATTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCA 18568
| ||| ||||| || ||| |||| |||| ||||| ||||||||||| ||||| ||
Sbjct 2539634 CTGGAATTTGAACTTCAGCT-GAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCG 2539576
Query 18569 GCAGATGCGAAAAATGCCAAAACATATT----TAATGAAATGTTTTTCATTATCCTTGAG 18624
| | || || || ||||| | | || ||| |||| | ||||||||| || |
Sbjct 2539575 GATGCGGCAAAGAAAGCCAAGA-TTCTTCCGATAAAGAAACG---TTCATTATCGTTTAA 2539520
Query 18625 ATTGT---TCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGA 18681
|| | |||| |||| | |||||| || ||| | |||||| | |||||| || ||
Sbjct 2539519 TTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGA 2539460
Query 18682 TGATTCGGCCTGTTTGTACATTT 18704
| || || | ||||||||||
Sbjct 2539459 AGCCTCAGCTTTCTTGTACATTT 2539437
>seq2
Length=2433673
Score = 122 bits (134), Expect = 1e-22
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| || | ||||| || || || || ||||| || || ||||| |||
Sbjct 20986 AAAATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACTATCACTTTGGAAGTTGAATCC 21045
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | |||| || || || ||| || ||||| ||||| || || || |||||
Sbjct 21046 TCCGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAGGGTATTCCACCAGAC 21105
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| ||||| || | ||||| ||||| ||||| || ||
Sbjct 21106 CAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCCGACTAC 21165
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || ||||| | || | || || ||||| ||||| ||||| ||||
Sbjct 21166 AACATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTG 21217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871926812800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |